RNA–Protein interactions for RNA: ENST00000302764.8

NUDCD2-201, Transcript of NudC domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD2, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD2-201ENST00000302764 UPF2Q9HAU5 1272 aaKnown RBP13.46□□□□□ -0.26
NUDCD2-201ENST00000302764 TNNT2P45379 298 aaPredicted RBP13.45□□□□□ -0.26
NUDCD2-201ENST00000302764 CCDC136Q96JN2 1154 aa13.45□□□□□ -0.26
NUDCD2-201ENST00000302764 WDR43Q15061 677 aaKnown RBP eCLIP13.45□□□□□ -0.26
NUDCD2-201ENST00000302764 NCLP19338 710 aaKnown RBP13.44□□□□□ -0.26
NUDCD2-201ENST00000302764 SOX12O15370 315 aa13.44□□□□□ -0.26
NUDCD2-201ENST00000302764 NEUROD2Q15784 382 aa13.44□□□□□ -0.26
NUDCD2-201ENST00000302764 TONSLQ96HA7 1378 aa13.43□□□□□ -0.26
NUDCD2-201ENST00000302764 RTN4Q9NQC3 1192 aaKnown RBP13.43□□□□□ -0.26
NUDCD2-201ENST00000302764 CDK11BP21127 795 aaKnown RBP13.43□□□□□ -0.26
NUDCD2-201ENST00000302764 NPHP1O15259 732 aa13.42□□□□□ -0.26
NUDCD2-201ENST00000302764 RRP7BPQ9NSQ0 103 aa13.4□□□□□ -0.26
NUDCD2-201ENST00000302764 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
NUDCD2-201ENST00000302764 ANO8Q9HCE9 1232 aaPredicted RBP13.39□□□□□ -0.27
NUDCD2-201ENST00000302764 MRS2Q9HD23 443 aa13.36□□□□□ -0.27
NUDCD2-201ENST00000302764 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.34□□□□□ -0.27
NUDCD2-201ENST00000302764 NAP1L2Q9ULW6 460 aaPredicted RBP13.34□□□□□ -0.27
NUDCD2-201ENST00000302764 PLCB2Q00722 1185 aa13.33□□□□□ -0.28
NUDCD2-201ENST00000302764 CLSTN1O94985 981 aa13.32□□□□□ -0.28
NUDCD2-201ENST00000302764 SPRYD3Q8NCJ5 442 aa13.31□□□□□ -0.28
NUDCD2-201ENST00000302764 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.3□□□□□ -0.28
NUDCD2-201ENST00000302764 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
NUDCD2-201ENST00000302764 MLECQ14165 292 aa13.3□□□□□ -0.28
NUDCD2-201ENST00000302764 MIER1Q8N108 512 aa13.28□□□□□ -0.28
NUDCD2-201ENST00000302764 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
NUDCD2-201ENST00000302764 TRHP20396 242 aaPredicted RBP13.27□□□□□ -0.29
NUDCD2-201ENST00000302764 SAFB2Q14151 953 aaKnown RBP eCLIP13.27□□□□□ -0.29
NUDCD2-201ENST00000302764 ISY1Q9ULR0 285 aaKnown RBP13.26□□□□□ -0.29
NUDCD2-201ENST00000302764 SCRIBQ14160 1630 aa13.26□□□□□ -0.29
NUDCD2-201ENST00000302764 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
NUDCD2-201ENST00000302764 ARID3AQ99856 593 aa13.23□□□□□ -0.29
NUDCD2-201ENST00000302764 CC2D1BQ5T0F9 858 aaKnown RBP13.23□□□□□ -0.29
NUDCD2-201ENST00000302764 DNTTIP2Q5QJE6 756 aaKnown RBP13.23□□□□□ -0.29
NUDCD2-201ENST00000302764 FRAT1Q92837 279 aaPredicted RBP13.23□□□□□ -0.29
NUDCD2-201ENST00000302764 PDE4CQ08493 712 aa13.22□□□□□ -0.29
NUDCD2-201ENST00000302764 RGS3P49796 1198 aa13.21□□□□□ -0.29
NUDCD2-201ENST00000302764 PTMAP06454 111 aaKnown RBP13.2□□□□□ -0.3
NUDCD2-201ENST00000302764 ZNF330Q9Y3S2 320 aaPredicted RBP13.19□□□□□ -0.3
NUDCD2-201ENST00000302764 ERICH6BQ5W0A0 696 aa13.19□□□□□ -0.3
NUDCD2-201ENST00000302764 APBB1O00213 710 aa13.19□□□□□ -0.3
NUDCD2-201ENST00000302764 TSPY4P0CV99 314 aa13.18□□□□□ -0.3
NUDCD2-201ENST00000302764 TSPY10P0CW01 314 aa13.18□□□□□ -0.3
NUDCD2-201ENST00000302764 FTSJ3Q8IY81 847 aaKnown RBP13.16□□□□□ -0.3
NUDCD2-201ENST00000302764 OS9Q13438 667 aaPredicted RBP13.16□□□□□ -0.3
NUDCD2-201ENST00000302764 TRIM44Q96DX7 344 aaPredicted RBP13.16□□□□□ -0.3
NUDCD2-201ENST00000302764 SUPT16HQ9Y5B9 1047 aaKnown RBP13.16□□□□□ -0.3
NUDCD2-201ENST00000302764 U2SURPO15042 1029 aaKnown RBP13.15□□□□□ -0.3
NUDCD2-201ENST00000302764 ZRSR1Q15695 479 aaKnown RBP13.13□□□□□ -0.31
NUDCD2-201ENST00000302764 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
NUDCD2-201ENST00000302764 FGD1P98174 961 aa13.1□□□□□ -0.31
NUDCD2-201ENST00000302764 POGKQ9P215 609 aa13.09□□□□□ -0.31
NUDCD2-201ENST00000302764 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
NUDCD2-201ENST00000302764 NAP1L5Q96NT1 182 aaPredicted RBP13.09□□□□□ -0.31
NUDCD2-201ENST00000302764 STK26Q9P289 416 aa13.09□□□□□ -0.31
NUDCD2-201ENST00000302764 GLIPR1L2Q4G1C9 344 aa13.08□□□□□ -0.32
NUDCD2-201ENST00000302764 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
NUDCD2-201ENST00000302764 KCNJ4P48050 445 aa13.07□□□□□ -0.32
NUDCD2-201ENST00000302764 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
NUDCD2-201ENST00000302764 NUTM2DQ5VT03 806 aaPredicted RBP13.06□□□□□ -0.32
NUDCD2-201ENST00000302764 SIN3AQ96ST3 1273 aa13.05□□□□□ -0.32
NUDCD2-201ENST00000302764 PRM3Q9NNZ6 103 aa13.05□□□□□ -0.32
NUDCD2-201ENST00000302764 CCDC9Q9Y3X0 531 aaKnown RBP13.04□□□□□ -0.32
NUDCD2-201ENST00000302764 B4GALNT3Q6L9W6 998 aa13.03□□□□□ -0.32
NUDCD2-201ENST00000302764 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
NUDCD2-201ENST00000302764 EIF4G2P78344 907 aaKnown RBP eCLIP13.02□□□□□ -0.32
NUDCD2-201ENST00000302764 HSP90AB1P08238 724 aaKnown RBP13.02□□□□□ -0.33
NUDCD2-201ENST00000302764 CARD11Q9BXL7 1154 aa13.02□□□□□ -0.33
NUDCD2-201ENST00000302764 BECN1Q14457 450 aa13.01□□□□□ -0.33
NUDCD2-201ENST00000302764 CASC1Q6TDU7 716 aa13.01□□□□□ -0.33
NUDCD2-201ENST00000302764 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
NUDCD2-201ENST00000302764 MAPK8IP3Q9UPT6 1336 aa13□□□□□ -0.33
NUDCD2-201ENST00000302764 FOXD1Q16676 465 aa13□□□□□ -0.33
NUDCD2-201ENST00000302764 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
NUDCD2-201ENST00000302764 GOLGA6L22H0YM25 854 aa12.97□□□□□ -0.33
NUDCD2-201ENST00000302764 SRPK2P78362 688 aaKnown RBP12.96□□□□□ -0.33
NUDCD2-201ENST00000302764 CREBRFQ8IUR6 639 aa12.96□□□□□ -0.33
NUDCD2-201ENST00000302764 CFAP53Q96M91 514 aa12.96□□□□□ -0.34
NUDCD2-201ENST00000302764 NOL8Q76FK4 1167 aaKnown RBP12.96□□□□□ -0.34
NUDCD2-201ENST00000302764 GZF1Q9H116 711 aaPredicted RBP12.96□□□□□ -0.34
NUDCD2-201ENST00000302764 DRC7Q8IY82 874 aa12.95□□□□□ -0.34
NUDCD2-201ENST00000302764 FOXD4L1Q9NU39 408 aa12.95□□□□□ -0.34
NUDCD2-201ENST00000302764 CHMP3Q9Y3E7 222 aa12.95□□□□□ -0.34
NUDCD2-201ENST00000302764 PLEKHD1A6NEE1 506 aa12.92□□□□□ -0.34
NUDCD2-201ENST00000302764 ZCCHC6Q5VYS8 1495 aaKnown RBP12.92□□□□□ -0.34
NUDCD2-201ENST00000302764 FOXD4L5Q5VV16 416 aaPredicted RBP12.91□□□□□ -0.34
NUDCD2-201ENST00000302764 FOXD4L4Q8WXT5 416 aaPredicted RBP12.91□□□□□ -0.34
NUDCD2-201ENST00000302764 CSB-PGBD3P0DP91 1061 aa12.91□□□□□ -0.34
NUDCD2-201ENST00000302764 DDRGK1Q96HY6 314 aa12.91□□□□□ -0.34
NUDCD2-201ENST00000302764 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
NUDCD2-201ENST00000302764 DCAF11Q8TEB1 546 aa12.9□□□□□ -0.34
NUDCD2-201ENST00000302764 GNL2Q13823 731 aaKnown RBP12.9□□□□□ -0.34
NUDCD2-201ENST00000302764 GGT6Q6P531 493 aa12.9□□□□□ -0.34
NUDCD2-201ENST00000302764 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.89□□□□□ -0.35
NUDCD2-201ENST00000302764 LTV1Q96GA3 475 aaPredicted RBP12.89□□□□□ -0.35
NUDCD2-201ENST00000302764 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
NUDCD2-201ENST00000302764 GOLGA6L4A6NEF3 574 aa12.86□□□□□ -0.35
NUDCD2-201ENST00000302764 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
NUDCD2-201ENST00000302764 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
NUDCD2-201ENST00000302764 EIF4G1Q04637 1599 aaKnown RBP12.84□□□□□ -0.35
NUDCD2-201ENST00000302764 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms