RNA–Protein interactions for RNA: ENST00000256062.9

TMTC1-201, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene TMTC1, Length 8,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-201ENST00000256062 PPP1R15AO75807 674 aaPredicted RBP11.66□□□□□ -0.54
TMTC1-201ENST00000256062 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
TMTC1-201ENST00000256062 KCNH8Q96L42 1107 aa11.64□□□□□ -0.55
TMTC1-201ENST00000256062 PPM1GO15355 546 aaPredicted RBP11.63□□□□□ -0.55
TMTC1-201ENST00000256062 MYH16Q9H6N6 1097 aa11.63□□□□□ -0.55
TMTC1-201ENST00000256062 LMOD2Q6P5Q4 547 aa11.62□□□□□ -0.55
TMTC1-201ENST00000256062 ARID4BQ4LE39 1312 aaPredicted RBP11.6□□□□□ -0.55
TMTC1-201ENST00000256062 NCLP19338 710 aaKnown RBP11.6□□□□□ -0.55
TMTC1-201ENST00000256062 RGL3Q3MIN7 710 aa11.59□□□□□ -0.55
TMTC1-201ENST00000256062 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
TMTC1-201ENST00000256062 TSPY4P0CV99 314 aa11.58□□□□□ -0.56
TMTC1-201ENST00000256062 TSPY10P0CW01 314 aa11.58□□□□□ -0.56
TMTC1-201ENST00000256062 RRP7BPQ9NSQ0 103 aa11.57□□□□□ -0.56
TMTC1-201ENST00000256062 NEUROD2Q15784 382 aa11.57□□□□□ -0.56
TMTC1-201ENST00000256062 LAS1LQ9Y4W2 734 aaKnown RBP11.56□□□□□ -0.56
TMTC1-201ENST00000256062 NPHP1O15259 732 aa11.54□□□□□ -0.56
TMTC1-201ENST00000256062 CHMP7Q8WUX9 453 aaPredicted RBP11.52□□□□□ -0.56
TMTC1-201ENST00000256062 TNNT2P45379 298 aaPredicted RBP11.51□□□□□ -0.57
TMTC1-201ENST00000256062 GLIPR1L2Q4G1C9 344 aa11.49□□□□□ -0.57
TMTC1-201ENST00000256062 SOX12O15370 315 aa11.48□□□□□ -0.57
TMTC1-201ENST00000256062 MIER1Q8N108 512 aa11.48□□□□□ -0.57
TMTC1-201ENST00000256062 PTMAP06454 111 aaKnown RBP11.47□□□□□ -0.57
TMTC1-201ENST00000256062 PLCB2Q00722 1185 aa11.47□□□□□ -0.57
TMTC1-201ENST00000256062 ZRSR1Q15695 479 aaKnown RBP11.47□□□□□ -0.57
TMTC1-201ENST00000256062 NAP1L2Q9ULW6 460 aaPredicted RBP11.46□□□□□ -0.58
TMTC1-201ENST00000256062 MTUS2Q5JR59 1369 aa11.45□□□□□ -0.58
TMTC1-201ENST00000256062 TRIM44Q96DX7 344 aaPredicted RBP11.45□□□□□ -0.58
TMTC1-201ENST00000256062 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
TMTC1-201ENST00000256062 CLSTN1O94985 981 aa11.44□□□□□ -0.58
TMTC1-201ENST00000256062 FRAT1Q92837 279 aaPredicted RBP11.43□□□□□ -0.58
TMTC1-201ENST00000256062 RGS3P49796 1198 aa11.43□□□□□ -0.58
TMTC1-201ENST00000256062 DNTTIP2Q5QJE6 756 aaKnown RBP11.42□□□□□ -0.58
TMTC1-201ENST00000256062 EIF4G2P78344 907 aaKnown RBP eCLIP11.42□□□□□ -0.58
TMTC1-201ENST00000256062 FTSJ3Q8IY81 847 aaKnown RBP11.42□□□□□ -0.58
TMTC1-201ENST00000256062 RTN4Q9NQC3 1192 aaKnown RBP11.42□□□□□ -0.58
TMTC1-201ENST00000256062 OS9Q13438 667 aaPredicted RBP11.41□□□□□ -0.58
TMTC1-201ENST00000256062 BECN1Q14457 450 aa11.41□□□□□ -0.58
TMTC1-201ENST00000256062 ISY1Q9ULR0 285 aaKnown RBP11.41□□□□□ -0.58
TMTC1-201ENST00000256062 CFAP53Q96M91 514 aa11.41□□□□□ -0.58
TMTC1-201ENST00000256062 MLECQ14165 292 aa11.4□□□□□ -0.58
TMTC1-201ENST00000256062 GOLGA6L22H0YM25 854 aa11.4□□□□□ -0.58
TMTC1-201ENST00000256062 POGKQ9P215 609 aa11.39□□□□□ -0.59
TMTC1-201ENST00000256062 FGD1P98174 961 aa11.38□□□□□ -0.59
TMTC1-201ENST00000256062 KNSTRNQ9Y448 316 aa11.38□□□□□ -0.59
TMTC1-201ENST00000256062 MAPK8IP3Q9UPT6 1336 aa11.38□□□□□ -0.59
TMTC1-201ENST00000256062 U2SURPO15042 1029 aaKnown RBP11.38□□□□□ -0.59
TMTC1-201ENST00000256062 TRHP20396 242 aaPredicted RBP11.37□□□□□ -0.59
TMTC1-201ENST00000256062 CC2D1BQ5T0F9 858 aaKnown RBP11.37□□□□□ -0.59
TMTC1-201ENST00000256062 SAFB2Q14151 953 aaKnown RBP eCLIP11.36□□□□□ -0.59
TMTC1-201ENST00000256062 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
TMTC1-201ENST00000256062 PLEKHD1A6NEE1 506 aa11.36□□□□□ -0.59
TMTC1-201ENST00000256062 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
TMTC1-201ENST00000256062 CARD11Q9BXL7 1154 aa11.35□□□□□ -0.59
TMTC1-201ENST00000256062 KCNJ4P48050 445 aa11.35□□□□□ -0.59
TMTC1-201ENST00000256062 SUPT16HQ9Y5B9 1047 aaKnown RBP11.34□□□□□ -0.59
TMTC1-201ENST00000256062 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
TMTC1-201ENST00000256062 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
TMTC1-201ENST00000256062 ZNF330Q9Y3S2 320 aaPredicted RBP11.33□□□□□ -0.6
TMTC1-201ENST00000256062 APBB1O00213 710 aa11.32□□□□□ -0.6
TMTC1-201ENST00000256062 NAP1L5Q96NT1 182 aaPredicted RBP11.31□□□□□ -0.6
TMTC1-201ENST00000256062 SCRIBQ14160 1630 aa11.31□□□□□ -0.6
TMTC1-201ENST00000256062 CFDP1Q9UEE9 299 aaPredicted RBP11.3□□□□□ -0.6
TMTC1-201ENST00000256062 NUDCQ9Y266 331 aa11.29□□□□□ -0.6
TMTC1-201ENST00000256062 HSP90AB1P08238 724 aaKnown RBP11.28□□□□□ -0.6
TMTC1-201ENST00000256062 SIN3AQ96ST3 1273 aa11.27□□□□□ -0.6
TMTC1-201ENST00000256062 ERICH6BQ5W0A0 696 aa11.27□□□□□ -0.6
TMTC1-201ENST00000256062 PDE4CQ08493 712 aa11.27□□□□□ -0.61
TMTC1-201ENST00000256062 STK26Q9P289 416 aa11.24□□□□□ -0.61
TMTC1-201ENST00000256062 GOLGA6L4A6NEF3 574 aa11.23□□□□□ -0.61
TMTC1-201ENST00000256062 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
TMTC1-201ENST00000256062 SRPK2P78362 688 aaKnown RBP11.23□□□□□ -0.61
TMTC1-201ENST00000256062 CDCA8Q53HL2 280 aa11.23□□□□□ -0.61
TMTC1-201ENST00000256062 CLIP1P30622 1438 aa11.22□□□□□ -0.61
TMTC1-201ENST00000256062 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
TMTC1-201ENST00000256062 B4GALNT3Q6L9W6 998 aa11.22□□□□□ -0.61
TMTC1-201ENST00000256062 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
TMTC1-201ENST00000256062 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
TMTC1-201ENST00000256062 ARID3AQ99856 593 aa11.22□□□□□ -0.61
TMTC1-201ENST00000256062 ANP32EQ9BTT0 268 aa11.21□□□□□ -0.61
TMTC1-201ENST00000256062 CSB-PGBD3P0DP91 1061 aa11.21□□□□□ -0.62
TMTC1-201ENST00000256062 ZCCHC6Q5VYS8 1495 aaKnown RBP11.2□□□□□ -0.62
TMTC1-201ENST00000256062 GOLGA6L6A8MZA4 724 aa11.19□□□□□ -0.62
TMTC1-201ENST00000256062 PRM3Q9NNZ6 103 aa11.19□□□□□ -0.62
TMTC1-201ENST00000256062 DRC7Q8IY82 874 aa11.19□□□□□ -0.62
TMTC1-201ENST00000256062 GNL2Q13823 731 aaKnown RBP11.18□□□□□ -0.62
TMTC1-201ENST00000256062 DCAF11Q8TEB1 546 aa11.18□□□□□ -0.62
TMTC1-201ENST00000256062 GGT6Q6P531 493 aa11.17□□□□□ -0.62
TMTC1-201ENST00000256062 MORC1Q86VD1 984 aa11.16□□□□□ -0.62
TMTC1-201ENST00000256062 HSCBQ8IWL3 235 aa11.14□□□□□ -0.63
TMTC1-201ENST00000256062 RTF1Q92541 710 aaKnown RBP11.14□□□□□ -0.63
TMTC1-201ENST00000256062 CHMP3Q9Y3E7 222 aa11.14□□□□□ -0.63
TMTC1-201ENST00000256062 PNNQ9H307 717 aaKnown RBP11.13□□□□□ -0.63
TMTC1-201ENST00000256062 NUTM2DQ5VT03 806 aaPredicted RBP11.13□□□□□ -0.63
TMTC1-201ENST00000256062 NOP58Q9Y2X3 529 aaKnown RBP11.13□□□□□ -0.63
TMTC1-201ENST00000256062 NRDCO43847 1150 aa11.12□□□□□ -0.63
TMTC1-201ENST00000256062 PPP4R2Q9NY27 417 aa11.12□□□□□ -0.63
TMTC1-201ENST00000256062 NOL8Q76FK4 1167 aaKnown RBP11.12□□□□□ -0.63
TMTC1-201ENST00000256062 RSF1Q96T23 1441 aaPredicted RBP11.12□□□□□ -0.63
TMTC1-201ENST00000256062 FOXD1Q16676 465 aa11.11□□□□□ -0.63
TMTC1-201ENST00000256062 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms