RNA–Protein interactions for RNA: ENST00000261917.3

HCN4-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN4, Length 7,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4-201ENST00000261917 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
HCN4-201ENST00000261917 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
HCN4-201ENST00000261917 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
HCN4-201ENST00000261917 LMOD2Q6P5Q4 547 aa24.16■■□□□ 1.46
HCN4-201ENST00000261917 CDK11BP21127 795 aaKnown RBP24.16■■□□□ 1.46
HCN4-201ENST00000261917 CCDC136Q96JN2 1154 aa24.15■■□□□ 1.46
HCN4-201ENST00000261917 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.15■■□□□ 1.46
HCN4-201ENST00000261917 RGL3Q3MIN7 710 aa24.14■■□□□ 1.46
HCN4-201ENST00000261917 RRP7BPQ9NSQ0 103 aa24.14■■□□□ 1.45
HCN4-201ENST00000261917 ACIN1Q9UKV3 1341 aaKnown RBP24.13■■□□□ 1.45
HCN4-201ENST00000261917 MYH16Q9H6N6 1097 aa24.12■■□□□ 1.45
HCN4-201ENST00000261917 MRS2Q9HD23 443 aa24.07■■□□□ 1.44
HCN4-201ENST00000261917 NPHP1O15259 732 aa24.07■■□□□ 1.44
HCN4-201ENST00000261917 LAS1LQ9Y4W2 734 aaKnown RBP24.05■■□□□ 1.44
HCN4-201ENST00000261917 MTUS2Q5JR59 1369 aa24.02■■□□□ 1.44
HCN4-201ENST00000261917 TRHP20396 242 aaPredicted RBP23.97■■□□□ 1.43
HCN4-201ENST00000261917 TNNT2P45379 298 aaPredicted RBP23.92■■□□□ 1.42
HCN4-201ENST00000261917 NEUROD2Q15784 382 aa23.91■■□□□ 1.42
HCN4-201ENST00000261917 NCBP3Q53F19 620 aaKnown RBP23.9■■□□□ 1.42
HCN4-201ENST00000261917 NCLP19338 710 aaKnown RBP23.87■■□□□ 1.41
HCN4-201ENST00000261917 SOX12O15370 315 aa23.86■■□□□ 1.41
HCN4-201ENST00000261917 MLECQ14165 292 aa23.85■■□□□ 1.41
HCN4-201ENST00000261917 PLEKHD1A6NEE1 506 aa23.78■■□□□ 1.4
HCN4-201ENST00000261917 POGKQ9P215 609 aa23.76■■□□□ 1.39
HCN4-201ENST00000261917 EIF4G2P78344 907 aaKnown RBP eCLIP23.75■■□□□ 1.39
HCN4-201ENST00000261917 FTSJ3Q8IY81 847 aaKnown RBP23.74■■□□□ 1.39
HCN4-201ENST00000261917 NAP1L2Q9ULW6 460 aaPredicted RBP23.73■■□□□ 1.39
HCN4-201ENST00000261917 MIER1Q8N108 512 aa23.69■■□□□ 1.38
HCN4-201ENST00000261917 CFAP53Q96M91 514 aa23.69■■□□□ 1.38
HCN4-201ENST00000261917 KNSTRNQ9Y448 316 aa23.69■■□□□ 1.38
HCN4-201ENST00000261917 CC2D1BQ5T0F9 858 aaKnown RBP23.68■■□□□ 1.38
HCN4-201ENST00000261917 OS9Q13438 667 aaPredicted RBP23.67■■□□□ 1.38
HCN4-201ENST00000261917 ZRSR1Q15695 479 aaKnown RBP23.67■■□□□ 1.38
HCN4-201ENST00000261917 ERCC6Q03468 1493 aa23.66■■□□□ 1.38
HCN4-201ENST00000261917 SAFB2Q14151 953 aaKnown RBP eCLIP23.65■■□□□ 1.38
HCN4-201ENST00000261917 GOLGA2Q08379 1002 aa23.64■■□□□ 1.38
HCN4-201ENST00000261917 U2SURPO15042 1029 aaKnown RBP23.64■■□□□ 1.37
HCN4-201ENST00000261917 ZCCHC6Q5VYS8 1495 aaKnown RBP23.64■■□□□ 1.37
HCN4-201ENST00000261917 FRAT1Q92837 279 aaPredicted RBP23.63■■□□□ 1.37
HCN4-201ENST00000261917 CLSTN1O94985 981 aa23.63■■□□□ 1.37
HCN4-201ENST00000261917 CASC1Q6TDU7 716 aa23.63■■□□□ 1.37
HCN4-201ENST00000261917 CFDP1Q9UEE9 299 aaPredicted RBP23.63■■□□□ 1.37
HCN4-201ENST00000261917 MAPK8IP3Q9UPT6 1336 aa23.62■■□□□ 1.37
HCN4-201ENST00000261917 CARD11Q9BXL7 1154 aa23.62■■□□□ 1.37
HCN4-201ENST00000261917 ISY1Q9ULR0 285 aaKnown RBP23.61■■□□□ 1.37
HCN4-201ENST00000261917 BECN1Q14457 450 aa23.59■■□□□ 1.37
HCN4-201ENST00000261917 PLCB2Q00722 1185 aa23.59■■□□□ 1.37
HCN4-201ENST00000261917 PTMAP06454 111 aaKnown RBP23.58■■□□□ 1.37
HCN4-201ENST00000261917 TRIM44Q96DX7 344 aaPredicted RBP23.57■■□□□ 1.36
HCN4-201ENST00000261917 AMER1Q5JTC6 1135 aaPredicted RBP23.54■■□□□ 1.36
HCN4-201ENST00000261917 CLIP1P30622 1438 aa23.54■■□□□ 1.36
HCN4-201ENST00000261917 FGD1P98174 961 aa23.54■■□□□ 1.36
HCN4-201ENST00000261917 DNTTIP2Q5QJE6 756 aaKnown RBP23.52■■□□□ 1.36
HCN4-201ENST00000261917 RGS3P49796 1198 aa23.51■■□□□ 1.35
HCN4-201ENST00000261917 GOLGA6L22H0YM25 854 aa23.5■■□□□ 1.35
HCN4-201ENST00000261917 KCNJ4P48050 445 aa23.5■■□□□ 1.35
HCN4-201ENST00000261917 ZNF330Q9Y3S2 320 aaPredicted RBP23.49■■□□□ 1.35
HCN4-201ENST00000261917 STK26Q9P289 416 aa23.49■■□□□ 1.35
HCN4-201ENST00000261917 GLIPR1L2Q4G1C9 344 aa23.48■■□□□ 1.35
HCN4-201ENST00000261917 PAK3O75914 559 aaPredicted RBP23.48■■□□□ 1.35
HCN4-201ENST00000261917 EIF4G1Q04637 1599 aaKnown RBP23.47■■□□□ 1.35
HCN4-201ENST00000261917 SUPT16HQ9Y5B9 1047 aaKnown RBP23.47■■□□□ 1.35
HCN4-201ENST00000261917 RSF1Q96T23 1441 aaPredicted RBP23.46■■□□□ 1.35
HCN4-201ENST00000261917 DDRGK1Q96HY6 314 aa23.45■■□□□ 1.34
HCN4-201ENST00000261917 SRPK2P78362 688 aaKnown RBP23.45■■□□□ 1.34
HCN4-201ENST00000261917 NUDCQ9Y266 331 aa23.44■■□□□ 1.34
HCN4-201ENST00000261917 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
HCN4-201ENST00000261917 CCDC9Q9Y3X0 531 aaKnown RBP23.41■■□□□ 1.34
HCN4-201ENST00000261917 SIN3AQ96ST3 1273 aa23.4■■□□□ 1.34
HCN4-201ENST00000261917 SPRYD3Q8NCJ5 442 aa23.4■■□□□ 1.34
HCN4-201ENST00000261917 APBB1O00213 710 aa23.38■■□□□ 1.33
HCN4-201ENST00000261917 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
HCN4-201ENST00000261917 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.36■■□□□ 1.33
HCN4-201ENST00000261917 GGT6Q6P531 493 aa23.35■■□□□ 1.33
HCN4-201ENST00000261917 DCAF11Q8TEB1 546 aa23.35■■□□□ 1.33
HCN4-201ENST00000261917 CSB-PGBD3P0DP91 1061 aa23.32■■□□□ 1.32
HCN4-201ENST00000261917 RTN4Q9NQC3 1192 aaKnown RBP23.29■■□□□ 1.32
HCN4-201ENST00000261917 DCAF1Q9Y4B6 1507 aa23.25■■□□□ 1.31
HCN4-201ENST00000261917 RTF1Q92541 710 aaKnown RBP23.25■■□□□ 1.31
HCN4-201ENST00000261917 RB1CC1Q8TDY2 1594 aa23.25■■□□□ 1.31
HCN4-201ENST00000261917 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
HCN4-201ENST00000261917 NUTM2DQ5VT03 806 aaPredicted RBP23.23■■□□□ 1.31
HCN4-201ENST00000261917 GOLGA3Q08378 1498 aa23.23■■□□□ 1.31
HCN4-201ENST00000261917 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
HCN4-201ENST00000261917 KANK1Q14678 1352 aa23.22■■□□□ 1.31
HCN4-201ENST00000261917 MORC1Q86VD1 984 aa23.21■■□□□ 1.31
HCN4-201ENST00000261917 FOXD1Q16676 465 aa23.21■■□□□ 1.31
HCN4-201ENST00000261917 ANO8Q9HCE9 1232 aaPredicted RBP23.18■■□□□ 1.3
HCN4-201ENST00000261917 GNL2Q13823 731 aaKnown RBP23.18■■□□□ 1.3
HCN4-201ENST00000261917 CHMP3Q9Y3E7 222 aa23.18■■□□□ 1.3
HCN4-201ENST00000261917 TMF1P82094 1093 aa23.17■■□□□ 1.3
HCN4-201ENST00000261917 CCNB3Q8WWL7 1395 aa23.17■■□□□ 1.3
HCN4-201ENST00000261917 PNNQ9H307 717 aaKnown RBP23.17■■□□□ 1.3
HCN4-201ENST00000261917 NAP1L5Q96NT1 182 aaPredicted RBP23.17■■□□□ 1.3
HCN4-201ENST00000261917 GOLGA6L4A6NEF3 574 aa23.16■■□□□ 1.3
HCN4-201ENST00000261917 B4GALNT3Q6L9W6 998 aa23.16■■□□□ 1.3
HCN4-201ENST00000261917 HDGFP51858 240 aaKnown RBP23.16■■□□□ 1.3
HCN4-201ENST00000261917 ERICH6BQ5W0A0 696 aa23.15■■□□□ 1.3
HCN4-201ENST00000261917 PDE4CQ08493 712 aa23.14■■□□□ 1.29
HCN4-201ENST00000261917 NUTM2FA1L443 756 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms