RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 RNASEKQ6P5S7 137 aaKnown RBP7.66□□□□□ -1.18
MMP28-206ENST00000616383 Q8N8P6 123 aa7.66□□□□□ -1.18
MMP28-206ENST00000616383 PRSS3P2Q8NHM4 247 aa7.66□□□□□ -1.18
MMP28-206ENST00000616383 URB1-AS1Q96HZ7 61 aa7.66□□□□□ -1.18
MMP28-206ENST00000616383 IGLV2-18A0A075B6J9 118 aa7.65□□□□□ -1.18
MMP28-206ENST00000616383 IGHV3-38A0A0C4DH36 116 aa7.65□□□□□ -1.18
MMP28-206ENST00000616383 PRSS47A8MTI9 375 aa7.65□□□□□ -1.18
MMP28-206ENST00000616383 SERF1AO75920 110 aa7.65□□□□□ -1.18
MMP28-206ENST00000616383 LINC00310P59036 64 aa7.65□□□□□ -1.18
MMP28-206ENST00000616383 FA2HQ7L5A8 372 aa7.65□□□□□ -1.18
MMP28-206ENST00000616383 PHLDA1Q8WV24 401 aaPredicted RBP7.65□□□□□ -1.18
MMP28-206ENST00000616383 NXT2Q9NPJ8 142 aaKnown RBP7.65□□□□□ -1.18
MMP28-206ENST00000616383 TRBV27A0A0K0K1C4 114 aa7.64□□□□□ -1.19
MMP28-206ENST00000616383 VCYO14598 125 aa7.64□□□□□ -1.19
MMP28-206ENST00000616383 KRTAP19-4Q3LI73 84 aa7.64□□□□□ -1.19
MMP28-206ENST00000616383 NIT1Q86X76 327 aa7.64□□□□□ -1.19
MMP28-206ENST00000616383 DEFB104AQ8WTQ1 72 aa7.64□□□□□ -1.19
MMP28-206ENST00000616383 ICOSQ9Y6W8 199 aa7.64□□□□□ -1.19
MMP28-206ENST00000616383 H3BNG1 76 aa7.63□□□□□ -1.19
MMP28-206ENST00000616383 I3L3M4 83 aa7.63□□□□□ -1.19
MMP28-206ENST00000616383 TCAPO15273 167 aa7.63□□□□□ -1.19
MMP28-206ENST00000616383 TSHBP01222 138 aa7.63□□□□□ -1.19
MMP28-206ENST00000616383 S100A6P06703 90 aa7.63□□□□□ -1.19
MMP28-206ENST00000616383 COA6Q5JTJ3 125 aaKnown RBP7.63□□□□□ -1.19
MMP28-206ENST00000616383 AP5S1Q9NUS5 200 aa7.63□□□□□ -1.19
MMP28-206ENST00000616383 A0A096LPF7 62 aa7.62□□□□□ -1.19
MMP28-206ENST00000616383 LINC01546A6NGU7 62 aa7.62□□□□□ -1.19
MMP28-206ENST00000616383 NUPR1O60356 82 aa7.62□□□□□ -1.19
MMP28-206ENST00000616383 LINC00614P0C842 121 aa7.62□□□□□ -1.19
MMP28-206ENST00000616383 FCER1GP30273 86 aa7.62□□□□□ -1.19
MMP28-206ENST00000616383 COTL1Q14019 142 aa7.62□□□□□ -1.19
MMP28-206ENST00000616383 MRPL23Q16540 153 aaKnown RBP7.62□□□□□ -1.19
MMP28-206ENST00000616383 DAZ4Q86SG3 579 aaKnown RBP7.62□□□□□ -1.19
MMP28-206ENST00000616383 ATP6V0E2Q8NHE4 81 aa7.62□□□□□ -1.19
MMP28-206ENST00000616383 CHCHD1Q96BP2 118 aaKnown RBP7.62□□□□□ -1.19
MMP28-206ENST00000616383 KIR2DL4Q99706 377 aa7.62□□□□□ -1.19
MMP28-206ENST00000616383 DAZ3Q9NR90 486 aaKnown RBP7.62□□□□□ -1.19
MMP28-206ENST00000616383 DYNC2H1Q8NCM8 4307 aaKnown RBP7.62□□□□□ -1.19
MMP28-206ENST00000616383 DNAH7Q8WXX0 4024 aa7.62□□□□□ -1.19
MMP28-206ENST00000616383 HSBP1O75506 76 aa7.61□□□□□ -1.19
MMP28-206ENST00000616383 NUDT3O95989 172 aa7.61□□□□□ -1.19
MMP28-206ENST00000616383 LAGE3Q14657 143 aa7.61□□□□□ -1.19
MMP28-206ENST00000616383 TENM2Q9NT68 2774 aa7.61□□□□□ -1.19
MMP28-206ENST00000616383 K7EMI3 77 aa7.6□□□□□ -1.19
MMP28-206ENST00000616383 ESDP10768 282 aa7.6□□□□□ -1.19
MMP28-206ENST00000616383 SNRPEP62304 92 aaKnown RBP7.6□□□□□ -1.19
MMP28-206ENST00000616383 PMCHL1Q16048 86 aa7.6□□□□□ -1.19
MMP28-206ENST00000616383 ORMDL2Q53FV1 153 aa7.6□□□□□ -1.19
MMP28-206ENST00000616383 PDZD11Q5EBL8 140 aa7.6□□□□□ -1.19
MMP28-206ENST00000616383 IGHV1-24A0A0C4DH33 117 aa7.59□□□□□ -1.19
MMP28-206ENST00000616383 IGLL5B9A064 214 aa7.59□□□□□ -1.19
MMP28-206ENST00000616383 AMTP48728 403 aa7.59□□□□□ -1.19
MMP28-206ENST00000616383 NTM-AS1Q6ZSK4 140 aa7.59□□□□□ -1.19
MMP28-206ENST00000616383 SH2D6Q7Z4S9 175 aa7.59□□□□□ -1.19
MMP28-206ENST00000616383 FAM19A2Q8N3H0 131 aa7.59□□□□□ -1.19
MMP28-206ENST00000616383 C15orf53Q8NAA6 179 aa7.59□□□□□ -1.19
MMP28-206ENST00000616383 GTSF1LQ9H1H1 148 aa7.59□□□□□ -1.19
MMP28-206ENST00000616383 A0A096LNJ9 63 aa7.58□□□□□ -1.2
MMP28-206ENST00000616383 NUPR2A6NF83 97 aa7.58□□□□□ -1.2
MMP28-206ENST00000616383 C5orf52A6NGY3 159 aa7.58□□□□□ -1.2
MMP28-206ENST00000616383 HBDP02042 147 aa7.58□□□□□ -1.2
MMP28-206ENST00000616383 TMEM97Q5BJF2 176 aa7.58□□□□□ -1.2
MMP28-206ENST00000616383 CEMP1Q6PRD7 247 aaPredicted RBP7.58□□□□□ -1.2
MMP28-206ENST00000616383 HIST3H2BBQ8N257 126 aa7.58□□□□□ -1.2
MMP28-206ENST00000616383 CHCHD7Q9BUK0 85 aa7.58□□□□□ -1.2
MMP28-206ENST00000616383 TRBV25-1A0A075B6N4 114 aa7.57□□□□□ -1.2
MMP28-206ENST00000616383 TRBV6-8A0A0A6YYG3 113 aa7.57□□□□□ -1.2
MMP28-206ENST00000616383 BTF3P20290 206 aaKnown RBP7.57□□□□□ -1.2
MMP28-206ENST00000616383 C20orf203Q8NBC4 194 aa7.57□□□□□ -1.2
MMP28-206ENST00000616383 KRTAP4-5Q9BYR2 181 aa7.57□□□□□ -1.2
MMP28-206ENST00000616383 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.56□□□□□ -1.2
MMP28-206ENST00000616383 IGKV2-29A2NJV5 120 aaPredicted RBP7.56□□□□□ -1.2
MMP28-206ENST00000616383 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
MMP28-206ENST00000616383 S100A2P29034 98 aa7.56□□□□□ -1.2
MMP28-206ENST00000616383 TIRAPP58753 221 aa7.56□□□□□ -1.2
MMP28-206ENST00000616383 RPL39P62891 51 aaKnown RBP7.56□□□□□ -1.2
MMP28-206ENST00000616383 C2orf66Q6UXQ4 117 aa7.56□□□□□ -1.2
MMP28-206ENST00000616383 WWC2-AS2Q96NR7 200 aa7.56□□□□□ -1.2
MMP28-206ENST00000616383 TMEM243Q9BU79 118 aa7.56□□□□□ -1.2
MMP28-206ENST00000616383 CYSLTR1Q9Y271 337 aa7.56□□□□□ -1.2
MMP28-206ENST00000616383 KLK5Q9Y337 293 aaPredicted RBP7.56□□□□□ -1.2
MMP28-206ENST00000616383 CSMD3Q7Z407 3707 aa7.55□□□□□ -1.2
MMP28-206ENST00000616383 ZFAND6Q6FIF0 208 aa7.55□□□□□ -1.2
MMP28-206ENST00000616383 LYPD5Q6UWN5 251 aa7.55□□□□□ -1.2
MMP28-206ENST00000616383 MUC7Q8TAX7 377 aa7.55□□□□□ -1.2
MMP28-206ENST00000616383 TOMM6Q96B49 74 aa7.55□□□□□ -1.2
MMP28-206ENST00000616383 CHCHD5Q9BSY4 110 aa7.55□□□□□ -1.2
MMP28-206ENST00000616383 IFITM10A6NMD0 228 aa7.54□□□□□ -1.2
MMP28-206ENST00000616383 UBE2L6O14933 153 aa7.54□□□□□ -1.2
MMP28-206ENST00000616383 G0S2P27469 103 aa7.54□□□□□ -1.2
MMP28-206ENST00000616383 ESRGQ1W209 222 aa7.54□□□□□ -1.2
MMP28-206ENST00000616383 LELP1Q5T871 98 aa7.54□□□□□ -1.2
MMP28-206ENST00000616383 LINC00173Q6ZV60 143 aa7.54□□□□□ -1.2
MMP28-206ENST00000616383 TMEM18Q96B42 140 aa7.54□□□□□ -1.2
MMP28-206ENST00000616383 HIST1H2BLQ99880 126 aa7.54□□□□□ -1.2
MMP28-206ENST00000616383 APLNQ9ULZ1 77 aa7.54□□□□□ -1.2
MMP28-206ENST00000616383 KMT2CQ8NEZ4 4911 aaKnown RBP7.53□□□□□ -1.2
MMP28-206ENST00000616383 LEPROTL1O95214 131 aa7.53□□□□□ -1.2
MMP28-206ENST00000616383 FABP4P15090 132 aa7.53□□□□□ -1.2
MMP28-206ENST00000616383 GAGE6Q13070 117 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms