RNA–Protein interactions for RNA: ENST00000264779.6

GPBP1-201, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-201ENST00000264779 FAM212AQ96EL1 285 aa9.65□□□□□ -0.87
GPBP1-201ENST00000264779 CCDC61Q9Y6R9 512 aa9.65□□□□□ -0.87
GPBP1-201ENST00000264779 CLCN6P51797 869 aa9.6□□□□□ -0.87
GPBP1-201ENST00000264779 DCAF8Q5TAQ9 597 aa9.6□□□□□ -0.87
GPBP1-201ENST00000264779 SPOCK2Q92563 424 aa9.6□□□□□ -0.87
GPBP1-201ENST00000264779 GALR2O43603 387 aaPredicted RBP9.59□□□□□ -0.87
GPBP1-201ENST00000264779 KIF12Q96FN5 646 aa9.55□□□□□ -0.88
GPBP1-201ENST00000264779 MS4A3Q96HJ5 214 aa9.55□□□□□ -0.88
GPBP1-201ENST00000264779 MAP3K13O43283 966 aa9.54□□□□□ -0.88
GPBP1-201ENST00000264779 GSE1Q14687 1217 aa9.52□□□□□ -0.88
GPBP1-201ENST00000264779 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.88
GPBP1-201ENST00000264779 CIZ1Q9ULV3 898 aaPredicted RBP9.52□□□□□ -0.88
GPBP1-201ENST00000264779 PYGBP11216 843 aa9.52□□□□□ -0.89
GPBP1-201ENST00000264779 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
GPBP1-201ENST00000264779 POTEIP0CG38 1075 aa9.48□□□□□ -0.89
GPBP1-201ENST00000264779 IFNL1Q8IU54 200 aa9.45□□□□□ -0.9
GPBP1-201ENST00000264779 TRPC6Q9Y210 931 aa9.45□□□□□ -0.9
GPBP1-201ENST00000264779 SGIP1Q9BQI5 828 aa9.44□□□□□ -0.9
GPBP1-201ENST00000264779 PCDHB8Q9UN66 801 aa9.4□□□□□ -0.9
GPBP1-201ENST00000264779 ATMINO43313 823 aaPredicted RBP9.39□□□□□ -0.91
GPBP1-201ENST00000264779 CHRM1P11229 460 aaPredicted RBP9.39□□□□□ -0.91
GPBP1-201ENST00000264779 ASTLQ6HA08 431 aaPredicted RBP9.39□□□□□ -0.91
GPBP1-201ENST00000264779 BMP2KQ9NSY1 1161 aaPredicted RBP9.39□□□□□ -0.91
GPBP1-201ENST00000264779 TIE1P35590 1138 aa9.37□□□□□ -0.91
GPBP1-201ENST00000264779 PELP1Q8IZL8 1130 aaKnown RBP9.37□□□□□ -0.91
GPBP1-201ENST00000264779 ATN1P54259 1190 aaPredicted RBP9.36□□□□□ -0.91
GPBP1-201ENST00000264779 ZNF467Q7Z7K2 595 aaPredicted RBP9.36□□□□□ -0.91
GPBP1-201ENST00000264779 TTLL13PA6NNM8 815 aa9.35□□□□□ -0.91
GPBP1-201ENST00000264779 TRIM41Q8WV44 630 aa9.35□□□□□ -0.91
GPBP1-201ENST00000264779 TMEM106CQ9BVX2 250 aa9.34□□□□□ -0.91
GPBP1-201ENST00000264779 TRIM35Q9UPQ4 493 aa9.3□□□□□ -0.92
GPBP1-201ENST00000264779 METRNQ9UJH8 293 aa9.29□□□□□ -0.92
GPBP1-201ENST00000264779 PKD2Q13563 968 aa9.29□□□□□ -0.92
GPBP1-201ENST00000264779 SLC39A7Q92504 469 aa9.29□□□□□ -0.92
GPBP1-201ENST00000264779 ECM2O94769 699 aaPredicted RBP9.28□□□□□ -0.92
GPBP1-201ENST00000264779 PSEN1P49768 467 aa9.28□□□□□ -0.92
GPBP1-201ENST00000264779 PDAP1Q13442 181 aaKnown RBP9.27□□□□□ -0.92
GPBP1-201ENST00000264779 RNF25Q96BH1 459 aaPredicted RBP9.27□□□□□ -0.92
GPBP1-201ENST00000264779 C7P10643 843 aa9.26□□□□□ -0.93
GPBP1-201ENST00000264779 RIOK3O14730 519 aaKnown RBP9.25□□□□□ -0.93
GPBP1-201ENST00000264779 LHX8Q68G74 356 aa9.25□□□□□ -0.93
GPBP1-201ENST00000264779 SEC24BO95487 1268 aa9.21□□□□□ -0.94
GPBP1-201ENST00000264779 GOLGA2Q08379 1002 aa9.21□□□□□ -0.94
GPBP1-201ENST00000264779 IER5LQ5T953 404 aa9.2□□□□□ -0.94
GPBP1-201ENST00000264779 POTEB2H3BUK9 544 aa9.19□□□□□ -0.94
GPBP1-201ENST00000264779 RGL2O15211 777 aa9.19□□□□□ -0.94
GPBP1-201ENST00000264779 COLQQ9Y215 455 aaPredicted RBP9.19□□□□□ -0.94
GPBP1-201ENST00000264779 POTEFA5A3E0 1075 aa9.19□□□□□ -0.94
GPBP1-201ENST00000264779 VGFO15240 615 aaPredicted RBP9.18□□□□□ -0.94
GPBP1-201ENST00000264779 CABP2Q9NPB3 220 aa9.18□□□□□ -0.94
GPBP1-201ENST00000264779 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.17□□□□□ -0.94
GPBP1-201ENST00000264779 ZFP91Q96JP5 570 aaPredicted RBP9.17□□□□□ -0.94
GPBP1-201ENST00000264779 MKRN3Q13064 507 aaKnown RBP9.17□□□□□ -0.94
GPBP1-201ENST00000264779 PLCG2P16885 1265 aa9.15□□□□□ -0.94
GPBP1-201ENST00000264779 IRX5P78411 483 aaPredicted RBP9.14□□□□□ -0.95
GPBP1-201ENST00000264779 TAOK2Q9UL54 1235 aa9.14□□□□□ -0.95
GPBP1-201ENST00000264779 BCL11BQ9C0K0 894 aaPredicted RBP9.12□□□□□ -0.95
GPBP1-201ENST00000264779 POTEJP0CG39 1038 aa9.11□□□□□ -0.95
GPBP1-201ENST00000264779 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
GPBP1-201ENST00000264779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.11□□□□□ -0.953e-7■■■□□ 15.9
GPBP1-201ENST00000264779 STK25O00506 426 aa9.1□□□□□ -0.95
GPBP1-201ENST00000264779 EFCAB3Q8N7B9 438 aa9.1□□□□□ -0.95
GPBP1-201ENST00000264779 STK24Q9Y6E0 443 aa9.09□□□□□ -0.95
GPBP1-201ENST00000264779 PDCD7Q8N8D1 485 aaKnown RBP9.08□□□□□ -0.96
GPBP1-201ENST00000264779 OTUD5Q96G74 571 aa9.08□□□□□ -0.96
GPBP1-201ENST00000264779 MAMSTRQ6ZN01 415 aa9.04□□□□□ -0.96
GPBP1-201ENST00000264779 SCUBE2Q9NQ36 999 aa9.04□□□□□ -0.96
GPBP1-201ENST00000264779 DPY19L2Q6NUT2 758 aa9.02□□□□□ -0.97
GPBP1-201ENST00000264779 ILDR1Q86SU0 546 aaPredicted RBP9.02□□□□□ -0.97
GPBP1-201ENST00000264779 DCAF8L2P0C7V8 631 aa9.01□□□□□ -0.97
GPBP1-201ENST00000264779 SOX12O15370 315 aa9.01□□□□□ -0.97
GPBP1-201ENST00000264779 CHGAP10645 457 aaKnown RBP9.01□□□□□ -0.97
GPBP1-201ENST00000264779 AMER1Q5JTC6 1135 aaPredicted RBP9.01□□□□□ -0.97
GPBP1-201ENST00000264779 RTN4Q9NQC3 1192 aaKnown RBP9.01□□□□□ -0.97
GPBP1-201ENST00000264779 PHF8Q9UPP1 1060 aa9.01□□□□□ -0.97
GPBP1-201ENST00000264779 HS6ST3Q8IZP7 471 aa8.98□□□□□ -0.97
GPBP1-201ENST00000264779 L3MBTL3Q96JM7 780 aaPredicted RBP8.98□□□□□ -0.97
GPBP1-201ENST00000264779 MS4A4AQ96JQ5 239 aa8.96□□□□□ -0.97
GPBP1-201ENST00000264779 G3V3G9 751 aa8.96□□□□□ -0.98
GPBP1-201ENST00000264779 NLRP6P59044 892 aa8.96□□□□□ -0.98
GPBP1-201ENST00000264779 MFRPQ9BY79 579 aa8.96□□□□□ -0.98
GPBP1-201ENST00000264779 C3orf67Q6ZVT6 689 aa8.95□□□□□ -0.98
GPBP1-201ENST00000264779 BOLA1Q9Y3E2 137 aa8.95□□□□□ -0.98
GPBP1-201ENST00000264779 SLAIN1Q8ND83 568 aa8.94□□□□□ -0.98
GPBP1-201ENST00000264779 FBXO22Q8NEZ5 403 aa8.94□□□□□ -0.98
GPBP1-201ENST00000264779 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.94□□□□□ -0.98
GPBP1-201ENST00000264779 MICALL2Q8IY33 904 aa8.89□□□□□ -0.99
GPBP1-201ENST00000264779 NKX1-1Q15270 411 aaPredicted RBP8.87□□□□□ -0.99
GPBP1-201ENST00000264779 TMEM121BQ9BXQ6 578 aaPredicted RBP8.87□□□□□ -0.99
GPBP1-201ENST00000264779 DNAJC5Q9H3Z4 198 aa8.84□□□□□ -1
GPBP1-201ENST00000264779 PPP1R37O75864 691 aa8.83□□□□□ -1
GPBP1-201ENST00000264779 FAM163AQ96GL9 167 aaPredicted RBP8.81□□□□□ -1
GPBP1-201ENST00000264779 TMEM92Q6UXU6 159 aa8.79□□□□□ -1
GPBP1-201ENST00000264779 RYDENQ9NUL5 291 aaKnown RBP8.78□□□□□ -1
GPBP1-201ENST00000264779 SNPHO15079 494 aa8.76□□□□□ -1.01
GPBP1-201ENST00000264779 LCE2DQ5TA82 110 aaPredicted RBP8.76□□□□□ -1.01
GPBP1-201ENST00000264779 GTPBP6O43824 516 aaPredicted RBP8.75□□□□□ -1.01
GPBP1-201ENST00000264779 ST18O60284 1047 aa8.73□□□□□ -1.01
GPBP1-201ENST00000264779 BBXQ8WY36 941 aaPredicted RBP8.72□□□□□ -1.01
GPBP1-201ENST00000264779 C2orf72A6NCS6 295 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms