RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 TPRNQ4KMQ1 711 aa18.98■□□□□ 0.63
CUX2-201ENST00000261726 C14orf37Q86TY3 774 aa18.98■□□□□ 0.63
CUX2-201ENST00000261726 NCLP19338 710 aaKnown RBP18.96■□□□□ 0.63
CUX2-201ENST00000261726 MRS2Q9HD23 443 aa18.95■□□□□ 0.62
CUX2-201ENST00000261726 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
CUX2-201ENST00000261726 TRIM44Q96DX7 344 aaPredicted RBP18.93■□□□□ 0.62
CUX2-201ENST00000261726 HIRIP3Q9BW71 556 aaPredicted RBP18.87■□□□□ 0.61
CUX2-201ENST00000261726 RSF1Q96T23 1441 aaPredicted RBP18.85■□□□□ 0.61
CUX2-201ENST00000261726 BECN1Q14457 450 aa18.85■□□□□ 0.61
CUX2-201ENST00000261726 PTMAP06454 111 aaKnown RBP18.85■□□□□ 0.61
CUX2-201ENST00000261726 ZRSR1Q15695 479 aaKnown RBP18.84■□□□□ 0.61
CUX2-201ENST00000261726 TAOK2Q9UL54 1235 aa18.84■□□□□ 0.61
CUX2-201ENST00000261726 SENP3-EIF4A1A0A087X0R7 540 aa18.83■□□□□ 0.6
CUX2-201ENST00000261726 GOLGA6L22H0YM25 854 aa18.82■□□□□ 0.6
CUX2-201ENST00000261726 DNTTIP2Q5QJE6 756 aaKnown RBP18.81■□□□□ 0.6
CUX2-201ENST00000261726 DDRGK1Q96HY6 314 aa18.79■□□□□ 0.6
CUX2-201ENST00000261726 HAP1P54257 671 aaPredicted RBP18.78■□□□□ 0.6
CUX2-201ENST00000261726 PPP1R15AO75807 674 aaPredicted RBP18.77■□□□□ 0.6
CUX2-201ENST00000261726 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
CUX2-201ENST00000261726 TSPY4P0CV99 314 aa18.74■□□□□ 0.59
CUX2-201ENST00000261726 TSPY10P0CW01 314 aa18.74■□□□□ 0.59
CUX2-201ENST00000261726 NCBP3Q53F19 620 aaKnown RBP18.74■□□□□ 0.59
CUX2-201ENST00000261726 CECR2Q9BXF3 1484 aa18.74■□□□□ 0.59
CUX2-201ENST00000261726 PPM1GO15355 546 aaPredicted RBP18.72■□□□□ 0.59
CUX2-201ENST00000261726 CASC1Q6TDU7 716 aa18.71■□□□□ 0.59
CUX2-201ENST00000261726 PLCB2Q00722 1185 aa18.7■□□□□ 0.58
CUX2-201ENST00000261726 ANP32EQ9BTT0 268 aa18.68■□□□□ 0.58
CUX2-201ENST00000261726 LAS1LQ9Y4W2 734 aaKnown RBP18.68■□□□□ 0.58
CUX2-201ENST00000261726 MIER1Q8N108 512 aa18.67■□□□□ 0.58
CUX2-201ENST00000261726 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
CUX2-201ENST00000261726 FTSJ3Q8IY81 847 aaKnown RBP18.66■□□□□ 0.58
CUX2-201ENST00000261726 NPHP1O15259 732 aa18.65■□□□□ 0.58
CUX2-201ENST00000261726 NAP1L5Q96NT1 182 aaPredicted RBP18.65■□□□□ 0.58
CUX2-201ENST00000261726 RTN4Q9NQC3 1192 aaKnown RBP18.63■□□□□ 0.57
CUX2-201ENST00000261726 EIF4G2P78344 907 aaKnown RBP eCLIP18.63■□□□□ 0.57
CUX2-201ENST00000261726 RGL3Q3MIN7 710 aa18.62■□□□□ 0.57
CUX2-201ENST00000261726 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
CUX2-201ENST00000261726 RRP7BPQ9NSQ0 103 aa18.62■□□□□ 0.57
CUX2-201ENST00000261726 NEUROD2Q15784 382 aa18.61■□□□□ 0.57
CUX2-201ENST00000261726 CFAP53Q96M91 514 aa18.6■□□□□ 0.57
CUX2-201ENST00000261726 NAP1L2Q9ULW6 460 aaPredicted RBP18.59■□□□□ 0.57
CUX2-201ENST00000261726 MTUS2Q5JR59 1369 aa18.59■□□□□ 0.57
CUX2-201ENST00000261726 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
CUX2-201ENST00000261726 MROH2BQ7Z745 1585 aa18.58■□□□□ 0.57
CUX2-201ENST00000261726 LMOD2Q6P5Q4 547 aa18.58■□□□□ 0.56
CUX2-201ENST00000261726 ARID4BQ4LE39 1312 aaPredicted RBP18.56■□□□□ 0.56
CUX2-201ENST00000261726 FGD1P98174 961 aa18.55■□□□□ 0.56
CUX2-201ENST00000261726 CLSTN1O94985 981 aa18.55■□□□□ 0.56
CUX2-201ENST00000261726 OS9Q13438 667 aaPredicted RBP18.54■□□□□ 0.56
CUX2-201ENST00000261726 WIZO95785 1651 aa18.54■□□□□ 0.56
CUX2-201ENST00000261726 RGS3P49796 1198 aa18.53■□□□□ 0.56
CUX2-201ENST00000261726 GOLGA6L6A8MZA4 724 aa18.53■□□□□ 0.56
CUX2-201ENST00000261726 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
CUX2-201ENST00000261726 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
CUX2-201ENST00000261726 CHMP7Q8WUX9 453 aaPredicted RBP18.51■□□□□ 0.55
CUX2-201ENST00000261726 FRAT1Q92837 279 aaPredicted RBP18.51■□□□□ 0.55
CUX2-201ENST00000261726 MAPK8IP3Q9UPT6 1336 aa18.51■□□□□ 0.55
CUX2-201ENST00000261726 SUPT16HQ9Y5B9 1047 aaKnown RBP18.5■□□□□ 0.55
CUX2-201ENST00000261726 AMER1Q5JTC6 1135 aaPredicted RBP18.5■□□□□ 0.55
CUX2-201ENST00000261726 BAZ1BQ9UIG0 1483 aaKnown RBP18.5■□□□□ 0.55
CUX2-201ENST00000261726 KCNJ4P48050 445 aa18.49■□□□□ 0.55
CUX2-201ENST00000261726 ERICH6BQ5W0A0 696 aa18.49■□□□□ 0.55
CUX2-201ENST00000261726 GOLGA2Q08379 1002 aa18.48■□□□□ 0.55
CUX2-201ENST00000261726 ISY1Q9ULR0 285 aaKnown RBP18.41■□□□□ 0.54
CUX2-201ENST00000261726 GOLGA6L4A6NEF3 574 aa18.4■□□□□ 0.54
CUX2-201ENST00000261726 NRDCO43847 1150 aa18.4■□□□□ 0.54
CUX2-201ENST00000261726 CDCA8Q53HL2 280 aa18.4■□□□□ 0.54
CUX2-201ENST00000261726 CARD11Q9BXL7 1154 aa18.4■□□□□ 0.54
CUX2-201ENST00000261726 POGKQ9P215 609 aa18.4■□□□□ 0.54
CUX2-201ENST00000261726 NUDCQ9Y266 331 aa18.39■□□□□ 0.54
CUX2-201ENST00000261726 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
CUX2-201ENST00000261726 SPRYD3Q8NCJ5 442 aa18.39■□□□□ 0.53
CUX2-201ENST00000261726 CC2D1BQ5T0F9 858 aaKnown RBP18.38■□□□□ 0.53
CUX2-201ENST00000261726 DRC7Q8IY82 874 aa18.37■□□□□ 0.53
CUX2-201ENST00000261726 CHAF1AQ13111 956 aaPredicted RBP18.35■□□□□ 0.53
CUX2-201ENST00000261726 NOP58Q9Y2X3 529 aaKnown RBP18.35■□□□□ 0.53
CUX2-201ENST00000261726 SOX12O15370 315 aa18.34■□□□□ 0.53
CUX2-201ENST00000261726 PLEKHD1A6NEE1 506 aa18.33■□□□□ 0.52
CUX2-201ENST00000261726 HSCBQ8IWL3 235 aa18.32■□□□□ 0.52
CUX2-201ENST00000261726 SMARCA4P51532 1647 aa18.32■□□□□ 0.52
CUX2-201ENST00000261726 MSNP26038 577 aaKnown RBP18.3■□□□□ 0.52
CUX2-201ENST00000261726 CCDC88BA6NC98 1476 aa18.29■□□□□ 0.52
CUX2-201ENST00000261726 CHMP4BQ9H444 224 aaKnown RBP18.29■□□□□ 0.52
CUX2-201ENST00000261726 PPP4R2Q9NY27 417 aa18.28■□□□□ 0.52
CUX2-201ENST00000261726 GNL2Q13823 731 aaKnown RBP18.28■□□□□ 0.52
CUX2-201ENST00000261726 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
CUX2-201ENST00000261726 PNNQ9H307 717 aaKnown RBP18.26■□□□□ 0.51
CUX2-201ENST00000261726 CLIP1P30622 1438 aa18.26■□□□□ 0.51
CUX2-201ENST00000261726 TOP2AP11388 1531 aaKnown RBP18.25■□□□□ 0.51
CUX2-201ENST00000261726 MCCP23508 829 aa18.25■□□□□ 0.51
CUX2-201ENST00000261726 ARID3AQ99856 593 aa18.24■□□□□ 0.51
CUX2-201ENST00000261726 APBB1O00213 710 aa18.24■□□□□ 0.51
CUX2-201ENST00000261726 MS4A1P11836 297 aa18.24■□□□□ 0.51
CUX2-201ENST00000261726 CFDP1Q9UEE9 299 aaPredicted RBP18.23■□□□□ 0.51
CUX2-201ENST00000261726 PRM3Q9NNZ6 103 aa18.22■□□□□ 0.51
CUX2-201ENST00000261726 SMARCA2P51531 1590 aa18.21■□□□□ 0.51
CUX2-201ENST00000261726 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
CUX2-201ENST00000261726 NOC3LQ8WTT2 800 aaKnown RBP18.21■□□□□ 0.51
CUX2-201ENST00000261726 KIAA2012Q0VF49 1180 aa18.2■□□□□ 0.5
CUX2-201ENST00000261726 WRNQ14191 1432 aaPredicted RBP eCLIP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms