RNA–Protein interactions for RNA: ENST00000304538.10

PRDM10-201, Transcript of PR/SET domain 10, humanhuman

TSL 1 (best) BASIC

Gene PRDM10, Length 5,817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM10-201ENST00000304538 RGL3Q3MIN7 710 aa13.22□□□□□ -0.29
PRDM10-201ENST00000304538 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.21□□□□□ -0.3
PRDM10-201ENST00000304538 TULP1O00294 542 aaPredicted RBP13.2□□□□□ -0.3
PRDM10-201ENST00000304538 PPM1GO15355 546 aaPredicted RBP13.19□□□□□ -0.3
PRDM10-201ENST00000304538 NPHP1O15259 732 aa13.18□□□□□ -0.3
PRDM10-201ENST00000304538 MYH16Q9H6N6 1097 aa13.18□□□□□ -0.3
PRDM10-201ENST00000304538 CDK11BP21127 795 aaKnown RBP13.17□□□□□ -0.3
PRDM10-201ENST00000304538 SENP3-EIF4A1A0A087X0R7 540 aa13.17□□□□□ -0.3
PRDM10-201ENST00000304538 HIRIP3Q9BW71 556 aaPredicted RBP13.16□□□□□ -0.3
PRDM10-201ENST00000304538 MLECQ14165 292 aa13.14□□□□□ -0.31
PRDM10-201ENST00000304538 ERCC6Q03468 1493 aa13.14□□□□□ -0.31
PRDM10-201ENST00000304538 MRS2Q9HD23 443 aa13.14□□□□□ -0.31
PRDM10-201ENST00000304538 CCDC136Q96JN2 1154 aa13.12□□□□□ -0.31
PRDM10-201ENST00000304538 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
PRDM10-201ENST00000304538 TAOK2Q9UL54 1235 aa13.1□□□□□ -0.31
PRDM10-201ENST00000304538 CFDP1Q9UEE9 299 aaPredicted RBP13.1□□□□□ -0.31
PRDM10-201ENST00000304538 POGKQ9P215 609 aa13.1□□□□□ -0.31
PRDM10-201ENST00000304538 NBR1Q14596 966 aa13.09□□□□□ -0.31
PRDM10-201ENST00000304538 TPRNQ4KMQ1 711 aa13.09□□□□□ -0.31
PRDM10-201ENST00000304538 ACIN1Q9UKV3 1341 aaKnown RBP13.07□□□□□ -0.32
PRDM10-201ENST00000304538 CFAP53Q96M91 514 aa13.05□□□□□ -0.32
PRDM10-201ENST00000304538 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
PRDM10-201ENST00000304538 EIF4G2P78344 907 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRDM10-201ENST00000304538 SOX12O15370 315 aa13.01□□□□□ -0.33
PRDM10-201ENST00000304538 NEUROD2Q15784 382 aa13.01□□□□□ -0.33
PRDM10-201ENST00000304538 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
PRDM10-201ENST00000304538 RSF1Q96T23 1441 aaPredicted RBP13□□□□□ -0.33
PRDM10-201ENST00000304538 TNNT2P45379 298 aaPredicted RBP13□□□□□ -0.33
PRDM10-201ENST00000304538 CLIP1P30622 1438 aa12.99□□□□□ -0.33
PRDM10-201ENST00000304538 CDCA8Q53HL2 280 aa12.98□□□□□ -0.33
PRDM10-201ENST00000304538 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
PRDM10-201ENST00000304538 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
PRDM10-201ENST00000304538 MAPK8IP3Q9UPT6 1336 aa12.97□□□□□ -0.33
PRDM10-201ENST00000304538 CARD11Q9BXL7 1154 aa12.96□□□□□ -0.33
PRDM10-201ENST00000304538 NCLP19338 710 aaKnown RBP12.94□□□□□ -0.34
PRDM10-201ENST00000304538 RB1CC1Q8TDY2 1594 aa12.93□□□□□ -0.34
PRDM10-201ENST00000304538 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
PRDM10-201ENST00000304538 NUDCQ9Y266 331 aa12.93□□□□□ -0.34
PRDM10-201ENST00000304538 SAFB2Q14151 953 aaKnown RBP eCLIP12.93□□□□□ -0.34
PRDM10-201ENST00000304538 U2SURPO15042 1029 aaKnown RBP12.92□□□□□ -0.34
PRDM10-201ENST00000304538 HDGFP51858 240 aaKnown RBP12.92□□□□□ -0.34
PRDM10-201ENST00000304538 FTSJ3Q8IY81 847 aaKnown RBP12.92□□□□□ -0.34
PRDM10-201ENST00000304538 GGT6Q6P531 493 aa12.91□□□□□ -0.34
PRDM10-201ENST00000304538 OS9Q13438 667 aaPredicted RBP12.91□□□□□ -0.34
PRDM10-201ENST00000304538 BAZ1BQ9UIG0 1483 aaKnown RBP12.9□□□□□ -0.34
PRDM10-201ENST00000304538 ZRSR1Q15695 479 aaKnown RBP12.89□□□□□ -0.35
PRDM10-201ENST00000304538 CCDC9Q9Y3X0 531 aaKnown RBP12.89□□□□□ -0.35
PRDM10-201ENST00000304538 SRPK2P78362 688 aaKnown RBP12.88□□□□□ -0.35
PRDM10-201ENST00000304538 CASC1Q6TDU7 716 aa12.87□□□□□ -0.35
PRDM10-201ENST00000304538 PAK3O75914 559 aaPredicted RBP12.87□□□□□ -0.35
PRDM10-201ENST00000304538 STK26Q9P289 416 aa12.86□□□□□ -0.35
PRDM10-201ENST00000304538 NAP1L2Q9ULW6 460 aaPredicted RBP12.86□□□□□ -0.35
PRDM10-201ENST00000304538 KANK1Q14678 1352 aa12.86□□□□□ -0.35
PRDM10-201ENST00000304538 CC2D1BQ5T0F9 858 aaKnown RBP12.86□□□□□ -0.35
PRDM10-201ENST00000304538 ISY1Q9ULR0 285 aaKnown RBP12.86□□□□□ -0.35
PRDM10-201ENST00000304538 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
PRDM10-201ENST00000304538 CSB-PGBD3P0DP91 1061 aa12.85□□□□□ -0.35
PRDM10-201ENST00000304538 FRAT1Q92837 279 aaPredicted RBP12.84□□□□□ -0.35
PRDM10-201ENST00000304538 ZNF330Q9Y3S2 320 aaPredicted RBP12.84□□□□□ -0.35
PRDM10-201ENST00000304538 CCNB3Q8WWL7 1395 aa12.84□□□□□ -0.35
PRDM10-201ENST00000304538 FGD1P98174 961 aa12.84□□□□□ -0.35
PRDM10-201ENST00000304538 EIF4G1Q04637 1599 aaKnown RBP12.83□□□□□ -0.36
PRDM10-201ENST00000304538 CLSTN1O94985 981 aa12.82□□□□□ -0.36
PRDM10-201ENST00000304538 WRNQ14191 1432 aaPredicted RBP eCLIP12.82□□□□□ -0.36
PRDM10-201ENST00000304538 BECN1Q14457 450 aa12.81□□□□□ -0.36
PRDM10-201ENST00000304538 MIER1Q8N108 512 aa12.81□□□□□ -0.36
PRDM10-201ENST00000304538 DCAF11Q8TEB1 546 aa12.81□□□□□ -0.36
PRDM10-201ENST00000304538 PTMAP06454 111 aaKnown RBP12.81□□□□□ -0.36
PRDM10-201ENST00000304538 KCNJ4P48050 445 aa12.8□□□□□ -0.36
PRDM10-201ENST00000304538 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
PRDM10-201ENST00000304538 GOLGA6L22H0YM25 854 aa12.8□□□□□ -0.36
PRDM10-201ENST00000304538 GOLGA3Q08378 1498 aa12.8□□□□□ -0.36
PRDM10-201ENST00000304538 TRIM44Q96DX7 344 aaPredicted RBP12.79□□□□□ -0.36
PRDM10-201ENST00000304538 RGS3P49796 1198 aa12.77□□□□□ -0.36
PRDM10-201ENST00000304538 RTF1Q92541 710 aaKnown RBP12.76□□□□□ -0.37
PRDM10-201ENST00000304538 PNNQ9H307 717 aaKnown RBP12.76□□□□□ -0.37
PRDM10-201ENST00000304538 GLIPR1L2Q4G1C9 344 aa12.76□□□□□ -0.37
PRDM10-201ENST00000304538 SIN3AQ96ST3 1273 aa12.76□□□□□ -0.37
PRDM10-201ENST00000304538 TMF1P82094 1093 aa12.75□□□□□ -0.37
PRDM10-201ENST00000304538 DNTTIP2Q5QJE6 756 aaKnown RBP12.75□□□□□ -0.37
PRDM10-201ENST00000304538 CEP162Q5TB80 1403 aa12.75□□□□□ -0.37
PRDM10-201ENST00000304538 MORC1Q86VD1 984 aa12.74□□□□□ -0.37
PRDM10-201ENST00000304538 TMX4Q9H1E5 349 aaPredicted RBP12.74□□□□□ -0.37
PRDM10-201ENST00000304538 AEBP2Q6ZN18 517 aaPredicted RBP12.74□□□□□ -0.37
PRDM10-201ENST00000304538 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
PRDM10-201ENST00000304538 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
PRDM10-201ENST00000304538 DDRGK1Q96HY6 314 aa12.71□□□□□ -0.38
PRDM10-201ENST00000304538 EEA1Q15075 1411 aa12.7□□□□□ -0.38
PRDM10-201ENST00000304538 CHMP4BQ9H444 224 aaKnown RBP12.7□□□□□ -0.38
PRDM10-201ENST00000304538 SUPT16HQ9Y5B9 1047 aaKnown RBP12.69□□□□□ -0.38
PRDM10-201ENST00000304538 APBB1O00213 710 aa12.68□□□□□ -0.38
PRDM10-201ENST00000304538 EID1Q9Y6B2 187 aa12.68□□□□□ -0.38
PRDM10-201ENST00000304538 NUTM2DQ5VT03 806 aaPredicted RBP12.68□□□□□ -0.38
PRDM10-201ENST00000304538 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
PRDM10-201ENST00000304538 CUX2O14529 1486 aa12.68□□□□□ -0.38
PRDM10-201ENST00000304538 DCAF1Q9Y4B6 1507 aa12.67□□□□□ -0.38
PRDM10-201ENST00000304538 NUTM2FA1L443 756 aa12.66□□□□□ -0.38
PRDM10-201ENST00000304538 G3V3G9 751 aa12.66□□□□□ -0.38
PRDM10-201ENST00000304538 MS4A1P11836 297 aa12.66□□□□□ -0.38
PRDM10-201ENST00000304538 DCAF8Q5TAQ9 597 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms