RNA–Protein interactions for RNA: ENST00000626619.2

SOX2-OT-239, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 660 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-239ENST00000626619 H7C1H1 209 aa8.96□□□□□ -0.98
SOX2-OT-239ENST00000626619 SRP19P09132 144 aaKnown RBP8.96□□□□□ -0.98
SOX2-OT-239ENST00000626619 Q0VG73 95 aa8.96□□□□□ -0.98
SOX2-OT-239ENST00000626619 FAM210AQ96ND0 272 aa8.96□□□□□ -0.98
SOX2-OT-239ENST00000626619 SMIM7Q9BQ49 75 aa8.96□□□□□ -0.98
SOX2-OT-239ENST00000626619 EIF5A2Q9GZV4 153 aaKnown RBP8.96□□□□□ -0.98
SOX2-OT-239ENST00000626619 PRSS1P07477 247 aa8.95□□□□□ -0.98
SOX2-OT-239ENST00000626619 SRSF3P84103 164 aaKnown RBP8.95□□□□□ -0.98
SOX2-OT-239ENST00000626619 WDR73Q6P4I2 378 aa8.95□□□□□ -0.98
SOX2-OT-239ENST00000626619 FAM231DQ6ZW35 169 aa8.95□□□□□ -0.98
SOX2-OT-239ENST00000626619 SCXQ7RTU7 201 aa8.95□□□□□ -0.98
SOX2-OT-239ENST00000626619 LINC01551Q86U37 167 aa8.95□□□□□ -0.98
SOX2-OT-239ENST00000626619 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.95□□□□□ -0.98
SOX2-OT-239ENST00000626619 TMEM243Q9BU79 118 aa8.95□□□□□ -0.98
SOX2-OT-239ENST00000626619 HERC1Q15751 4861 aa8.95□□□□□ -0.98
SOX2-OT-239ENST00000626619 FLG2Q5D862 2391 aaPredicted RBP8.95□□□□□ -0.98
SOX2-OT-239ENST00000626619 J3QL48 77 aa8.94□□□□□ -0.98
SOX2-OT-239ENST00000626619 TMEM97Q5BJF2 176 aa8.94□□□□□ -0.98
SOX2-OT-239ENST00000626619 AMTP48728 403 aa8.93□□□□□ -0.98
SOX2-OT-239ENST00000626619 REG3AQ06141 175 aa8.93□□□□□ -0.98
SOX2-OT-239ENST00000626619 MIAQ16674 131 aa8.93□□□□□ -0.98
SOX2-OT-239ENST00000626619 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.92□□□□□ -0.98
SOX2-OT-239ENST00000626619 IGKV2-29A2NJV5 120 aaPredicted RBP8.92□□□□□ -0.98
SOX2-OT-239ENST00000626619 ZNF727A8MUV8 499 aa8.92□□□□□ -0.98
SOX2-OT-239ENST00000626619 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
SOX2-OT-239ENST00000626619 HIGD1CA8MV81 97 aa8.91□□□□□ -0.98
SOX2-OT-239ENST00000626619 A8MWL6 223 aa8.91□□□□□ -0.98
SOX2-OT-239ENST00000626619 PKIAP61925 76 aa8.91□□□□□ -0.98
SOX2-OT-239ENST00000626619 COTL1Q14019 142 aa8.91□□□□□ -0.98
SOX2-OT-239ENST00000626619 RNF185Q96GF1 192 aa8.91□□□□□ -0.98
SOX2-OT-239ENST00000626619 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
SOX2-OT-239ENST00000626619 IGKV3OR2-268A0A0C4DH90 116 aa8.9□□□□□ -0.98
SOX2-OT-239ENST00000626619 SMKR1H3BMG3 65 aa8.9□□□□□ -0.98
SOX2-OT-239ENST00000626619 FAM229AH3BQW9 127 aa8.9□□□□□ -0.98
SOX2-OT-239ENST00000626619 PANO1I0J062 215 aa8.9□□□□□ -0.98
SOX2-OT-239ENST00000626619 RPS10P46783 165 aaKnown RBP8.9□□□□□ -0.98
SOX2-OT-239ENST00000626619 CT83Q5H943 113 aa8.9□□□□□ -0.98
SOX2-OT-239ENST00000626619 CIRBP-AS1Q8TBR5 109 aa8.9□□□□□ -0.98
SOX2-OT-239ENST00000626619 TSKUQ8WUA8 353 aa8.9□□□□□ -0.98
SOX2-OT-239ENST00000626619 V9GYV3 84 aa8.9□□□□□ -0.98
SOX2-OT-239ENST00000626619 SDHAF1A6NFY7 115 aa8.89□□□□□ -0.99
SOX2-OT-239ENST00000626619 RPL23P62829 140 aaKnown RBP8.89□□□□□ -0.99
SOX2-OT-239ENST00000626619 CHAC1Q9BUX1 264 aa8.89□□□□□ -0.99
SOX2-OT-239ENST00000626619 A0A1B0GUT8 65 aa8.88□□□□□ -0.99
SOX2-OT-239ENST00000626619 A0A1B0GUV1 79 aa8.88□□□□□ -0.99
SOX2-OT-239ENST00000626619 FAM231BA6NCW3 169 aa8.88□□□□□ -0.99
SOX2-OT-239ENST00000626619 UBE2L6O14933 153 aa8.88□□□□□ -0.99
SOX2-OT-239ENST00000626619 NCR2O95944 276 aa8.88□□□□□ -0.99
SOX2-OT-239ENST00000626619 AMN1Q8IY45 258 aa8.88□□□□□ -0.99
SOX2-OT-239ENST00000626619 ISOC2Q96AB3 205 aa8.88□□□□□ -0.99
SOX2-OT-239ENST00000626619 OSTCQ9NRP0 149 aa8.88□□□□□ -0.99
SOX2-OT-239ENST00000626619 TMEM242Q9NWH2 141 aa8.88□□□□□ -0.99
SOX2-OT-239ENST00000626619 TSHBP01222 138 aa8.87□□□□□ -0.99
SOX2-OT-239ENST00000626619 SLPIP03973 132 aa8.87□□□□□ -0.99
SOX2-OT-239ENST00000626619 KRTAP10-4P60372 401 aaPredicted RBP8.87□□□□□ -0.99
SOX2-OT-239ENST00000626619 C14orf177Q52M58 125 aa8.87□□□□□ -0.99
SOX2-OT-239ENST00000626619 SMIM15Q7Z3B0 74 aa8.87□□□□□ -0.99
SOX2-OT-239ENST00000626619 NUP35Q8NFH5 326 aa8.87□□□□□ -0.99
SOX2-OT-239ENST00000626619 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.87□□□□□ -0.99
SOX2-OT-239ENST00000626619 GAGE12HA6NDE8 117 aa8.86□□□□□ -0.99
SOX2-OT-239ENST00000626619 RAB4AP20338 218 aa8.86□□□□□ -0.99
SOX2-OT-239ENST00000626619 ADIRFQ15847 76 aa8.86□□□□□ -0.99
SOX2-OT-239ENST00000626619 TMEM241Q24JQ0 296 aa8.86□□□□□ -0.99
SOX2-OT-239ENST00000626619 TEX261Q6UWH6 196 aa8.86□□□□□ -0.99
SOX2-OT-239ENST00000626619 TRBV6-5A0A0K0K1A5 114 aa8.85□□□□□ -0.99
SOX2-OT-239ENST00000626619 NDUFS6O75380 124 aaKnown RBP8.85□□□□□ -0.99
SOX2-OT-239ENST00000626619 APCSP02743 223 aa8.85□□□□□ -0.99
SOX2-OT-239ENST00000626619 FGF6P10767 208 aa8.85□□□□□ -0.99
SOX2-OT-239ENST00000626619 RNASEKQ6P5S7 137 aaKnown RBP8.85□□□□□ -0.99
SOX2-OT-239ENST00000626619 C15orf56Q8N910 161 aa8.85□□□□□ -0.99
SOX2-OT-239ENST00000626619 TMEM191AQ9H0A3 160 aa8.85□□□□□ -0.99
SOX2-OT-239ENST00000626619 hDV102S1A0JD36 115 aa8.84□□□□□ -0.99
SOX2-OT-239ENST00000626619 BORCS7Q96B45 105 aa8.84□□□□□ -0.99
SOX2-OT-239ENST00000626619 TRAV8-4A0A0B4J246 113 aa8.83□□□□□ -1
SOX2-OT-239ENST00000626619 PMCHP20382 165 aa8.83□□□□□ -1
SOX2-OT-239ENST00000626619 HIGD2BQ4VC39 106 aa8.83□□□□□ -1
SOX2-OT-239ENST00000626619 AMMECR1LQ6DCA0 310 aa8.83□□□□□ -1
SOX2-OT-239ENST00000626619 SDIM1Q6ZPB5 146 aa8.83□□□□□ -1
SOX2-OT-239ENST00000626619 C9orf163Q8N9P6 203 aa8.83□□□□□ -1
SOX2-OT-239ENST00000626619 ST20Q9HBF5 79 aa8.83□□□□□ -1
SOX2-OT-239ENST00000626619 I3L3M4 83 aa8.82□□□□□ -1
SOX2-OT-239ENST00000626619 CHTF8P0CG12 524 aa8.82□□□□□ -1
SOX2-OT-239ENST00000626619 ESDP10768 282 aa8.82□□□□□ -1
SOX2-OT-239ENST00000626619 POLR2KP53803 58 aaKnown RBP8.82□□□□□ -1
SOX2-OT-239ENST00000626619 NRACQ8N912 160 aa8.82□□□□□ -1
SOX2-OT-239ENST00000626619 CHCHD10Q8WYQ3 142 aaPredicted RBP8.82□□□□□ -1
SOX2-OT-239ENST00000626619 NAT8Q9UHE5 227 aa8.82□□□□□ -1
SOX2-OT-239ENST00000626619 PLA2G1BP04054 148 aaKnown RBP8.81□□□□□ -1
SOX2-OT-239ENST00000626619 DGAT2L7PQ6IED9 249 aa8.81□□□□□ -1
SOX2-OT-239ENST00000626619 SMIM27A0A1W2PRY6 76 aa8.8□□□□□ -1
SOX2-OT-239ENST00000626619 CAMPP49913 170 aa8.8□□□□□ -1
SOX2-OT-239ENST00000626619 HNRNPA3P51991 378 aaKnown RBP8.8□□□□□ -1
SOX2-OT-239ENST00000626619 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
SOX2-OT-239ENST00000626619 RIGQ13278 110 aa8.8□□□□□ -1
SOX2-OT-239ENST00000626619 MRPL51Q4U2R6 128 aaKnown RBP8.8□□□□□ -1
SOX2-OT-239ENST00000626619 FAM74A3Q4VXF1 159 aa8.8□□□□□ -1
SOX2-OT-239ENST00000626619 MRAP2Q96G30 205 aa8.8□□□□□ -1
SOX2-OT-239ENST00000626619 NAT8BQ9UHF3 227 aa8.8□□□□□ -1
SOX2-OT-239ENST00000626619 TRBV27A0A0K0K1C4 114 aa8.79□□□□□ -1
SOX2-OT-239ENST00000626619 XCL1P47992 114 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms