RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 RBMY1EA6NEQ0 496 aaKnown RBP11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 CCL24O00175 119 aa11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 RBMY1DP0C7P1 496 aaKnown RBP11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 DEFB114Q30KQ6 69 aa11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 FAM74A4Q5TZK3 123 aa11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 Q8N8P6 123 aa11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 IFI27L1Q96BM0 104 aa11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 DUSP14O95147 198 aaKnown RBP11.49□□□□□ -0.57
SEMA3B-212ENST00000616701 IGKV2D-26A0A0A0MRZ7 120 aa11.48□□□□□ -0.57
SEMA3B-212ENST00000616701 CFAP126Q5VTH2 177 aa11.48□□□□□ -0.57
SEMA3B-212ENST00000616701 JMJD1CQ15652 2540 aa11.48□□□□□ -0.57
SEMA3B-212ENST00000616701 IGHV3-16A0A0C4DH30 117 aa11.48□□□□□ -0.57
SEMA3B-212ENST00000616701 C9JAW5 83 aa11.48□□□□□ -0.57
SEMA3B-212ENST00000616701 IGHV1OR15-1A0A075B7D0 117 aa11.47□□□□□ -0.57
SEMA3B-212ENST00000616701 RNASE1P07998 156 aaKnown RBP11.47□□□□□ -0.57
SEMA3B-212ENST00000616701 CEND1Q8N111 149 aa11.47□□□□□ -0.57
SEMA3B-212ENST00000616701 MAP6D1Q9H9H5 199 aa11.47□□□□□ -0.57
SEMA3B-212ENST00000616701 OTOGQ6ZRI0 2925 aa11.47□□□□□ -0.57
SEMA3B-212ENST00000616701 F5H697 171 aa11.47□□□□□ -0.57
SEMA3B-212ENST00000616701 TMEM126AQ9H061 195 aa11.47□□□□□ -0.57
SEMA3B-212ENST00000616701 H3BMM0 161 aa11.46□□□□□ -0.57
SEMA3B-212ENST00000616701 MED14OSP0DP75 135 aa11.46□□□□□ -0.57
SEMA3B-212ENST00000616701 ODF3Q96PU9 254 aa11.46□□□□□ -0.57
SEMA3B-212ENST00000616701 DKK2Q9UBU2 259 aa11.46□□□□□ -0.57
SEMA3B-212ENST00000616701 LY6G6DO95868 133 aa11.46□□□□□ -0.57
SEMA3B-212ENST00000616701 RRN3P1Q2M238 152 aa11.46□□□□□ -0.57
SEMA3B-212ENST00000616701 NSUN5P1Q3KNT7 163 aa11.46□□□□□ -0.58
SEMA3B-212ENST00000616701 HLA-DRB4P13762 266 aa11.45□□□□□ -0.58
SEMA3B-212ENST00000616701 HLA-DRB4X5D2U9 266 aa11.45□□□□□ -0.58
SEMA3B-212ENST00000616701 SUMO2P61956 95 aaKnown RBP11.45□□□□□ -0.58
SEMA3B-212ENST00000616701 LAGE3Q14657 143 aa11.45□□□□□ -0.58
SEMA3B-212ENST00000616701 ZFP2Q6ZN57 461 aa11.45□□□□□ -0.58
SEMA3B-212ENST00000616701 SMIM2Q9BVW6 85 aa11.45□□□□□ -0.58
SEMA3B-212ENST00000616701 TRBV25-1A0A075B6N4 114 aa11.44□□□□□ -0.58
SEMA3B-212ENST00000616701 PRSS1P07477 247 aa11.44□□□□□ -0.58
SEMA3B-212ENST00000616701 LINC00315P59091 139 aa11.44□□□□□ -0.58
SEMA3B-212ENST00000616701 ZC2HC1BQ5TFG8 222 aa11.44□□□□□ -0.58
SEMA3B-212ENST00000616701 KIF25-AS1Q9Y6Z4 181 aa11.44□□□□□ -0.58
SEMA3B-212ENST00000616701 ATP6V0E2Q8NHE4 81 aa11.44□□□□□ -0.58
SEMA3B-212ENST00000616701 TMEM101Q96IK0 257 aa11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 C9orf85Q96MD7 179 aa11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 LINC01587Q99440 93 aa11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 LINC01546A6NGU7 62 aa11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 NXPH4O95158 308 aa11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 HILS1P60008 231 aa11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 SUMO4Q6EEV6 95 aa11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 TEN1Q86WV5 123 aa11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 HIST1H4GQ99525 98 aa11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 ZNF256Q9Y2P7 627 aaPredicted RBP11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 TMEM262E9PQX1 116 aa11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 FN1P02751 2386 aaKnown RBP11.43□□□□□ -0.58
SEMA3B-212ENST00000616701 IGHV3-73A0A0B4J1V6 119 aa11.42□□□□□ -0.58
SEMA3B-212ENST00000616701 GTSCR1Q86UQ5 136 aa11.42□□□□□ -0.58
SEMA3B-212ENST00000616701 ZNF56Q15929 161 aa11.41□□□□□ -0.58
SEMA3B-212ENST00000616701 ODF3L2Q3SX64 289 aa11.41□□□□□ -0.58
SEMA3B-212ENST00000616701 ZNF876PQ49A33 203 aa11.41□□□□□ -0.58
SEMA3B-212ENST00000616701 ANKRD29Q8N6D5 301 aa11.41□□□□□ -0.58
SEMA3B-212ENST00000616701 OR13C6PQ8NH95 151 aa11.41□□□□□ -0.58
SEMA3B-212ENST00000616701 HRCT1Q6UXD1 115 aa11.41□□□□□ -0.58
SEMA3B-212ENST00000616701 C10orf126Q8N4M7 172 aa11.41□□□□□ -0.58
SEMA3B-212ENST00000616701 C16orf95Q9H693 158 aa11.4□□□□□ -0.58
SEMA3B-212ENST00000616701 HIGD1BQ9P298 99 aa11.4□□□□□ -0.58
SEMA3B-212ENST00000616701 XCL2Q9UBD3 114 aa11.4□□□□□ -0.58
SEMA3B-212ENST00000616701 IGHV3OR16-12A0A075B7B8 117 aa11.4□□□□□ -0.58
SEMA3B-212ENST00000616701 INAFM1C9JVW0 142 aa11.4□□□□□ -0.58
SEMA3B-212ENST00000616701 J3KT08 172 aa11.4□□□□□ -0.59
SEMA3B-212ENST00000616701 C9orf153Q5TBE3 101 aa11.4□□□□□ -0.59
SEMA3B-212ENST00000616701 C4orf26Q17RF5 130 aa11.39□□□□□ -0.59
SEMA3B-212ENST00000616701 C15orf53Q8NAA6 179 aa11.39□□□□□ -0.59
SEMA3B-212ENST00000616701 PRADC1Q9BSG0 188 aa11.39□□□□□ -0.59
SEMA3B-212ENST00000616701 WFDC10AQ9H1F0 79 aa11.39□□□□□ -0.59
SEMA3B-212ENST00000616701 CRYGDP07320 174 aa11.38□□□□□ -0.59
SEMA3B-212ENST00000616701 HERVK_113P63121 156 aa11.38□□□□□ -0.59
SEMA3B-212ENST00000616701 C2CD3Q4AC94 2353 aa11.38□□□□□ -0.59
SEMA3B-212ENST00000616701 HHLA3Q9XRX5 114 aa11.38□□□□□ -0.59
SEMA3B-212ENST00000616701 TRGV11A0A075B6L2 103 aa11.37□□□□□ -0.59
SEMA3B-212ENST00000616701 TRAV2A0A0B4J234 112 aa11.37□□□□□ -0.59
SEMA3B-212ENST00000616701 A8MWV9 139 aa11.37□□□□□ -0.59
SEMA3B-212ENST00000616701 KRTAP10-3P60369 221 aa11.37□□□□□ -0.59
SEMA3B-212ENST00000616701 PROK1P58294 105 aa11.37□□□□□ -0.59
SEMA3B-212ENST00000616701 ADARB2-AS1A8MUL3 147 aa11.37□□□□□ -0.59
SEMA3B-212ENST00000616701 STHQ8IWL8 128 aa11.37□□□□□ -0.59
SEMA3B-212ENST00000616701 TMEM160Q9NX00 188 aa11.37□□□□□ -0.59
SEMA3B-212ENST00000616701 HIVEP1P15822 2718 aa11.36□□□□□ -0.59
SEMA3B-212ENST00000616701 SCGB3A1Q96QR1 104 aa11.36□□□□□ -0.59
SEMA3B-212ENST00000616701 LINC01549A6NIU2 74 aa11.36□□□□□ -0.59
SEMA3B-212ENST00000616701 POM121L12Q8N7R1 296 aa11.36□□□□□ -0.59
SEMA3B-212ENST00000616701 MRPL35Q9NZE8 188 aaKnown RBP11.36□□□□□ -0.59
SEMA3B-212ENST00000616701 SDHAF1A6NFY7 115 aa11.35□□□□□ -0.59
SEMA3B-212ENST00000616701 A8MTW9 85 aa11.35□□□□□ -0.59
SEMA3B-212ENST00000616701 P0DMU3 169 aa11.35□□□□□ -0.59
SEMA3B-212ENST00000616701 FAM231AP0DMU4 169 aa11.35□□□□□ -0.59
SEMA3B-212ENST00000616701 FAM231CP0DMU5 169 aa11.35□□□□□ -0.59
SEMA3B-212ENST00000616701 ORMDL2Q53FV1 153 aa11.35□□□□□ -0.59
SEMA3B-212ENST00000616701 MORN3Q6PF18 240 aaPredicted RBP11.35□□□□□ -0.59
SEMA3B-212ENST00000616701 C2orf66Q6UXQ4 117 aa11.35□□□□□ -0.59
SEMA3B-212ENST00000616701 ATP5LO75964 103 aa11.35□□□□□ -0.59
SEMA3B-212ENST00000616701 MAPKAPK5-AS1Q8N8E1 139 aa11.35□□□□□ -0.59
SEMA3B-212ENST00000616701 C1orf43Q9BWL3 253 aa11.35□□□□□ -0.59
SEMA3B-212ENST00000616701 NSD1Q96L73 2696 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms