RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 Q9H8V8 135 aa12.16□□□□□ -0.46
TRAPPC3-209ENST00000616395 ST20Q9HBF5 79 aa12.16□□□□□ -0.46
TRAPPC3-209ENST00000616395 HSPB8Q9UJY1 196 aa12.16□□□□□ -0.46
TRAPPC3-209ENST00000616395 A0A087WWL8 130 aa12.15□□□□□ -0.46
TRAPPC3-209ENST00000616395 LINC01549A6NIU2 74 aa12.15□□□□□ -0.46
TRAPPC3-209ENST00000616395 C11orf72Q8NBR9 251 aa12.15□□□□□ -0.46
TRAPPC3-209ENST00000616395 RNASE8Q8TDE3 154 aaKnown RBP12.15□□□□□ -0.46
TRAPPC3-209ENST00000616395 TRGV1A0A0A0MS02 117 aa12.14□□□□□ -0.47
TRAPPC3-209ENST00000616395 IFI27P40305 119 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC3-209ENST00000616395 SUMO2P61956 95 aaKnown RBP12.14□□□□□ -0.47
TRAPPC3-209ENST00000616395 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
TRAPPC3-209ENST00000616395 ZFP2Q6ZN57 461 aa12.14□□□□□ -0.47
TRAPPC3-209ENST00000616395 RASL10AQ92737 203 aa12.14□□□□□ -0.47
TRAPPC3-209ENST00000616395 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
TRAPPC3-209ENST00000616395 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
TRAPPC3-209ENST00000616395 F5H768 121 aa12.13□□□□□ -0.47
TRAPPC3-209ENST00000616395 LEPROTL1O95214 131 aa12.13□□□□□ -0.47
TRAPPC3-209ENST00000616395 SMR3BP02814 79 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC3-209ENST00000616395 ORMDL2Q53FV1 153 aa12.13□□□□□ -0.47
TRAPPC3-209ENST00000616395 OR4C5Q8NGB2 326 aa12.13□□□□□ -0.47
TRAPPC3-209ENST00000616395 HMCN2Q8NDA2 5059 aa12.13□□□□□ -0.47
TRAPPC3-209ENST00000616395 TRAV26-2A0A0B4J265 109 aa12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 IFITM10A6NMD0 228 aa12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 NUPR1O60356 82 aa12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 HBDP02042 147 aa12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 CRYGDP07320 174 aa12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 LINC00310P59036 64 aa12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 RPL32P62910 135 aaKnown RBP12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 SUMO4Q6EEV6 95 aa12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 NRACQ8N912 160 aa12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 SMIM2Q9BVW6 85 aa12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 MRPL16Q9NX20 251 aaKnown RBP12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 PGPEP1Q9NXJ5 209 aa12.12□□□□□ -0.47
TRAPPC3-209ENST00000616395 C20orf202A1L168 122 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 VCYO14598 125 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 RS1O15537 224 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 DEFB130BP0DP73 79 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 DEFB130AP0DP74 79 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 S100A12P80511 92 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 LAGE3Q14657 143 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 FAM19A2Q8N3H0 131 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 KIR2DL4Q99706 377 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 MAP1LC3CQ9BXW4 147 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 IGHV1-24A0A0C4DH33 117 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 TRBV6-5A0A0K0K1A5 114 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 SCGB1D1O95968 90 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 JOSD1Q15040 202 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 LINC00518Q8N0U6 118 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 DNAJC30Q96LL9 226 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 C12orf57Q99622 126 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 JPT2Q9H910 190 aa12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 NOP10Q9NPE3 64 aaKnown RBP12.11□□□□□ -0.47
TRAPPC3-209ENST00000616395 TRGV2A0A075B6R0 118 aa12.1□□□□□ -0.47
TRAPPC3-209ENST00000616395 TRAV4A0A0B4J268 109 aa12.1□□□□□ -0.47
TRAPPC3-209ENST00000616395 LINC00315P59091 139 aa12.1□□□□□ -0.47
TRAPPC3-209ENST00000616395 KRTDAPP60985 99 aa12.1□□□□□ -0.47
TRAPPC3-209ENST00000616395 CFAP126Q5VTH2 177 aa12.1□□□□□ -0.47
TRAPPC3-209ENST00000616395 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
TRAPPC3-209ENST00000616395 LINC01546A6NGU7 62 aa12.09□□□□□ -0.47
TRAPPC3-209ENST00000616395 LYRM9A8MSI8 78 aa12.09□□□□□ -0.47
TRAPPC3-209ENST00000616395 GATA1P15976 413 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC3-209ENST00000616395 FCER1GP30273 86 aa12.09□□□□□ -0.47
TRAPPC3-209ENST00000616395 KRTAP10-1P60331 282 aa12.09□□□□□ -0.47
TRAPPC3-209ENST00000616395 FAM229AH3BQW9 127 aa12.08□□□□□ -0.48
TRAPPC3-209ENST00000616395 URB1-AS1Q96HZ7 61 aa12.08□□□□□ -0.48
TRAPPC3-209ENST00000616395 M0QY20 66 aa12.07□□□□□ -0.48
TRAPPC3-209ENST00000616395 Q6ZRN7 208 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC3-209ENST00000616395 TMEM70Q9BUB7 260 aa12.07□□□□□ -0.48
TRAPPC3-209ENST00000616395 ATP5LO75964 103 aa12.06□□□□□ -0.48
TRAPPC3-209ENST00000616395 IGHV3-53P01767 116 aa12.06□□□□□ -0.48
TRAPPC3-209ENST00000616395 ATP5G1P05496 136 aa12.06□□□□□ -0.48
TRAPPC3-209ENST00000616395 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
TRAPPC3-209ENST00000616395 Q6ZSN1 163 aa12.06□□□□□ -0.48
TRAPPC3-209ENST00000616395 RPL39LQ96EH5 51 aaKnown RBP12.06□□□□□ -0.48
TRAPPC3-209ENST00000616395 GAGE12BA1L429 117 aa12.05□□□□□ -0.48
TRAPPC3-209ENST00000616395 SDHAF1A6NFY7 115 aa12.05□□□□□ -0.48
TRAPPC3-209ENST00000616395 GAGE7O76087 117 aa12.05□□□□□ -0.48
TRAPPC3-209ENST00000616395 GAGE12FP0CL80 117 aa12.05□□□□□ -0.48
TRAPPC3-209ENST00000616395 GAGE12GP0CL81 117 aa12.05□□□□□ -0.48
TRAPPC3-209ENST00000616395 GAGE12IP0CL82 117 aa12.05□□□□□ -0.48
TRAPPC3-209ENST00000616395 PMCHL1Q16048 86 aa12.05□□□□□ -0.48
TRAPPC3-209ENST00000616395 PYY3Q5JQD4 70 aa12.05□□□□□ -0.48
TRAPPC3-209ENST00000616395 IGHV3-73A0A0B4J1V6 119 aa12.04□□□□□ -0.48
TRAPPC3-209ENST00000616395 TRBV10-1A0A0K0K1A3 114 aa12.04□□□□□ -0.48
TRAPPC3-209ENST00000616395 I3L3M4 83 aa12.04□□□□□ -0.48
TRAPPC3-209ENST00000616395 PET117Q6UWS5 81 aa12.04□□□□□ -0.48
TRAPPC3-209ENST00000616395 Q6ZTI0 123 aa12.04□□□□□ -0.48
TRAPPC3-209ENST00000616395 UPK3BQ9BT76 320 aa12.04□□□□□ -0.48
TRAPPC3-209ENST00000616395 TRGV4A0A0C4DH28 118 aa12.03□□□□□ -0.48
TRAPPC3-209ENST00000616395 TRBV27A0A0K0K1C4 114 aa12.03□□□□□ -0.48
TRAPPC3-209ENST00000616395 EREGO14944 169 aa12.03□□□□□ -0.48
TRAPPC3-209ENST00000616395 GAS8-AS1O95177 125 aa12.03□□□□□ -0.48
TRAPPC3-209ENST00000616395 HAMPP81172 84 aa12.03□□□□□ -0.48
TRAPPC3-209ENST00000616395 RPL36AP83881 106 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-209ENST00000616395 RPL36ALQ969Q0 106 aaKnown RBP12.03□□□□□ -0.48
TRAPPC3-209ENST00000616395 C3orf79P0CE67 100 aa12.02□□□□□ -0.49
TRAPPC3-209ENST00000616395 POLR2KP53803 58 aaKnown RBP12.02□□□□□ -0.49
TRAPPC3-209ENST00000616395 RHOHQ15669 191 aa12.02□□□□□ -0.49
TRAPPC3-209ENST00000616395 ESRGQ1W209 222 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms