RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 DNTTIP2Q5QJE6 756 aaKnown RBP17.52■□□□□ 0.39
NEK9-201ENST00000238616 IRX6P78412 446 aaPredicted RBP17.51■□□□□ 0.39
NEK9-201ENST00000238616 DDX10Q13206 875 aaKnown RBP17.5■□□□□ 0.39
NEK9-201ENST00000238616 PPM1GO15355 546 aaPredicted RBP17.5■□□□□ 0.39
NEK9-201ENST00000238616 CHIC2Q9UKJ5 165 aa17.49■□□□□ 0.39
NEK9-201ENST00000238616 PPP1R15AO75807 674 aaPredicted RBP17.49■□□□□ 0.39
NEK9-201ENST00000238616 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
NEK9-201ENST00000238616 PTMAP06454 111 aaKnown RBP17.47■□□□□ 0.39
NEK9-201ENST00000238616 LMOD2Q6P5Q4 547 aa17.46■□□□□ 0.39
NEK9-201ENST00000238616 KAT6BQ8WYB5 2073 aa17.46■□□□□ 0.38
NEK9-201ENST00000238616 SENP3-EIF4A1A0A087X0R7 540 aa17.45■□□□□ 0.38
NEK9-201ENST00000238616 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
NEK9-201ENST00000238616 LAS1LQ9Y4W2 734 aaKnown RBP17.42■□□□□ 0.38
NEK9-201ENST00000238616 GOLGA2Q08379 1002 aa17.41■□□□□ 0.38
NEK9-201ENST00000238616 PLCB2Q00722 1185 aa17.4■□□□□ 0.38
NEK9-201ENST00000238616 TNNT2P45379 298 aaPredicted RBP17.39■□□□□ 0.37
NEK9-201ENST00000238616 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
NEK9-201ENST00000238616 PRM3Q9NNZ6 103 aa17.36■□□□□ 0.37
NEK9-201ENST00000238616 ISY1Q9ULR0 285 aaKnown RBP17.36■□□□□ 0.37
NEK9-201ENST00000238616 HIRIP3Q9BW71 556 aaPredicted RBP17.36■□□□□ 0.37
NEK9-201ENST00000238616 ACIN1Q9UKV3 1341 aaKnown RBP17.36■□□□□ 0.37
NEK9-201ENST00000238616 BECN1Q14457 450 aa17.36■□□□□ 0.37
NEK9-201ENST00000238616 AMER1Q5JTC6 1135 aaPredicted RBP17.36■□□□□ 0.37
NEK9-201ENST00000238616 GOLGA6L22H0YM25 854 aa17.35■□□□□ 0.37
NEK9-201ENST00000238616 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
NEK9-201ENST00000238616 FGD1P98174 961 aa17.32■□□□□ 0.36
NEK9-201ENST00000238616 MRS2Q9HD23 443 aa17.32■□□□□ 0.36
NEK9-201ENST00000238616 OS9Q13438 667 aaPredicted RBP17.28■□□□□ 0.36
NEK9-201ENST00000238616 KCNH8Q96L42 1107 aa17.27■□□□□ 0.36
NEK9-201ENST00000238616 KCNJ4P48050 445 aa17.24■□□□□ 0.35
NEK9-201ENST00000238616 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
NEK9-201ENST00000238616 TSPY4P0CV99 314 aa17.22■□□□□ 0.35
NEK9-201ENST00000238616 TSPY10P0CW01 314 aa17.22■□□□□ 0.35
NEK9-201ENST00000238616 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
NEK9-201ENST00000238616 RGL3Q3MIN7 710 aa17.22■□□□□ 0.35
NEK9-201ENST00000238616 DDRGK1Q96HY6 314 aa17.2■□□□□ 0.34
NEK9-201ENST00000238616 GOLGA6L6A8MZA4 724 aa17.19■□□□□ 0.34
NEK9-201ENST00000238616 NAP1L5Q96NT1 182 aaPredicted RBP17.19■□□□□ 0.34
NEK9-201ENST00000238616 ANO8Q9HCE9 1232 aaPredicted RBP17.18■□□□□ 0.34
NEK9-201ENST00000238616 SOX12O15370 315 aa17.17■□□□□ 0.34
NEK9-201ENST00000238616 RTN4Q9NQC3 1192 aaKnown RBP17.16■□□□□ 0.34
NEK9-201ENST00000238616 PDE4CQ08493 712 aa17.16■□□□□ 0.34
NEK9-201ENST00000238616 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
NEK9-201ENST00000238616 ERICH6BQ5W0A0 696 aa17.13■□□□□ 0.33
NEK9-201ENST00000238616 HSP90AB1P08238 724 aaKnown RBP17.13■□□□□ 0.33
NEK9-201ENST00000238616 DRC7Q8IY82 874 aa17.12■□□□□ 0.33
NEK9-201ENST00000238616 NOC3LQ8WTT2 800 aaKnown RBP17.12■□□□□ 0.33
NEK9-201ENST00000238616 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
NEK9-201ENST00000238616 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
NEK9-201ENST00000238616 GNL2Q13823 731 aaKnown RBP17.1■□□□□ 0.33
NEK9-201ENST00000238616 RRP7BPQ9NSQ0 103 aa17.1■□□□□ 0.33
NEK9-201ENST00000238616 FRAT1Q92837 279 aaPredicted RBP17.09■□□□□ 0.33
NEK9-201ENST00000238616 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
NEK9-201ENST00000238616 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.08■□□□□ 0.32
NEK9-201ENST00000238616 KNSTRNQ9Y448 316 aa17.08■□□□□ 0.32
NEK9-201ENST00000238616 GOLGA6L4A6NEF3 574 aa17.07■□□□□ 0.32
NEK9-201ENST00000238616 MAPK8IP3Q9UPT6 1336 aa17.07■□□□□ 0.32
NEK9-201ENST00000238616 MTUS2Q5JR59 1369 aa17.06■□□□□ 0.32
NEK9-201ENST00000238616 POGKQ9P215 609 aa17.06■□□□□ 0.32
NEK9-201ENST00000238616 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
NEK9-201ENST00000238616 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
NEK9-201ENST00000238616 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
NEK9-201ENST00000238616 RGS3P49796 1198 aa17.04■□□□□ 0.32
NEK9-201ENST00000238616 NRDCO43847 1150 aa17.04■□□□□ 0.32
NEK9-201ENST00000238616 ZNF330Q9Y3S2 320 aaPredicted RBP17.04■□□□□ 0.32
NEK9-201ENST00000238616 U2SURPO15042 1029 aaKnown RBP17.03■□□□□ 0.32
NEK9-201ENST00000238616 FBXO3Q9UK99 471 aa17.02■□□□□ 0.32
NEK9-201ENST00000238616 CHAF1AQ13111 956 aaPredicted RBP17.01■□□□□ 0.31
NEK9-201ENST00000238616 EIF4G2P78344 907 aaKnown RBP eCLIP16.99■□□□□ 0.31
NEK9-201ENST00000238616 PNNQ9H307 717 aaKnown RBP16.99■□□□□ 0.31
NEK9-201ENST00000238616 ARID3AQ99856 593 aa16.99■□□□□ 0.31
NEK9-201ENST00000238616 KRI1Q8N9T8 703 aaKnown RBP16.98■□□□□ 0.31
NEK9-201ENST00000238616 TMX4Q9H1E5 349 aaPredicted RBP16.97■□□□□ 0.31
NEK9-201ENST00000238616 CC2D1BQ5T0F9 858 aaKnown RBP16.96■□□□□ 0.31
NEK9-201ENST00000238616 MLECQ14165 292 aa16.96■□□□□ 0.31
NEK9-201ENST00000238616 APBB1O00213 710 aa16.94■□□□□ 0.3
NEK9-201ENST00000238616 A0A0U1RQG5 324 aaPredicted RBP16.93■□□□□ 0.3
NEK9-201ENST00000238616 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
NEK9-201ENST00000238616 G3V3G9 751 aa16.92■□□□□ 0.3
NEK9-201ENST00000238616 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
NEK9-201ENST00000238616 CREBRFQ8IUR6 639 aa16.92■□□□□ 0.3
NEK9-201ENST00000238616 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
NEK9-201ENST00000238616 SUPT16HQ9Y5B9 1047 aaKnown RBP16.91■□□□□ 0.3
NEK9-201ENST00000238616 MSNP26038 577 aaKnown RBP16.91■□□□□ 0.3
NEK9-201ENST00000238616 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
NEK9-201ENST00000238616 SAFB2Q14151 953 aaKnown RBP eCLIP16.9■□□□□ 0.3
NEK9-201ENST00000238616 L1TD1Q5T7N2 865 aaKnown RBP16.89■□□□□ 0.29
NEK9-201ENST00000238616 MIER1Q8N108 512 aa16.88■□□□□ 0.29
NEK9-201ENST00000238616 CHMP3Q9Y3E7 222 aa16.88■□□□□ 0.29
NEK9-201ENST00000238616 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
NEK9-201ENST00000238616 WWC1Q8IX03 1113 aa16.87■□□□□ 0.29
NEK9-201ENST00000238616 MCCP23508 829 aa16.86■□□□□ 0.29
NEK9-201ENST00000238616 CDCA8Q53HL2 280 aa16.86■□□□□ 0.29
NEK9-201ENST00000238616 HSCBQ8IWL3 235 aa16.86■□□□□ 0.29
NEK9-201ENST00000238616 CARD11Q9BXL7 1154 aa16.85■□□□□ 0.29
NEK9-201ENST00000238616 RTF1Q92541 710 aaKnown RBP16.84■□□□□ 0.29
NEK9-201ENST00000238616 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.29
NEK9-201ENST00000238616 HSP90B1P14625 803 aaKnown RBP16.82■□□□□ 0.28
NEK9-201ENST00000238616 KIAA1211Q6ZU35 1233 aa16.82■□□□□ 0.28
NEK9-201ENST00000238616 PLEKHD1A6NEE1 506 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms