RNA–Protein interactions for RNA: ENST00000317257.12

SETDB2-202, Transcript of SET domain bifurcated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SETDB2, Length 5,619 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB2-202ENST00000317257 ZNF428Q96B54 188 aa6.06□□□□□ -1.44
SETDB2-202ENST00000317257 RGS22Q8NE09 1264 aa6.06□□□□□ -1.44
SETDB2-202ENST00000317257 CDK11BP21127 795 aaKnown RBP6.05□□□□□ -1.44
SETDB2-202ENST00000317257 CDK11AQ9UQ88 783 aaPredicted RBP6.05□□□□□ -1.44
SETDB2-202ENST00000317257 LMOD2Q6P5Q4 547 aa6.05□□□□□ -1.44
SETDB2-202ENST00000317257 PDIA4P13667 645 aaKnown RBP6.05□□□□□ -1.44
SETDB2-202ENST00000317257 SLC24A3Q9HC58 644 aa6.04□□□□□ -1.44
SETDB2-202ENST00000317257 SPOCK2Q92563 424 aa6.02□□□□□ -1.45
SETDB2-202ENST00000317257 SCAF1Q9H7N4 1312 aaKnown RBP6.02□□□□□ -1.45
SETDB2-202ENST00000317257 ZC3H15Q8WU90 426 aaKnown RBP6.01□□□□□ -1.45
SETDB2-202ENST00000317257 NKX1-1Q15270 411 aaPredicted RBP6□□□□□ -1.45
SETDB2-202ENST00000317257 MTMR7Q9Y216 660 aa6□□□□□ -1.45
SETDB2-202ENST00000317257 FOXD4L5Q5VV16 416 aaPredicted RBP5.99□□□□□ -1.45
SETDB2-202ENST00000317257 FOXD4L4Q8WXT5 416 aaPredicted RBP5.99□□□□□ -1.45
SETDB2-202ENST00000317257 KCTD17Q8N5Z5 321 aa5.97□□□□□ -1.45
SETDB2-202ENST00000317257 HSP90B1P14625 803 aaKnown RBP5.97□□□□□ -1.45
SETDB2-202ENST00000317257 APBB1O00213 710 aa5.96□□□□□ -1.45
SETDB2-202ENST00000317257 ZEB1P37275 1124 aaPredicted RBP5.96□□□□□ -1.46
SETDB2-202ENST00000317257 PUS7Q96PZ0 661 aaKnown RBP5.96□□□□□ -1.46
SETDB2-202ENST00000317257 HS6ST3Q8IZP7 471 aa5.96□□□□□ -1.46
SETDB2-202ENST00000317257 MKRN4PQ13434 485 aaPredicted RBP5.95□□□□□ -1.46
SETDB2-202ENST00000317257 DHX37Q8IY37 1157 aaKnown RBP5.95□□□□□ -1.46
SETDB2-202ENST00000317257 GTPBP6O43824 516 aaPredicted RBP5.94□□□□□ -1.46
SETDB2-202ENST00000317257 RAD21O60216 631 aa5.94□□□□□ -1.46
SETDB2-202ENST00000317257 NISCHQ9Y2I1 1504 aa5.94□□□□□ -1.46
SETDB2-202ENST00000317257 RBM25P49756 843 aaKnown RBP5.93□□□□□ -1.46
SETDB2-202ENST00000317257 CENPBP07199 599 aaPredicted RBP5.93□□□□□ -1.46
SETDB2-202ENST00000317257 IL27Q8NEV9 243 aa5.91□□□□□ -1.46
SETDB2-202ENST00000317257 CCDC82Q8N4S0 544 aa5.91□□□□□ -1.46
SETDB2-202ENST00000317257 KCNV2Q8TDN2 545 aa5.91□□□□□ -1.46
SETDB2-202ENST00000317257 GPBP1L1Q9HC44 474 aaPredicted RBP5.9□□□□□ -1.47
SETDB2-202ENST00000317257 HOXD11P31277 338 aaPredicted RBP5.89□□□□□ -1.47
SETDB2-202ENST00000317257 MKRN3Q13064 507 aaKnown RBP5.89□□□□□ -1.47
SETDB2-202ENST00000317257 HMGB1P09429 215 aaKnown RBP5.88□□□□□ -1.47
SETDB2-202ENST00000317257 TRAIPQ9BWF2 469 aa5.87□□□□□ -1.47
SETDB2-202ENST00000317257 AEBP1Q8IUX7 1158 aa5.87□□□□□ -1.47
SETDB2-202ENST00000317257 CCDC180Q9P1Z9 1646 aa5.87□□□□□ -1.47
SETDB2-202ENST00000317257 RNF25Q96BH1 459 aaPredicted RBP5.86□□□□□ -1.47
SETDB2-202ENST00000317257 ZNF219Q9P2Y4 722 aaPredicted RBP5.86□□□□□ -1.47
SETDB2-202ENST00000317257 ZMYND10O75800 440 aa5.85□□□□□ -1.47
SETDB2-202ENST00000317257 CADPS2Q86UW7 1296 aa5.84□□□□□ -1.47
SETDB2-202ENST00000317257 ZNF692Q9BU19 519 aaPredicted RBP5.84□□□□□ -1.47
SETDB2-202ENST00000317257 UBE2Q2Q8WVN8 375 aa5.83□□□□□ -1.48
SETDB2-202ENST00000317257 GZF1Q9H116 711 aaPredicted RBP5.83□□□□□ -1.48
SETDB2-202ENST00000317257 BRD2P25440 801 aaKnown RBP5.82□□□□□ -1.48
SETDB2-202ENST00000317257 MYT1LQ9UL68 1186 aa5.82□□□□□ -1.48
SETDB2-202ENST00000317257 MFAP1P55081 439 aaKnown RBP5.82□□□□□ -1.48
SETDB2-202ENST00000317257 TRIM41Q8WV44 630 aa5.82□□□□□ -1.48
SETDB2-202ENST00000317257 P3H3Q8IVL6 736 aa5.81□□□□□ -1.48
SETDB2-202ENST00000317257 FAM177A1Q8N128 213 aaPredicted RBP5.81□□□□□ -1.48
SETDB2-202ENST00000317257 CIZ1Q9ULV3 898 aaPredicted RBP5.81□□□□□ -1.48
SETDB2-202ENST00000317257 CLUAP1Q96AJ1 413 aa5.81□□□□□ -1.48
SETDB2-202ENST00000317257 IRF5Q13568 498 aa5.8□□□□□ -1.48
SETDB2-202ENST00000317257 KDM4CQ9H3R0 1056 aa5.8□□□□□ -1.48
SETDB2-202ENST00000317257 USP35Q9P2H5 1018 aa5.8□□□□□ -1.48
SETDB2-202ENST00000317257 WDR70Q9NW82 654 aa5.79□□□□□ -1.48
SETDB2-202ENST00000317257 TMCO4Q5TGY1 634 aa5.78□□□□□ -1.48
SETDB2-202ENST00000317257 FAM9AQ8IZU1 332 aaPredicted RBP5.78□□□□□ -1.48
SETDB2-202ENST00000317257 POLA2Q14181 598 aa5.78□□□□□ -1.48
SETDB2-202ENST00000317257 TRAK2O60296 914 aa5.77□□□□□ -1.49
SETDB2-202ENST00000317257 POLR3GLQ9BT43 218 aa5.77□□□□□ -1.49
SETDB2-202ENST00000317257 SEMA3EO15041 775 aa5.76□□□□□ -1.49
SETDB2-202ENST00000317257 TESPA1A2RU30 521 aaPredicted RBP5.73□□□□□ -1.49
SETDB2-202ENST00000317257 CLSPNQ9HAW4 1339 aa5.73□□□□□ -1.49
SETDB2-202ENST00000317257 E9PSI1 815 aa5.73□□□□□ -1.49
SETDB2-202ENST00000317257 RETREG2Q8NC44 543 aa5.73□□□□□ -1.49
SETDB2-202ENST00000317257 ONECUT3O60422 494 aaPredicted RBP5.72□□□□□ -1.49
SETDB2-202ENST00000317257 BARGINQ6ZT62 677 aa5.72□□□□□ -1.49
SETDB2-202ENST00000317257 ZNF316A6NFI3 1004 aaPredicted RBP5.71□□□□□ -1.49
SETDB2-202ENST00000317257 FAM117AQ9C073 453 aa5.71□□□□□ -1.49
SETDB2-202ENST00000317257 ZNF777Q9ULD5 760 aaPredicted RBP5.71□□□□□ -1.5
SETDB2-202ENST00000317257 PLEKHG3A1L390 1219 aa5.71□□□□□ -1.5
SETDB2-202ENST00000317257 GLIPR1L2Q4G1C9 344 aa5.71□□□□□ -1.5
SETDB2-202ENST00000317257 U3KPZ7 1027 aaPredicted RBP5.7□□□□□ -1.5
SETDB2-202ENST00000317257 PDE4CQ08493 712 aa5.7□□□□□ -1.5
SETDB2-202ENST00000317257 DMRT2Q9Y5R5 561 aa5.7□□□□□ -1.5
SETDB2-202ENST00000317257 UNCXA6NJT0 531 aa5.7□□□□□ -1.5
SETDB2-202ENST00000317257 AK7Q96M32 723 aa5.69□□□□□ -1.5
SETDB2-202ENST00000317257 PLCD3Q8N3E9 789 aa5.69□□□□□ -1.5
SETDB2-202ENST00000317257 BRPF3Q9ULD4 1205 aa5.68□□□□□ -1.5
SETDB2-202ENST00000317257 TAF7LQ5H9L4 462 aa5.68□□□□□ -1.5
SETDB2-202ENST00000317257 ZFP91Q96JP5 570 aaPredicted RBP5.68□□□□□ -1.5
SETDB2-202ENST00000317257 A6NJR5 290 aa5.68□□□□□ -1.5
SETDB2-202ENST00000317257 RIOK3O14730 519 aaKnown RBP5.68□□□□□ -1.5
SETDB2-202ENST00000317257 RSPH4AQ5TD94 716 aa5.67□□□□□ -1.5
SETDB2-202ENST00000317257 TMED8Q6PL24 325 aaPredicted RBP5.67□□□□□ -1.5
SETDB2-202ENST00000317257 FLIIQ13045 1269 aa5.66□□□□□ -1.5
SETDB2-202ENST00000317257 CWC22Q9HCG8 908 aaKnown RBP5.66□□□□□ -1.5
SETDB2-202ENST00000317257 STK25O00506 426 aa5.66□□□□□ -1.5
SETDB2-202ENST00000317257 TRIM66O15016 1216 aa5.66□□□□□ -1.5
SETDB2-202ENST00000317257 PDE4DQ08499 809 aa5.65□□□□□ -1.5
SETDB2-202ENST00000317257 NEFLP07196 543 aa5.65□□□□□ -1.51
SETDB2-202ENST00000317257 IRX6P78412 446 aaPredicted RBP5.65□□□□□ -1.51
SETDB2-202ENST00000317257 CERS3Q8IU89 383 aa5.65□□□□□ -1.51
SETDB2-202ENST00000317257 FNBP4Q8N3X1 1017 aaPredicted RBP5.65□□□□□ -1.51
SETDB2-202ENST00000317257 ARHGEF1Q92888 912 aaKnown RBP5.65□□□□□ -1.51
SETDB2-202ENST00000317257 POM121Q96HA1 1249 aa5.65□□□□□ -1.51
SETDB2-202ENST00000317257 FBXW7Q969H0 707 aa5.64□□□□□ -1.51
SETDB2-202ENST00000317257 PPM1GO15355 546 aaPredicted RBP5.64□□□□□ -1.51
SETDB2-202ENST00000317257 RBM26Q5T8P6 1007 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms