RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 TNNT2P45379 298 aaPredicted RBP11.96□□□□□ -0.5
SSBP2-201ENST00000320672 TONSLQ96HA7 1378 aa11.95□□□□□ -0.5
SSBP2-201ENST00000320672 MYO15BQ96JP2 1530 aa11.94□□□□□ -0.5
SSBP2-201ENST00000320672 LAS1LQ9Y4W2 734 aaKnown RBP11.91□□□□□ -0.5
SSBP2-201ENST00000320672 SOX12O15370 315 aa11.9□□□□□ -0.5
SSBP2-201ENST00000320672 WDR43Q15061 677 aaKnown RBP eCLIP11.89□□□□□ -0.51
SSBP2-201ENST00000320672 NCLP19338 710 aaKnown RBP11.88□□□□□ -0.51
SSBP2-201ENST00000320672 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
SSBP2-201ENST00000320672 SIN3AQ96ST3 1273 aa11.85□□□□□ -0.51
SSBP2-201ENST00000320672 SUPT16HQ9Y5B9 1047 aaKnown RBP11.85□□□□□ -0.51
SSBP2-201ENST00000320672 SPRYD3Q8NCJ5 442 aa11.84□□□□□ -0.51
SSBP2-201ENST00000320672 NPM1P06748 294 aaKnown RBP eCLIP11.82□□□□□ -0.52
SSBP2-201ENST00000320672 NCBP3Q53F19 620 aaKnown RBP11.82□□□□□ -0.52
SSBP2-201ENST00000320672 ARID4BQ4LE39 1312 aaPredicted RBP11.82□□□□□ -0.52
SSBP2-201ENST00000320672 ANP32BQ92688 251 aaKnown RBP11.81□□□□□ -0.52
SSBP2-201ENST00000320672 UPF2Q9HAU5 1272 aaKnown RBP11.81□□□□□ -0.52
SSBP2-201ENST00000320672 RGS3P49796 1198 aa11.8□□□□□ -0.52
SSBP2-201ENST00000320672 SAFB2Q14151 953 aaKnown RBP eCLIP11.8□□□□□ -0.52
SSBP2-201ENST00000320672 CC2D1BQ5T0F9 858 aaKnown RBP11.8□□□□□ -0.52
SSBP2-201ENST00000320672 MLECQ14165 292 aa11.77□□□□□ -0.52
SSBP2-201ENST00000320672 FRAT1Q92837 279 aaPredicted RBP11.77□□□□□ -0.53
SSBP2-201ENST00000320672 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
SSBP2-201ENST00000320672 PPP1R15AO75807 674 aaPredicted RBP11.76□□□□□ -0.53
SSBP2-201ENST00000320672 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
SSBP2-201ENST00000320672 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.74□□□□□ -0.53
SSBP2-201ENST00000320672 B4GALNT3Q6L9W6 998 aa11.74□□□□□ -0.53
SSBP2-201ENST00000320672 ARID3AQ99856 593 aa11.73□□□□□ -0.53
SSBP2-201ENST00000320672 TSPY4P0CV99 314 aa11.73□□□□□ -0.53
SSBP2-201ENST00000320672 TSPY10P0CW01 314 aa11.73□□□□□ -0.53
SSBP2-201ENST00000320672 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
SSBP2-201ENST00000320672 APBB1O00213 710 aa11.71□□□□□ -0.53
SSBP2-201ENST00000320672 FOXD1Q16676 465 aa11.71□□□□□ -0.54
SSBP2-201ENST00000320672 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
SSBP2-201ENST00000320672 ANO8Q9HCE9 1232 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-201ENST00000320672 U2SURPO15042 1029 aaKnown RBP11.67□□□□□ -0.54
SSBP2-201ENST00000320672 MTUS2Q5JR59 1369 aa11.66□□□□□ -0.54
SSBP2-201ENST00000320672 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.54
SSBP2-201ENST00000320672 NUTM2DQ5VT03 806 aaPredicted RBP11.65□□□□□ -0.54
SSBP2-201ENST00000320672 SCRIBQ14160 1630 aa11.65□□□□□ -0.55
SSBP2-201ENST00000320672 MYH16Q9H6N6 1097 aa11.64□□□□□ -0.55
SSBP2-201ENST00000320672 CARD11Q9BXL7 1154 aa11.63□□□□□ -0.55
SSBP2-201ENST00000320672 STK26Q9P289 416 aa11.62□□□□□ -0.55
SSBP2-201ENST00000320672 DCAF1Q9Y4B6 1507 aa11.62□□□□□ -0.55
SSBP2-201ENST00000320672 PTMAP06454 111 aaKnown RBP11.61□□□□□ -0.55
SSBP2-201ENST00000320672 DNTTIP2Q5QJE6 756 aaKnown RBP11.61□□□□□ -0.55
SSBP2-201ENST00000320672 NPHP1O15259 732 aa11.61□□□□□ -0.55
SSBP2-201ENST00000320672 ERICH6BQ5W0A0 696 aa11.6□□□□□ -0.55
SSBP2-201ENST00000320672 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
SSBP2-201ENST00000320672 ZNF330Q9Y3S2 320 aaPredicted RBP11.6□□□□□ -0.55
SSBP2-201ENST00000320672 ZCCHC6Q5VYS8 1495 aaKnown RBP11.6□□□□□ -0.55
SSBP2-201ENST00000320672 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
SSBP2-201ENST00000320672 FTSJ3Q8IY81 847 aaKnown RBP11.59□□□□□ -0.55
SSBP2-201ENST00000320672 NAP1L5Q96NT1 182 aaPredicted RBP11.59□□□□□ -0.55
SSBP2-201ENST00000320672 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
SSBP2-201ENST00000320672 NUTM2FA1L443 756 aa11.57□□□□□ -0.56
SSBP2-201ENST00000320672 POGKQ9P215 609 aa11.56□□□□□ -0.56
SSBP2-201ENST00000320672 FOXD4L1Q9NU39 408 aa11.56□□□□□ -0.56
SSBP2-201ENST00000320672 CDK11BP21127 795 aaKnown RBP11.56□□□□□ -0.56
SSBP2-201ENST00000320672 OS9Q13438 667 aaPredicted RBP11.55□□□□□ -0.56
SSBP2-201ENST00000320672 ISY1Q9ULR0 285 aaKnown RBP11.55□□□□□ -0.56
SSBP2-201ENST00000320672 PDE4CQ08493 712 aa11.55□□□□□ -0.56
SSBP2-201ENST00000320672 KNSTRNQ9Y448 316 aa11.55□□□□□ -0.56
SSBP2-201ENST00000320672 GZF1Q9H116 711 aaPredicted RBP11.54□□□□□ -0.56
SSBP2-201ENST00000320672 DCAF11Q8TEB1 546 aa11.53□□□□□ -0.56
SSBP2-201ENST00000320672 CFDP1Q9UEE9 299 aaPredicted RBP11.52□□□□□ -0.56
SSBP2-201ENST00000320672 PLEKHD1A6NEE1 506 aa11.52□□□□□ -0.57
SSBP2-201ENST00000320672 NOL8Q76FK4 1167 aaKnown RBP11.52□□□□□ -0.57
SSBP2-201ENST00000320672 CLSTN1O94985 981 aa11.51□□□□□ -0.57
SSBP2-201ENST00000320672 CCDC9Q9Y3X0 531 aaKnown RBP11.51□□□□□ -0.57
SSBP2-201ENST00000320672 ANP32EQ9BTT0 268 aa11.5□□□□□ -0.57
SSBP2-201ENST00000320672 GGT6Q6P531 493 aa11.5□□□□□ -0.57
SSBP2-201ENST00000320672 MAPK8IP3Q9UPT6 1336 aa11.49□□□□□ -0.57
SSBP2-201ENST00000320672 PAK3O75914 559 aaPredicted RBP11.49□□□□□ -0.57
SSBP2-201ENST00000320672 HSP90AB1P08238 724 aaKnown RBP11.49□□□□□ -0.57
SSBP2-201ENST00000320672 CLIP1P30622 1438 aa11.49□□□□□ -0.57
SSBP2-201ENST00000320672 FOXD4L5Q5VV16 416 aaPredicted RBP11.49□□□□□ -0.57
SSBP2-201ENST00000320672 FOXD4L4Q8WXT5 416 aaPredicted RBP11.49□□□□□ -0.57
SSBP2-201ENST00000320672 FGD1P98174 961 aa11.48□□□□□ -0.57
SSBP2-201ENST00000320672 BAZ1BQ9UIG0 1483 aaKnown RBP11.48□□□□□ -0.57
SSBP2-201ENST00000320672 KCNJ4P48050 445 aa11.48□□□□□ -0.57
SSBP2-201ENST00000320672 CCDC146Q8IYE0 955 aa11.48□□□□□ -0.57
SSBP2-201ENST00000320672 SRPK2P78362 688 aaKnown RBP11.48□□□□□ -0.57
SSBP2-201ENST00000320672 BECN1Q14457 450 aa11.47□□□□□ -0.57
SSBP2-201ENST00000320672 SLKQ9H2G2 1235 aaPredicted RBP11.46□□□□□ -0.57
SSBP2-201ENST00000320672 CFAP53Q96M91 514 aa11.46□□□□□ -0.58
SSBP2-201ENST00000320672 SLC4A3P48751 1232 aa11.45□□□□□ -0.58
SSBP2-201ENST00000320672 CLUAP1Q96AJ1 413 aa11.45□□□□□ -0.58
SSBP2-201ENST00000320672 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.44□□□□□ -0.58
SSBP2-201ENST00000320672 ZRSR1Q15695 479 aaKnown RBP11.44□□□□□ -0.58
SSBP2-201ENST00000320672 NOP58Q9Y2X3 529 aaKnown RBP11.43□□□□□ -0.58
SSBP2-201ENST00000320672 LTV1Q96GA3 475 aaPredicted RBP11.43□□□□□ -0.58
SSBP2-201ENST00000320672 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
SSBP2-201ENST00000320672 HSPA5P11021 654 aaKnown RBP11.43□□□□□ -0.58
SSBP2-201ENST00000320672 GLIPR1L2Q4G1C9 344 aa11.43□□□□□ -0.58
SSBP2-201ENST00000320672 FOXD4L6Q3SYB3 417 aaPredicted RBP11.42□□□□□ -0.58
SSBP2-201ENST00000320672 FOXD4L3Q6VB84 417 aaPredicted RBP11.42□□□□□ -0.58
SSBP2-201ENST00000320672 DDRGK1Q96HY6 314 aa11.42□□□□□ -0.58
SSBP2-201ENST00000320672 DEKP35659 375 aaKnown RBP11.42□□□□□ -0.58
SSBP2-201ENST00000320672 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
SSBP2-201ENST00000320672 KANK4Q5T7N3 995 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms