RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 PGLYRP4Q96LB8 373 aa16.61■□□□□ 0.25
PMS1-220ENST00000618056 NIT2Q9NQR4 276 aa16.61■□□□□ 0.25
PMS1-220ENST00000618056 HSPG2P98160 4391 aa16.6■□□□□ 0.25
PMS1-220ENST00000618056 PKIAP61925 76 aa16.6■□□□□ 0.25
PMS1-220ENST00000618056 SMIM15Q7Z3B0 74 aa16.6■□□□□ 0.25
PMS1-220ENST00000618056 FRZBQ92765 325 aa16.6■□□□□ 0.25
PMS1-220ENST00000618056 SMIM27A0A1W2PRY6 76 aa16.59■□□□□ 0.25
PMS1-220ENST00000618056 CDK2AP2O75956 126 aa16.59■□□□□ 0.25
PMS1-220ENST00000618056 KLK12Q9UKR0 248 aa16.59■□□□□ 0.25
PMS1-220ENST00000618056 APOBP04114 4563 aaKnown RBP16.58■□□□□ 0.24
PMS1-220ENST00000618056 HIGD1CA8MV81 97 aa16.58■□□□□ 0.24
PMS1-220ENST00000618056 CHCHD5Q9BSY4 110 aa16.58■□□□□ 0.24
PMS1-220ENST00000618056 TMEM262E9PQX1 116 aa16.57■□□□□ 0.24
PMS1-220ENST00000618056 IQCJQ1A5X6 159 aa16.57■□□□□ 0.24
PMS1-220ENST00000618056 BORCS7Q96B45 105 aa16.57■□□□□ 0.24
PMS1-220ENST00000618056 TRBV25-1A0A075B6N4 114 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 PHOX2AO14813 284 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 HIST1H2BKO60814 126 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 HIST1H2BJP06899 126 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 HIST1H2BOP23527 126 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 HIST1H2BBP33778 126 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 HIST1H2BDP58876 126 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 HIST1H2BCP62807 126 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 HIST2H2BEQ16778 126 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.56■□□□□ 0.24
PMS1-220ENST00000618056 GATD1Q8NB37 220 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 HIST1H2BHQ93079 126 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 HIST1H2BNQ99877 126 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 HIST1H2BMQ99879 126 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 COX11Q9Y6N1 276 aa16.56■□□□□ 0.24
PMS1-220ENST00000618056 A0A1B0GUT8 65 aa16.55■□□□□ 0.24
PMS1-220ENST00000618056 SNRPEP62304 92 aaKnown RBP16.55■□□□□ 0.24
PMS1-220ENST00000618056 MPV17L2Q567V2 206 aa16.55■□□□□ 0.24
PMS1-220ENST00000618056 RMI2Q96E14 147 aa16.55■□□□□ 0.24
PMS1-220ENST00000618056 IGHV1-24A0A0C4DH33 117 aa16.54■□□□□ 0.24
PMS1-220ENST00000618056 COX19Q49B96 90 aa16.54■□□□□ 0.24
PMS1-220ENST00000618056 NAT8BQ9UHF3 227 aa16.54■□□□□ 0.24
PMS1-220ENST00000618056 TRAPPC1Q9Y5R8 145 aa16.54■□□□□ 0.24
PMS1-220ENST00000618056 C5orf52A6NGY3 159 aa16.54■□□□□ 0.24
PMS1-220ENST00000618056 UBE2WQ96B02 151 aa16.54■□□□□ 0.24
PMS1-220ENST00000618056 TRAV26-2A0A0B4J265 109 aa16.53■□□□□ 0.24
PMS1-220ENST00000618056 FUSP35637 526 aaKnown RBP eCLIP16.53■□□□□ 0.24
PMS1-220ENST00000618056 Q0VG73 95 aa16.53■□□□□ 0.24
PMS1-220ENST00000618056 NDUFA6P56556 154 aa16.52■□□□□ 0.23
PMS1-220ENST00000618056 FABP9Q0Z7S8 132 aa16.52■□□□□ 0.23
PMS1-220ENST00000618056 Q8N814 137 aa16.51■□□□□ 0.23
PMS1-220ENST00000618056 NTN5Q8WTR8 489 aaPredicted RBP16.51■□□□□ 0.23
PMS1-220ENST00000618056 TMEM191AQ9H0A3 160 aa16.51■□□□□ 0.23
PMS1-220ENST00000618056 MT-ND6P03923 174 aa16.5■□□□□ 0.23
PMS1-220ENST00000618056 MAPKAPK5-AS1Q8N8E1 139 aa16.5■□□□□ 0.23
PMS1-220ENST00000618056 NUP35Q8NFH5 326 aa16.5■□□□□ 0.23
PMS1-220ENST00000618056 IGKV2D-24A0A075B6R9 120 aa16.49■□□□□ 0.23
PMS1-220ENST00000618056 ANGP03950 147 aaKnown RBP16.49■□□□□ 0.23
PMS1-220ENST00000618056 RBX1P62877 108 aa16.49■□□□□ 0.23
PMS1-220ENST00000618056 MRPL54Q6P161 138 aaKnown RBP16.49■□□□□ 0.23
PMS1-220ENST00000618056 ENHOQ6UWT2 76 aa16.49■□□□□ 0.23
PMS1-220ENST00000618056 Q8N976 141 aa16.49■□□□□ 0.23
PMS1-220ENST00000618056 GNB1LQ9BYB4 327 aa16.49■□□□□ 0.23
PMS1-220ENST00000618056 GAGE6Q13070 117 aa16.48■□□□□ 0.23
PMS1-220ENST00000618056 COTL1Q14019 142 aa16.48■□□□□ 0.23
PMS1-220ENST00000618056 RPL39LQ96EH5 51 aaKnown RBP16.48■□□□□ 0.23
PMS1-220ENST00000618056 TMEM243Q9BU79 118 aa16.48■□□□□ 0.23
PMS1-220ENST00000618056 CRPP02741 224 aa16.48■□□□□ 0.23
PMS1-220ENST00000618056 RIGQ13278 110 aa16.48■□□□□ 0.23
PMS1-220ENST00000618056 WFDC2Q14508 124 aa16.48■□□□□ 0.23
PMS1-220ENST00000618056 ATP5L2Q7Z4Y8 100 aa16.48■□□□□ 0.23
PMS1-220ENST00000618056 MRPL18Q9H0U6 180 aaKnown RBP16.48■□□□□ 0.23
PMS1-220ENST00000618056 PRR34Q9NV39 138 aa16.47■□□□□ 0.23
PMS1-220ENST00000618056 HLA-DQA1P01909 254 aa16.46■□□□□ 0.23
PMS1-220ENST00000618056 AKR1D1P51857 326 aa16.46■□□□□ 0.23
PMS1-220ENST00000618056 TRBV6-5A0A0K0K1A5 114 aa16.45■□□□□ 0.22
PMS1-220ENST00000618056 A0A1B0GUV1 79 aa16.45■□□□□ 0.22
PMS1-220ENST00000618056 MIAQ16674 131 aa16.45■□□□□ 0.22
PMS1-220ENST00000618056 TMEM136Q6ZRR5 245 aa16.45■□□□□ 0.22
PMS1-220ENST00000618056 C1orf43Q9BWL3 253 aa16.45■□□□□ 0.22
PMS1-220ENST00000618056 IGLV5-52A0A0A0MRZ9 124 aa16.44■□□□□ 0.22
PMS1-220ENST00000618056 GCSHP23434 173 aa16.44■□□□□ 0.22
PMS1-220ENST00000618056 BAALCQ8WXS3 180 aa16.44■□□□□ 0.22
PMS1-220ENST00000618056 RNF185Q96GF1 192 aa16.44■□□□□ 0.22
PMS1-220ENST00000618056 PCLOQ9Y6V0 5065 aa16.44■□□□□ 0.22
PMS1-220ENST00000618056 SDHAF1A6NFY7 115 aa16.43■□□□□ 0.22
PMS1-220ENST00000618056 NCR2O95944 276 aa16.43■□□□□ 0.22
PMS1-220ENST00000618056 RAB4AP20338 218 aa16.43■□□□□ 0.22
PMS1-220ENST00000618056 AMTP48728 403 aa16.43■□□□□ 0.22
PMS1-220ENST00000618056 KRTAP10-1P60331 282 aa16.43■□□□□ 0.22
PMS1-220ENST00000618056 MRAP2Q96G30 205 aa16.43■□□□□ 0.22
PMS1-220ENST00000618056 DEFB104AQ8WTQ1 72 aa16.42■□□□□ 0.22
PMS1-220ENST00000618056 LECT2O14960 151 aa16.42■□□□□ 0.22
PMS1-220ENST00000618056 AMN1Q8IY45 258 aa16.42■□□□□ 0.22
PMS1-220ENST00000618056 LINC00269Q8N2A0 174 aa16.42■□□□□ 0.22
PMS1-220ENST00000618056 A0A1B0GXF2 115 aa16.41■□□□□ 0.22
PMS1-220ENST00000618056 GAS8-AS1O95177 125 aa16.41■□□□□ 0.22
PMS1-220ENST00000618056 HBBP68871 147 aa16.41■□□□□ 0.22
PMS1-220ENST00000618056 C20orf203Q8NBC4 194 aa16.41■□□□□ 0.22
PMS1-220ENST00000618056 UBE2L6O14933 153 aa16.4■□□□□ 0.22
PMS1-220ENST00000618056 COA6Q5JTJ3 125 aaKnown RBP16.4■□□□□ 0.22
PMS1-220ENST00000618056 A0A1B0GW15 77 aa16.39■□□□□ 0.21
PMS1-220ENST00000618056 ST20Q9HBF5 79 aa16.39■□□□□ 0.21
PMS1-220ENST00000618056 IGLV4-60A0A075B6I1 120 aa16.38■□□□□ 0.21
PMS1-220ENST00000618056 I3L3M4 83 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms