RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 TRIM44Q96DX7 344 aaPredicted RBP23.82■■□□□ 1.4
COL5A3-201ENST00000264828 DDRGK1Q96HY6 314 aa23.79■■□□□ 1.4
COL5A3-201ENST00000264828 NACADO15069 1562 aa23.78■■□□□ 1.4
COL5A3-201ENST00000264828 BECN1Q14457 450 aa23.78■■□□□ 1.4
COL5A3-201ENST00000264828 PLEKHG5O94827 1062 aa23.77■■□□□ 1.4
COL5A3-201ENST00000264828 CDK11BP21127 795 aaKnown RBP23.76■■□□□ 1.39
COL5A3-201ENST00000264828 NCLP19338 710 aaKnown RBP23.76■■□□□ 1.39
COL5A3-201ENST00000264828 TPRNQ4KMQ1 711 aa23.76■■□□□ 1.39
COL5A3-201ENST00000264828 ZBTB7CA1YPR0 619 aa23.76■■□□□ 1.39
COL5A3-201ENST00000264828 MTUS2Q5JR59 1369 aa23.75■■□□□ 1.39
COL5A3-201ENST00000264828 A0A0G2JS52 829 aa23.75■■□□□ 1.39
COL5A3-201ENST00000264828 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
COL5A3-201ENST00000264828 CLIP1P30622 1438 aa23.7■■□□□ 1.38
COL5A3-201ENST00000264828 EIF4G2P78344 907 aaKnown RBP eCLIP23.67■■□□□ 1.38
COL5A3-201ENST00000264828 RTN4Q9NQC3 1192 aaKnown RBP23.67■■□□□ 1.38
COL5A3-201ENST00000264828 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
COL5A3-201ENST00000264828 TSPY4P0CV99 314 aa23.65■■□□□ 1.38
COL5A3-201ENST00000264828 TSPY10P0CW01 314 aa23.65■■□□□ 1.38
COL5A3-201ENST00000264828 ANP32EQ9BTT0 268 aa23.65■■□□□ 1.38
COL5A3-201ENST00000264828 GOLGA6L22H0YM25 854 aa23.65■■□□□ 1.38
COL5A3-201ENST00000264828 PTMAP06454 111 aaKnown RBP23.65■■□□□ 1.38
COL5A3-201ENST00000264828 RRP7BPQ9NSQ0 103 aa23.64■■□□□ 1.37
COL5A3-201ENST00000264828 GOLGA3Q08378 1498 aa23.63■■□□□ 1.37
COL5A3-201ENST00000264828 LAS1LQ9Y4W2 734 aaKnown RBP23.62■■□□□ 1.37
COL5A3-201ENST00000264828 SUPT16HQ9Y5B9 1047 aaKnown RBP23.61■■□□□ 1.37
COL5A3-201ENST00000264828 C14orf37Q86TY3 774 aa23.6■■□□□ 1.37
COL5A3-201ENST00000264828 DNTTIP2Q5QJE6 756 aaKnown RBP23.59■■□□□ 1.37
COL5A3-201ENST00000264828 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
COL5A3-201ENST00000264828 NAP1L5Q96NT1 182 aaPredicted RBP23.55■■□□□ 1.36
COL5A3-201ENST00000264828 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
COL5A3-201ENST00000264828 TNNT2P45379 298 aaPredicted RBP23.53■■□□□ 1.36
COL5A3-201ENST00000264828 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
COL5A3-201ENST00000264828 CEP162Q5TB80 1403 aa23.51■■□□□ 1.35
COL5A3-201ENST00000264828 ZRSR1Q15695 479 aaKnown RBP23.5■■□□□ 1.35
COL5A3-201ENST00000264828 RGL3Q3MIN7 710 aa23.5■■□□□ 1.35
COL5A3-201ENST00000264828 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
COL5A3-201ENST00000264828 EEA1Q15075 1411 aa23.49■■□□□ 1.35
COL5A3-201ENST00000264828 TULP1O00294 542 aaPredicted RBP23.48■■□□□ 1.35
COL5A3-201ENST00000264828 FTSJ3Q8IY81 847 aaKnown RBP23.48■■□□□ 1.35
COL5A3-201ENST00000264828 CASC1Q6TDU7 716 aa23.46■■□□□ 1.35
COL5A3-201ENST00000264828 TAOK2Q9UL54 1235 aa23.46■■□□□ 1.35
COL5A3-201ENST00000264828 PPM1GO15355 546 aaPredicted RBP23.46■■□□□ 1.35
COL5A3-201ENST00000264828 RGS3P49796 1198 aa23.46■■□□□ 1.35
COL5A3-201ENST00000264828 NEUROD2Q15784 382 aa23.45■■□□□ 1.35
COL5A3-201ENST00000264828 PLCB2Q00722 1185 aa23.44■■□□□ 1.34
COL5A3-201ENST00000264828 PLEKHD1A6NEE1 506 aa23.43■■□□□ 1.34
COL5A3-201ENST00000264828 KIF27Q86VH2 1401 aa23.43■■□□□ 1.34
COL5A3-201ENST00000264828 PPP1R15AO75807 674 aaPredicted RBP23.42■■□□□ 1.34
COL5A3-201ENST00000264828 ERICH6BQ5W0A0 696 aa23.41■■□□□ 1.34
COL5A3-201ENST00000264828 NOP58Q9Y2X3 529 aaKnown RBP23.41■■□□□ 1.34
COL5A3-201ENST00000264828 CFAP53Q96M91 514 aa23.4■■□□□ 1.34
COL5A3-201ENST00000264828 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.33
COL5A3-201ENST00000264828 BAZ1AQ9NRL2 1556 aaPredicted RBP23.38■■□□□ 1.33
COL5A3-201ENST00000264828 FRAT1Q92837 279 aaPredicted RBP23.36■■□□□ 1.33
COL5A3-201ENST00000264828 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
COL5A3-201ENST00000264828 PPP4R2Q9NY27 417 aa23.34■■□□□ 1.33
COL5A3-201ENST00000264828 HSP90AB1P08238 724 aaKnown RBP23.32■■□□□ 1.32
COL5A3-201ENST00000264828 CARD11Q9BXL7 1154 aa23.32■■□□□ 1.32
COL5A3-201ENST00000264828 B4GALNT3Q6L9W6 998 aa23.31■■□□□ 1.32
COL5A3-201ENST00000264828 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
COL5A3-201ENST00000264828 MAPK8IP3Q9UPT6 1336 aa23.27■■□□□ 1.32
COL5A3-201ENST00000264828 CC2D1BQ5T0F9 858 aaKnown RBP23.27■■□□□ 1.32
COL5A3-201ENST00000264828 ARID4BQ4LE39 1312 aaPredicted RBP23.27■■□□□ 1.32
COL5A3-201ENST00000264828 CFDP1Q9UEE9 299 aaPredicted RBP23.27■■□□□ 1.32
COL5A3-201ENST00000264828 TNIKQ9UKE5 1360 aa23.24■■□□□ 1.31
COL5A3-201ENST00000264828 SPRYD3Q8NCJ5 442 aa23.23■■□□□ 1.31
COL5A3-201ENST00000264828 SIN3AQ96ST3 1273 aa23.23■■□□□ 1.31
COL5A3-201ENST00000264828 HAP1P54257 671 aaPredicted RBP23.22■■□□□ 1.31
COL5A3-201ENST00000264828 CDCA8Q53HL2 280 aa23.21■■□□□ 1.31
COL5A3-201ENST00000264828 CECR2Q9BXF3 1484 aa23.21■■□□□ 1.31
COL5A3-201ENST00000264828 NAP1L2Q9ULW6 460 aaPredicted RBP23.21■■□□□ 1.31
COL5A3-201ENST00000264828 OS9Q13438 667 aaPredicted RBP23.19■■□□□ 1.3
COL5A3-201ENST00000264828 AMER1Q5JTC6 1135 aaPredicted RBP23.17■■□□□ 1.3
COL5A3-201ENST00000264828 GOLGA6L6A8MZA4 724 aa23.17■■□□□ 1.3
COL5A3-201ENST00000264828 FGD1P98174 961 aa23.17■■□□□ 1.3
COL5A3-201ENST00000264828 DEKP35659 375 aaKnown RBP23.16■■□□□ 1.3
COL5A3-201ENST00000264828 U2SURPO15042 1029 aaKnown RBP23.14■■□□□ 1.29
COL5A3-201ENST00000264828 NUDCQ9Y266 331 aa23.14■■□□□ 1.29
COL5A3-201ENST00000264828 KCNJ4P48050 445 aa23.13■■□□□ 1.29
COL5A3-201ENST00000264828 HSCBQ8IWL3 235 aa23.13■■□□□ 1.29
COL5A3-201ENST00000264828 CUX2O14529 1486 aa23.11■■□□□ 1.29
COL5A3-201ENST00000264828 LMOD2Q6P5Q4 547 aa23.1■■□□□ 1.29
COL5A3-201ENST00000264828 MSNP26038 577 aaKnown RBP23.08■■□□□ 1.29
COL5A3-201ENST00000264828 POGKQ9P215 609 aa23.07■■□□□ 1.28
COL5A3-201ENST00000264828 CCNB3Q8WWL7 1395 aa23.06■■□□□ 1.28
COL5A3-201ENST00000264828 GOLGA6L4A6NEF3 574 aa23.06■■□□□ 1.28
COL5A3-201ENST00000264828 CHAF1AQ13111 956 aaPredicted RBP23.05■■□□□ 1.28
COL5A3-201ENST00000264828 DRC7Q8IY82 874 aa23.04■■□□□ 1.28
COL5A3-201ENST00000264828 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
COL5A3-201ENST00000264828 NPHP1O15259 732 aa23.03■■□□□ 1.28
COL5A3-201ENST00000264828 L1TD1Q5T7N2 865 aaKnown RBP23.02■■□□□ 1.28
COL5A3-201ENST00000264828 RBM19Q9Y4C8 960 aaKnown RBP23.01■■□□□ 1.27
COL5A3-201ENST00000264828 NRDCO43847 1150 aa23.01■■□□□ 1.27
COL5A3-201ENST00000264828 SOGA1O94964 1423 aa23.01■■□□□ 1.27
COL5A3-201ENST00000264828 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
COL5A3-201ENST00000264828 ARID3AQ99856 593 aa23■■□□□ 1.27
COL5A3-201ENST00000264828 CHMP4BQ9H444 224 aaKnown RBP23■■□□□ 1.27
COL5A3-201ENST00000264828 ABCC8Q09428 1581 aa23■■□□□ 1.27
COL5A3-201ENST00000264828 MS4A1P11836 297 aa23■■□□□ 1.27
COL5A3-201ENST00000264828 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms