RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 TSPYL2Q9H2G4 693 aaPredicted RBP10.09□□□□□ -0.79
CDRT1-201ENST00000261644 FKBP8Q14318 412 aa10.08□□□□□ -0.8
CDRT1-201ENST00000261644 ATMINO43313 823 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-201ENST00000261644 RASEFQ8IZ41 740 aa10.06□□□□□ -0.8
CDRT1-201ENST00000261644 PELP1Q8IZL8 1130 aaKnown RBP10.06□□□□□ -0.8
CDRT1-201ENST00000261644 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
CDRT1-201ENST00000261644 SLC39A7Q92504 469 aa10.05□□□□□ -0.8
CDRT1-201ENST00000261644 C7P10643 843 aa10.04□□□□□ -0.8
CDRT1-201ENST00000261644 SGIP1Q9BQI5 828 aa10.03□□□□□ -0.8
CDRT1-201ENST00000261644 POTEB2H3BUK9 544 aa10.01□□□□□ -0.81
CDRT1-201ENST00000261644 NUBP1P53384 320 aa10.01□□□□□ -0.81
CDRT1-201ENST00000261644 METRNQ9UJH8 293 aa10.01□□□□□ -0.81
CDRT1-201ENST00000261644 TIE1P35590 1138 aa10□□□□□ -0.81
CDRT1-201ENST00000261644 OTUD5Q96G74 571 aa10□□□□□ -0.81
CDRT1-201ENST00000261644 MAP3K13O43283 966 aa9.99□□□□□ -0.81
CDRT1-201ENST00000261644 FBXO3Q9UK99 471 aa9.99□□□□□ -0.81
CDRT1-201ENST00000261644 ATN1P54259 1190 aaPredicted RBP9.96□□□□□ -0.82
CDRT1-201ENST00000261644 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.82
CDRT1-201ENST00000261644 FAM212AQ96EL1 285 aa9.94□□□□□ -0.82
CDRT1-201ENST00000261644 MAMSTRQ6ZN01 415 aa9.92□□□□□ -0.82
CDRT1-201ENST00000261644 TRPC6Q9Y210 931 aa9.92□□□□□ -0.82
CDRT1-201ENST00000261644 TTLL13PA6NNM8 815 aa9.89□□□□□ -0.83
CDRT1-201ENST00000261644 PCDHB13Q9Y5F0 798 aa9.89□□□□□ -0.83
CDRT1-201ENST00000261644 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
CDRT1-201ENST00000261644 IER5LQ5T953 404 aa9.88□□□□□ -0.83
CDRT1-201ENST00000261644 POTEFA5A3E0 1075 aa9.86□□□□□ -0.83
CDRT1-201ENST00000261644 IFNL1Q8IU54 200 aa9.84□□□□□ -0.83
CDRT1-201ENST00000261644 VASPP50552 380 aaPredicted RBP9.83□□□□□ -0.84
CDRT1-201ENST00000261644 SCUBE2Q9NQ36 999 aa9.82□□□□□ -0.84
CDRT1-201ENST00000261644 TRIM35Q9UPQ4 493 aa9.81□□□□□ -0.84
CDRT1-201ENST00000261644 COLQQ9Y215 455 aaPredicted RBP9.77□□□□□ -0.85
CDRT1-201ENST00000261644 SEC24BO95487 1268 aa9.76□□□□□ -0.85
CDRT1-201ENST00000261644 GSE1Q14687 1217 aa9.76□□□□□ -0.85
CDRT1-201ENST00000261644 DCAF8Q5TAQ9 597 aa9.76□□□□□ -0.85
CDRT1-201ENST00000261644 TMEM106CQ9BVX2 250 aa9.76□□□□□ -0.85
CDRT1-201ENST00000261644 CHRM1P11229 460 aaPredicted RBP9.74□□□□□ -0.85
CDRT1-201ENST00000261644 PYGBP11216 843 aa9.72□□□□□ -0.85
CDRT1-201ENST00000261644 POTEMA6NI47 508 aa9.71□□□□□ -0.86
CDRT1-201ENST00000261644 IRX5P78411 483 aaPredicted RBP9.71□□□□□ -0.86
CDRT1-201ENST00000261644 ZNF467Q7Z7K2 595 aaPredicted RBP9.7□□□□□ -0.86
CDRT1-201ENST00000261644 KLHL34Q8N239 644 aa9.7□□□□□ -0.86
CDRT1-201ENST00000261644 PCDH10Q9P2E7 1040 aa9.69□□□□□ -0.86
CDRT1-201ENST00000261644 LCE2DQ5TA82 110 aaPredicted RBP9.68□□□□□ -0.86
CDRT1-201ENST00000261644 POTEGQ6S5H5 508 aa9.68□□□□□ -0.86
CDRT1-201ENST00000261644 PLCG2P16885 1265 aa9.67□□□□□ -0.86
CDRT1-201ENST00000261644 OCEL1Q9H607 264 aa9.65□□□□□ -0.86
CDRT1-201ENST00000261644 PCDHB8Q9UN66 801 aa9.65□□□□□ -0.86
CDRT1-201ENST00000261644 IFNLR1Q8IU57 520 aaPredicted RBP9.62□□□□□ -0.87
CDRT1-201ENST00000261644 SPOCK2Q92563 424 aa9.62□□□□□ -0.87
CDRT1-201ENST00000261644 FAM163AQ96GL9 167 aaPredicted RBP9.57□□□□□ -0.88
CDRT1-201ENST00000261644 ILDR1Q86SU0 546 aaPredicted RBP9.56□□□□□ -0.88
CDRT1-201ENST00000261644 PDCD7Q8N8D1 485 aaKnown RBP9.56□□□□□ -0.88
CDRT1-201ENST00000261644 SLAIN1Q8ND83 568 aa9.56□□□□□ -0.88
CDRT1-201ENST00000261644 PSEN1P49768 467 aa9.55□□□□□ -0.88
CDRT1-201ENST00000261644 TRIM41Q8WV44 630 aa9.55□□□□□ -0.88
CDRT1-201ENST00000261644 PDAP1Q13442 181 aaKnown RBP9.54□□□□□ -0.88
CDRT1-201ENST00000261644 PLSCR2Q9NRY7 297 aa9.54□□□□□ -0.88
CDRT1-201ENST00000261644 MKRN3Q13064 507 aaKnown RBP9.53□□□□□ -0.88
CDRT1-201ENST00000261644 GOLGA2Q08379 1002 aa9.52□□□□□ -0.89
CDRT1-201ENST00000261644 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.51□□□□□ -0.89
CDRT1-201ENST00000261644 L3MBTL3Q96JM7 780 aaPredicted RBP9.5□□□□□ -0.89
CDRT1-201ENST00000261644 CIZ1Q9ULV3 898 aaPredicted RBP9.49□□□□□ -0.89
CDRT1-201ENST00000261644 SNPHO15079 494 aa9.48□□□□□ -0.89
CDRT1-201ENST00000261644 TMEM121BQ9BXQ6 578 aaPredicted RBP9.48□□□□□ -0.89
CDRT1-201ENST00000261644 ST18O60284 1047 aa9.47□□□□□ -0.89
CDRT1-201ENST00000261644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDRT1-201ENST00000261644 C3orf67Q6ZVT6 689 aa9.44□□□□□ -0.9
CDRT1-201ENST00000261644 CABP2Q9NPB3 220 aa9.4□□□□□ -0.9
CDRT1-201ENST00000261644 CDAN1Q8IWY9 1227 aa9.39□□□□□ -0.91
CDRT1-201ENST00000261644 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
CDRT1-201ENST00000261644 RIOK3O14730 519 aaKnown RBP9.33□□□□□ -0.92
CDRT1-201ENST00000261644 DPY19L2Q6NUT2 758 aa9.33□□□□□ -0.92
CDRT1-201ENST00000261644 G3V3G9 751 aa9.31□□□□□ -0.92
CDRT1-201ENST00000261644 RNF25Q96BH1 459 aaPredicted RBP9.31□□□□□ -0.92
CDRT1-201ENST00000261644 VGFO15240 615 aaPredicted RBP9.3□□□□□ -0.92
CDRT1-201ENST00000261644 SOX12O15370 315 aa9.3□□□□□ -0.92
CDRT1-201ENST00000261644 EFCAB3Q8N7B9 438 aa9.3□□□□□ -0.92
CDRT1-201ENST00000261644 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
CDRT1-201ENST00000261644 HOXB3P14651 431 aaPredicted RBP9.25□□□□□ -0.93
CDRT1-201ENST00000261644 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
CDRT1-201ENST00000261644 TAOK2Q9UL54 1235 aa9.25□□□□□ -0.93
CDRT1-201ENST00000261644 EMP3P54852 163 aa9.24□□□□□ -0.93
CDRT1-201ENST00000261644 MARVELD3Q96A59 401 aa9.24□□□□□ -0.93
CDRT1-201ENST00000261644 MICALL2Q8IY33 904 aa9.22□□□□□ -0.93
CDRT1-201ENST00000261644 DOK7Q18PE1 504 aa9.21□□□□□ -0.94
CDRT1-201ENST00000261644 MS4A4AQ96JQ5 239 aa9.21□□□□□ -0.94
CDRT1-201ENST00000261644 HOXB1P14653 301 aaPredicted RBP9.2□□□□□ -0.94
CDRT1-201ENST00000261644 SPNS2Q8IVW8 549 aa9.18□□□□□ -0.94
CDRT1-201ENST00000261644 HS3ST6Q96QI5 342 aa9.18□□□□□ -0.94
CDRT1-201ENST00000261644 ZSWIM6Q9HCJ5 1215 aa9.18□□□□□ -0.94
CDRT1-201ENST00000261644 POTEB3A0JP26 581 aa9.16□□□□□ -0.94
CDRT1-201ENST00000261644 POTEBQ6S5H4 581 aa9.16□□□□□ -0.94
CDRT1-201ENST00000261644 FBXO22Q8NEZ5 403 aa9.16□□□□□ -0.94
CDRT1-201ENST00000261644 PHF8Q9UPP1 1060 aa9.16□□□□□ -0.94
CDRT1-201ENST00000261644 RIMBP2O15034 1052 aa9.15□□□□□ -0.94
CDRT1-201ENST00000261644 NLRP6P59044 892 aa9.15□□□□□ -0.94
CDRT1-201ENST00000261644 MMRN1Q13201 1228 aa9.15□□□□□ -0.94
CDRT1-201ENST00000261644 TMEM92Q6UXU6 159 aa9.15□□□□□ -0.94
CDRT1-201ENST00000261644 FAM205CA6NFA0 338 aa9.14□□□□□ -0.95
CDRT1-201ENST00000261644 ZNF710Q8N1W2 664 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms