RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 HNRNPUQ00839 825 aaKnown RBP eCLIP13.57□□□□□ -0.24
KPNB1-201ENST00000290158 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
KPNB1-201ENST00000290158 CCDC136Q96JN2 1154 aa13.57□□□□□ -0.24
KPNB1-201ENST00000290158 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
KPNB1-201ENST00000290158 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
KPNB1-201ENST00000290158 MTUS2Q5JR59 1369 aa13.55□□□□□ -0.24
KPNB1-201ENST00000290158 TONSLQ96HA7 1378 aa13.54□□□□□ -0.24
KPNB1-201ENST00000290158 SENP3-EIF4A1A0A087X0R7 540 aa13.53□□□□□ -0.24
KPNB1-201ENST00000290158 RTN4Q9NQC3 1192 aaKnown RBP13.53□□□□□ -0.24
KPNB1-201ENST00000290158 DDX10Q13206 875 aaKnown RBP13.52□□□□□ -0.24
KPNB1-201ENST00000290158 DCAF1Q9Y4B6 1507 aa13.52□□□□□ -0.24
KPNB1-201ENST00000290158 TRIM44Q96DX7 344 aaPredicted RBP13.52□□□□□ -0.25
KPNB1-201ENST00000290158 DDRGK1Q96HY6 314 aa13.51□□□□□ -0.25
KPNB1-201ENST00000290158 MIER1Q8N108 512 aa13.5□□□□□ -0.25
KPNB1-201ENST00000290158 RRP7BPQ9NSQ0 103 aa13.48□□□□□ -0.25
KPNB1-201ENST00000290158 PLEKHD1A6NEE1 506 aa13.48□□□□□ -0.25
KPNB1-201ENST00000290158 NAP1L5Q96NT1 182 aaPredicted RBP13.48□□□□□ -0.25
KPNB1-201ENST00000290158 HIRIP3Q9BW71 556 aaPredicted RBP13.47□□□□□ -0.25
KPNB1-201ENST00000290158 NACADO15069 1562 aa13.47□□□□□ -0.25
KPNB1-201ENST00000290158 MLECQ14165 292 aa13.46□□□□□ -0.25
KPNB1-201ENST00000290158 TPRNQ4KMQ1 711 aa13.46□□□□□ -0.26
KPNB1-201ENST00000290158 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.26
KPNB1-201ENST00000290158 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
KPNB1-201ENST00000290158 LMOD2Q6P5Q4 547 aa13.43□□□□□ -0.26
KPNB1-201ENST00000290158 DEKP35659 375 aaKnown RBP13.42□□□□□ -0.26
KPNB1-201ENST00000290158 CDK11BP21127 795 aaKnown RBP13.42□□□□□ -0.26
KPNB1-201ENST00000290158 RGL3Q3MIN7 710 aa13.41□□□□□ -0.26
KPNB1-201ENST00000290158 TMC1Q8TDI8 760 aa13.4□□□□□ -0.26
KPNB1-201ENST00000290158 NOP58Q9Y2X3 529 aaKnown RBP13.4□□□□□ -0.26
KPNB1-201ENST00000290158 BECN1Q14457 450 aa13.39□□□□□ -0.27
KPNB1-201ENST00000290158 WDR43Q15061 677 aaKnown RBP eCLIP13.36□□□□□ -0.27
KPNB1-201ENST00000290158 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.36□□□□□ -0.27
KPNB1-201ENST00000290158 CFDP1Q9UEE9 299 aaPredicted RBP13.34□□□□□ -0.27
KPNB1-201ENST00000290158 SUPT16HQ9Y5B9 1047 aaKnown RBP13.34□□□□□ -0.27
KPNB1-201ENST00000290158 CLIP1P30622 1438 aa13.34□□□□□ -0.27
KPNB1-201ENST00000290158 NCLP19338 710 aaKnown RBP13.33□□□□□ -0.27
KPNB1-201ENST00000290158 RSF1Q96T23 1441 aaPredicted RBP13.3□□□□□ -0.28
KPNB1-201ENST00000290158 GOLGA6L22H0YM25 854 aa13.3□□□□□ -0.28
KPNB1-201ENST00000290158 LAS1LQ9Y4W2 734 aaKnown RBP13.3□□□□□ -0.28
KPNB1-201ENST00000290158 WRNQ14191 1432 aaPredicted RBP eCLIP13.29□□□□□ -0.28
KPNB1-201ENST00000290158 MRS2Q9HD23 443 aa13.29□□□□□ -0.28
KPNB1-201ENST00000290158 DNTTIP2Q5QJE6 756 aaKnown RBP13.28□□□□□ -0.28
KPNB1-201ENST00000290158 TULP1O00294 542 aaPredicted RBP13.28□□□□□ -0.28
KPNB1-201ENST00000290158 KIF27Q86VH2 1401 aa13.27□□□□□ -0.28
KPNB1-201ENST00000290158 NPHP1O15259 732 aa13.26□□□□□ -0.29
KPNB1-201ENST00000290158 PTMAP06454 111 aaKnown RBP13.26□□□□□ -0.29
KPNB1-201ENST00000290158 TAOK2Q9UL54 1235 aa13.26□□□□□ -0.29
KPNB1-201ENST00000290158 POGKQ9P215 609 aa13.26□□□□□ -0.29
KPNB1-201ENST00000290158 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
KPNB1-201ENST00000290158 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
KPNB1-201ENST00000290158 AMER1Q5JTC6 1135 aaPredicted RBP13.24□□□□□ -0.29
KPNB1-201ENST00000290158 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
KPNB1-201ENST00000290158 RBM19Q9Y4C8 960 aaKnown RBP13.24□□□□□ -0.29
KPNB1-201ENST00000290158 PPP4R2Q9NY27 417 aa13.23□□□□□ -0.29
KPNB1-201ENST00000290158 SOX12O15370 315 aa13.22□□□□□ -0.29
KPNB1-201ENST00000290158 L1TD1Q5T7N2 865 aaKnown RBP13.21□□□□□ -0.29
KPNB1-201ENST00000290158 CUX2O14529 1486 aa13.19□□□□□ -0.3
KPNB1-201ENST00000290158 BAZ1AQ9NRL2 1556 aaPredicted RBP13.18□□□□□ -0.3
KPNB1-201ENST00000290158 GGT6Q6P531 493 aa13.17□□□□□ -0.3
KPNB1-201ENST00000290158 SAFB2Q14151 953 aaKnown RBP eCLIP13.17□□□□□ -0.3
KPNB1-201ENST00000290158 MYH16Q9H6N6 1097 aa13.17□□□□□ -0.3
KPNB1-201ENST00000290158 CCNB3Q8WWL7 1395 aa13.16□□□□□ -0.3
KPNB1-201ENST00000290158 CEP162Q5TB80 1403 aa13.15□□□□□ -0.3
KPNB1-201ENST00000290158 KANK1Q14678 1352 aa13.14□□□□□ -0.31
KPNB1-201ENST00000290158 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.316e-17■■■□□ 18.9
KPNB1-201ENST00000290158 MSNP26038 577 aaKnown RBP13.12□□□□□ -0.31
KPNB1-201ENST00000290158 AEBP2Q6ZN18 517 aaPredicted RBP13.12□□□□□ -0.31
KPNB1-201ENST00000290158 CARD11Q9BXL7 1154 aa13.12□□□□□ -0.31
KPNB1-201ENST00000290158 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
KPNB1-201ENST00000290158 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
KPNB1-201ENST00000290158 TSHZ2Q9NRE2 1034 aa13.11□□□□□ -0.31
KPNB1-201ENST00000290158 NEUROD2Q15784 382 aa13.11□□□□□ -0.31
KPNB1-201ENST00000290158 STK26Q9P289 416 aa13.11□□□□□ -0.31
KPNB1-201ENST00000290158 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
KPNB1-201ENST00000290158 PNNQ9H307 717 aaKnown RBP13.1□□□□□ -0.31
KPNB1-201ENST00000290158 KNSTRNQ9Y448 316 aa13.09□□□□□ -0.31
KPNB1-201ENST00000290158 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
KPNB1-201ENST00000290158 CCDC9Q9Y3X0 531 aaKnown RBP13.09□□□□□ -0.31
KPNB1-201ENST00000290158 SPRYD3Q8NCJ5 442 aa13.09□□□□□ -0.31
KPNB1-201ENST00000290158 CEP164Q9UPV0 1460 aa13.08□□□□□ -0.32
KPNB1-201ENST00000290158 PAK3O75914 559 aaPredicted RBP13.08□□□□□ -0.32
KPNB1-201ENST00000290158 CHAF1AQ13111 956 aaPredicted RBP13.08□□□□□ -0.32
KPNB1-201ENST00000290158 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
KPNB1-201ENST00000290158 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
KPNB1-201ENST00000290158 SRPK2P78362 688 aaKnown RBP13.06□□□□□ -0.32
KPNB1-201ENST00000290158 RGS3P49796 1198 aa13.06□□□□□ -0.32
KPNB1-201ENST00000290158 HDGFP51858 240 aaKnown RBP13.06□□□□□ -0.32
KPNB1-201ENST00000290158 SOGA1O94964 1423 aa13.06□□□□□ -0.32
KPNB1-201ENST00000290158 ARID3AQ99856 593 aa13.06□□□□□ -0.32
KPNB1-201ENST00000290158 CC2D1BQ5T0F9 858 aaKnown RBP13.05□□□□□ -0.32
KPNB1-201ENST00000290158 EEA1Q15075 1411 aa13.05□□□□□ -0.32
KPNB1-201ENST00000290158 CARMIL2Q6F5E8 1435 aa13.05□□□□□ -0.32
KPNB1-201ENST00000290158 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
KPNB1-201ENST00000290158 MAPK8IP3Q9UPT6 1336 aa13.04□□□□□ -0.32
KPNB1-201ENST00000290158 U2SURPO15042 1029 aaKnown RBP13.04□□□□□ -0.32
KPNB1-201ENST00000290158 HSP90AA2PQ14568 343 aaPredicted RBP13.04□□□□□ -0.32
KPNB1-201ENST00000290158 VSIG10Q8N0Z9 540 aa13.04□□□□□ -0.32
KPNB1-201ENST00000290158 B4GALNT3Q6L9W6 998 aa13.04□□□□□ -0.32
KPNB1-201ENST00000290158 CDCA8Q53HL2 280 aa13.03□□□□□ -0.32
KPNB1-201ENST00000290158 ABCC8Q09428 1581 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms