RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
CBX3P1-201ENST00000325243 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
CBX3P1-201ENST00000325243 KIF12Q96FN5 646 aa11.96□□□□□ -0.49
CBX3P1-201ENST00000325243 ASTLQ6HA08 431 aaPredicted RBP11.94□□□□□ -0.5
CBX3P1-201ENST00000325243 POTEB2H3BUK9 544 aa11.93□□□□□ -0.5
CBX3P1-201ENST00000325243 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
CBX3P1-201ENST00000325243 MAP3K13O43283 966 aa11.89□□□□□ -0.51
CBX3P1-201ENST00000325243 NUBP1P53384 320 aa11.89□□□□□ -0.51
CBX3P1-201ENST00000325243 TRPC6Q9Y210 931 aa11.88□□□□□ -0.51
CBX3P1-201ENST00000325243 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
CBX3P1-201ENST00000325243 ATN1P54259 1190 aaPredicted RBP11.85□□□□□ -0.51
CBX3P1-201ENST00000325243 OTUD5Q96G74 571 aa11.85□□□□□ -0.51
CBX3P1-201ENST00000325243 METRNQ9UJH8 293 aa11.85□□□□□ -0.51
CBX3P1-201ENST00000325243 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
CBX3P1-201ENST00000325243 BMP2KQ9NSY1 1161 aaPredicted RBP11.83□□□□□ -0.52
CBX3P1-201ENST00000325243 C7P10643 843 aa11.81□□□□□ -0.52
CBX3P1-201ENST00000325243 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
CBX3P1-201ENST00000325243 POTEJP0CG39 1038 aa11.77□□□□□ -0.53
CBX3P1-201ENST00000325243 TIE1P35590 1138 aa11.77□□□□□ -0.53
CBX3P1-201ENST00000325243 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
CBX3P1-201ENST00000325243 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
CBX3P1-201ENST00000325243 TTLL13PA6NNM8 815 aa11.74□□□□□ -0.53
CBX3P1-201ENST00000325243 SGIP1Q9BQI5 828 aa11.74□□□□□ -0.53
CBX3P1-201ENST00000325243 POTEFA5A3E0 1075 aa11.72□□□□□ -0.53
CBX3P1-201ENST00000325243 IFNL1Q8IU54 200 aa11.71□□□□□ -0.53
CBX3P1-201ENST00000325243 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
CBX3P1-201ENST00000325243 DCAF8Q5TAQ9 597 aa11.67□□□□□ -0.54
CBX3P1-201ENST00000325243 TRIM35Q9UPQ4 493 aa11.66□□□□□ -0.54
CBX3P1-201ENST00000325243 COLQQ9Y215 455 aaPredicted RBP11.65□□□□□ -0.54
CBX3P1-201ENST00000325243 PYGBP11216 843 aa11.64□□□□□ -0.55
CBX3P1-201ENST00000325243 KLHL34Q8N239 644 aa11.62□□□□□ -0.55
CBX3P1-201ENST00000325243 MAMSTRQ6ZN01 415 aa11.61□□□□□ -0.55
CBX3P1-201ENST00000325243 TMEM106CQ9BVX2 250 aa11.61□□□□□ -0.55
CBX3P1-201ENST00000325243 IER5LQ5T953 404 aa11.59□□□□□ -0.55
CBX3P1-201ENST00000325243 SEC24BO95487 1268 aa11.58□□□□□ -0.56
CBX3P1-201ENST00000325243 SCUBE2Q9NQ36 999 aa11.57□□□□□ -0.56
CBX3P1-201ENST00000325243 PCDHB8Q9UN66 801 aa11.56□□□□□ -0.56
CBX3P1-201ENST00000325243 GSE1Q14687 1217 aa11.52□□□□□ -0.57
CBX3P1-201ENST00000325243 IFNLR1Q8IU57 520 aaPredicted RBP11.51□□□□□ -0.57
CBX3P1-201ENST00000325243 POTEMA6NI47 508 aa11.49□□□□□ -0.57
CBX3P1-201ENST00000325243 IRX5P78411 483 aaPredicted RBP11.48□□□□□ -0.57
CBX3P1-201ENST00000325243 LCE2DQ5TA82 110 aaPredicted RBP11.48□□□□□ -0.57
CBX3P1-201ENST00000325243 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
CBX3P1-201ENST00000325243 PLCG2P16885 1265 aa11.46□□□□□ -0.57
CBX3P1-201ENST00000325243 CHRM1P11229 460 aaPredicted RBP11.44□□□□□ -0.58
CBX3P1-201ENST00000325243 ZNF467Q7Z7K2 595 aaPredicted RBP11.44□□□□□ -0.58
CBX3P1-201ENST00000325243 SPOCK2Q92563 424 aa11.44□□□□□ -0.58
CBX3P1-201ENST00000325243 FAM163AQ96GL9 167 aaPredicted RBP11.42□□□□□ -0.58
CBX3P1-201ENST00000325243 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
CBX3P1-201ENST00000325243 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
CBX3P1-201ENST00000325243 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
CBX3P1-201ENST00000325243 PSEN1P49768 467 aa11.36□□□□□ -0.59
CBX3P1-201ENST00000325243 SLAIN1Q8ND83 568 aa11.36□□□□□ -0.59
CBX3P1-201ENST00000325243 PDCD7Q8N8D1 485 aaKnown RBP11.33□□□□□ -0.6
CBX3P1-201ENST00000325243 PDAP1Q13442 181 aaKnown RBP11.31□□□□□ -0.6
CBX3P1-201ENST00000325243 GOLGA2Q08379 1002 aa11.3□□□□□ -0.6
CBX3P1-201ENST00000325243 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
CBX3P1-201ENST00000325243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.61
CBX3P1-201ENST00000325243 PCDH10Q9P2E7 1040 aa11.25□□□□□ -0.61
CBX3P1-201ENST00000325243 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.24□□□□□ -0.61
CBX3P1-201ENST00000325243 ST18O60284 1047 aa11.23□□□□□ -0.61
CBX3P1-201ENST00000325243 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
CBX3P1-201ENST00000325243 CABP2Q9NPB3 220 aa11.23□□□□□ -0.61
CBX3P1-201ENST00000325243 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
CBX3P1-201ENST00000325243 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
CBX3P1-201ENST00000325243 C3orf67Q6ZVT6 689 aa11.18□□□□□ -0.62
CBX3P1-201ENST00000325243 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
CBX3P1-201ENST00000325243 RNF25Q96BH1 459 aaPredicted RBP11.14□□□□□ -0.63
CBX3P1-201ENST00000325243 CDAN1Q8IWY9 1227 aa11.12□□□□□ -0.63
CBX3P1-201ENST00000325243 SNPHO15079 494 aa11.11□□□□□ -0.63
CBX3P1-201ENST00000325243 EFCAB3Q8N7B9 438 aa11.11□□□□□ -0.63
CBX3P1-201ENST00000325243 TMEM121BQ9BXQ6 578 aaPredicted RBP11.09□□□□□ -0.63
CBX3P1-201ENST00000325243 RIOK3O14730 519 aaKnown RBP11.08□□□□□ -0.64
CBX3P1-201ENST00000325243 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
CBX3P1-201ENST00000325243 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
CBX3P1-201ENST00000325243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.05□□□□□ -0.64
CBX3P1-201ENST00000325243 ZFP91Q96JP5 570 aaPredicted RBP11.05□□□□□ -0.64
CBX3P1-201ENST00000325243 G3V3G9 751 aa11.02□□□□□ -0.65
CBX3P1-201ENST00000325243 VGFO15240 615 aaPredicted RBP11.02□□□□□ -0.65
CBX3P1-201ENST00000325243 MS4A4AQ96JQ5 239 aa10.98□□□□□ -0.65
CBX3P1-201ENST00000325243 SOX12O15370 315 aa10.96□□□□□ -0.65
CBX3P1-201ENST00000325243 HOXB3P14651 431 aaPredicted RBP10.96□□□□□ -0.65
CBX3P1-201ENST00000325243 EMP3P54852 163 aa10.96□□□□□ -0.65
CBX3P1-201ENST00000325243 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.65
CBX3P1-201ENST00000325243 MICALL2Q8IY33 904 aa10.95□□□□□ -0.66
CBX3P1-201ENST00000325243 POTEB3A0JP26 581 aa10.93□□□□□ -0.66
CBX3P1-201ENST00000325243 POTEBQ6S5H4 581 aa10.93□□□□□ -0.66
CBX3P1-201ENST00000325243 TMEM92Q6UXU6 159 aa10.93□□□□□ -0.66
CBX3P1-201ENST00000325243 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
CBX3P1-201ENST00000325243 FAM205CA6NFA0 338 aa10.89□□□□□ -0.67
CBX3P1-201ENST00000325243 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
CBX3P1-201ENST00000325243 ECM2O94769 699 aaPredicted RBP10.88□□□□□ -0.67
CBX3P1-201ENST00000325243 PKD2Q13563 968 aa10.88□□□□□ -0.67
CBX3P1-201ENST00000325243 FBXO22Q8NEZ5 403 aa10.87□□□□□ -0.67
CBX3P1-201ENST00000325243 STK24Q9Y6E0 443 aa10.87□□□□□ -0.67
CBX3P1-201ENST00000325243 SPNS2Q8IVW8 549 aa10.86□□□□□ -0.67
CBX3P1-201ENST00000325243 HOXB1P14653 301 aaPredicted RBP10.85□□□□□ -0.67
CBX3P1-201ENST00000325243 DOK7Q18PE1 504 aa10.85□□□□□ -0.67
CBX3P1-201ENST00000325243 ZNF710Q8N1W2 664 aa10.85□□□□□ -0.67
CBX3P1-201ENST00000325243 TAOK2Q9UL54 1235 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms