RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 PKD1L1Q8TDX9 2849 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 IZUMO1RA6ND01 250 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 KRTAP4-16G5E9R7 235 aaPredicted RBP5.45□□□□□ -1.54
SCARB2-209ENST00000638409 PEX7O00628 323 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 PYYP10082 97 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 UBE2L3P68036 154 aaKnown RBP5.45□□□□□ -1.54
SCARB2-209ENST00000638409 EBLN2Q6P2I7 272 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 C9orf47Q6ZRZ4 202 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 GTSF1LQ9H1H1 148 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 IGLC1P0CG04 106 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 PMCHL1Q16048 86 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 GPHB5Q86YW7 130 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 ZC2HC1AQ96GY0 325 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 C21orf62Q9NYP8 219 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 M0R2Z0 102 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 INAFM2P0DMQ5 153 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 DNAJC30Q96LL9 226 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 TRAV26-2A0A0B4J265 109 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 LGALS9O00182 355 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 HERVK_113P63121 156 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 EXOC3-AS1Q8N2X6 119 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 FAM167A-AS1Q96KT0 104 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 ARL2-SNX15V9GYD0 113 aa5.44□□□□□ -1.54
SCARB2-209ENST00000638409 TAS2R45P59539 299 aa5.43□□□□□ -1.54
SCARB2-209ENST00000638409 MPV17L2Q567V2 206 aa5.43□□□□□ -1.54
SCARB2-209ENST00000638409 NUP35Q8NFH5 326 aa5.43□□□□□ -1.54
SCARB2-209ENST00000638409 CTSGP08311 255 aa5.43□□□□□ -1.54
SCARB2-209ENST00000638409 ORMDL2Q53FV1 153 aa5.43□□□□□ -1.54
SCARB2-209ENST00000638409 OVOL1O14753 267 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 PAX4O43316 350 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 IGHV3-23P01764 117 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 INSL3P51460 131 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 UBE2G1P62253 170 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 TWIST1Q15672 202 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 KPRPQ5T749 579 aaPredicted RBP5.42□□□□□ -1.54
SCARB2-209ENST00000638409 C7orf33Q8WU49 177 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 ZNF414Q96IQ9 312 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 EPM2AB3EWF7 344 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 CFC1BP0CG36 223 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 ANKRD29Q8N6D5 301 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 S4R3C0 116 aa5.42□□□□□ -1.54
SCARB2-209ENST00000638409 DNAH3Q8TD57 4116 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 MUC21A0A0G2JKD1 596 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 MUC21A0A140T8X8 626 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 C2orf70A6NJV1 201 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 KNCNA6PVL3 124 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 HIGD1CA8MV81 97 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 FNDC10F2Z333 226 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 NDUFA4O00483 81 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 FOXA3P55318 350 aaPredicted RBP5.41□□□□□ -1.54
SCARB2-209ENST00000638409 BVES-AS1Q5T3Y7 98 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 PAXXQ9BUH6 204 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 SND1-IT1Q9HBX3 110 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 MRPL36Q9P0J6 103 aaKnown RBP5.41□□□□□ -1.54
SCARB2-209ENST00000638409 IGHV3-21A0A0B4J1V1 117 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 PATE2Q6UY27 113 aa5.41□□□□□ -1.54
SCARB2-209ENST00000638409 PRB4P10163 310 aaPredicted RBP5.4□□□□□ -1.54
SCARB2-209ENST00000638409 C10orf113Q5VZT2 155 aa5.4□□□□□ -1.54
SCARB2-209ENST00000638409 UNQ9165/PRO28630Q6UXU0 137 aa5.4□□□□□ -1.54
SCARB2-209ENST00000638409 MRPL32Q9BYC8 188 aaKnown RBP5.4□□□□□ -1.54
SCARB2-209ENST00000638409 LINC00322Q6ZN03 302 aaPredicted RBP5.4□□□□□ -1.55
SCARB2-209ENST00000638409 TIMM8BQ9Y5J9 83 aaPredicted RBP5.4□□□□□ -1.55
SCARB2-209ENST00000638409 IGLV7-46A0A075B6I9 117 aa5.39□□□□□ -1.55
SCARB2-209ENST00000638409 IGKV1-17P01599 117 aa5.39□□□□□ -1.55
SCARB2-209ENST00000638409 SLC25A5P05141 298 aaKnown RBP5.39□□□□□ -1.55
SCARB2-209ENST00000638409 IGKV1D-37A0A075B6S9 117 aa5.39□□□□□ -1.55
SCARB2-209ENST00000638409 A0A087WX48 190 aa5.39□□□□□ -1.55
SCARB2-209ENST00000638409 IGHV1-24A0A0C4DH33 117 aa5.39□□□□□ -1.55
SCARB2-209ENST00000638409 RPL7P18124 248 aaKnown RBP5.39□□□□□ -1.55
SCARB2-209ENST00000638409 RASL11AQ6T310 242 aa5.39□□□□□ -1.55
SCARB2-209ENST00000638409 TMEM70Q9BUB7 260 aa5.39□□□□□ -1.55
SCARB2-209ENST00000638409 CYSLTR1Q9Y271 337 aa5.39□□□□□ -1.55
SCARB2-209ENST00000638409 M0R381 172 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 IGLV1-51P01701 117 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 SMIM17P0DL12 118 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 EMP1P54849 157 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 HSD52Q0P140 79 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 CASC10Q5T4H9 136 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 LINC00305Q7Z4B0 112 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 TRGV9Q99603 122 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 PMCHL2Q9BQD1 86 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 NANOS2P60321 138 aaKnown RBP5.38□□□□□ -1.55
SCARB2-209ENST00000638409 HBBP68871 147 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 GTF2H5Q6ZYL4 71 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 C20orf203Q8NBC4 194 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 RPP21Q9H633 154 aaKnown RBP5.38□□□□□ -1.55
SCARB2-209ENST00000638409 WNK1Q9H4A3 2382 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 SYS1-DBNDD2H3BUS1 97 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 SCGB1C2P0DMR2 95 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 LINC00313P59037 77 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 EPDR1Q9UM22 224 aa5.38□□□□□ -1.55
SCARB2-209ENST00000638409 A0A1B0GUV1 79 aa5.37□□□□□ -1.55
SCARB2-209ENST00000638409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.37□□□□□ -1.55
SCARB2-209ENST00000638409 TRAV8-1A0A0A6YYK1 113 aa5.37□□□□□ -1.55
SCARB2-209ENST00000638409 C7orf71A4D174 169 aa5.37□□□□□ -1.55
SCARB2-209ENST00000638409 KRTAP10-11P60412 298 aa5.37□□□□□ -1.55
SCARB2-209ENST00000638409 DEFB114Q30KQ6 69 aa5.37□□□□□ -1.55
SCARB2-209ENST00000638409 MGAM2Q2M2H8 2515 aa5.36□□□□□ -1.55
SCARB2-209ENST00000638409 FBN3Q75N90 2809 aa5.36□□□□□ -1.55
SCARB2-209ENST00000638409 IGHV7-4-1A0A0J9YVY3 117 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms