RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 TIMM21Q9BVV7 248 aa8.18□□□□□ -1.1
CDH4-202ENST00000611855 LENEPQ9Y5L5 61 aa8.18□□□□□ -1.1
CDH4-202ENST00000611855 ADORA2A-AS1P86434 159 aa8.18□□□□□ -1.1
CDH4-202ENST00000611855 I3L3M4 83 aa8.18□□□□□ -1.1
CDH4-202ENST00000611855 PRM2P04554 102 aa8.17□□□□□ -1.1
CDH4-202ENST00000611855 BLCAPP62952 87 aa8.17□□□□□ -1.1
CDH4-202ENST00000611855 HERVK_113P63121 156 aa8.17□□□□□ -1.1
CDH4-202ENST00000611855 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
CDH4-202ENST00000611855 NDUFA12Q9UI09 145 aa8.17□□□□□ -1.1
CDH4-202ENST00000611855 ZANQ9Y493 2812 aa8.17□□□□□ -1.1
CDH4-202ENST00000611855 H3BT86 120 aa8.16□□□□□ -1.1
CDH4-202ENST00000611855 EDA2RQ9HAV5 297 aa8.16□□□□□ -1.1
CDH4-202ENST00000611855 FAM208BQ5VWN6 2430 aa8.16□□□□□ -1.1
CDH4-202ENST00000611855 CD28P10747 220 aa8.16□□□□□ -1.1
CDH4-202ENST00000611855 CSDC2Q9Y534 153 aaKnown RBP8.16□□□□□ -1.1
CDH4-202ENST00000611855 IGSF10Q6WRI0 2623 aa8.16□□□□□ -1.1
CDH4-202ENST00000611855 MYO9AB2RTY4 2548 aa8.16□□□□□ -1.1
CDH4-202ENST00000611855 SPINK13Q1W4C9 94 aa8.16□□□□□ -1.1
CDH4-202ENST00000611855 POLQO75417 2590 aa8.15□□□□□ -1.1
CDH4-202ENST00000611855 IGHV4OR15-8A0A075B7B6 117 aa8.15□□□□□ -1.1
CDH4-202ENST00000611855 A0A087WW49 117 aa8.15□□□□□ -1.1
CDH4-202ENST00000611855 MOB4Q9Y3A3 225 aa8.15□□□□□ -1.1
CDH4-202ENST00000611855 NDUFA4O00483 81 aa8.15□□□□□ -1.1
CDH4-202ENST00000611855 PROK1P58294 105 aa8.15□□□□□ -1.1
CDH4-202ENST00000611855 UTP20O75691 2785 aaKnown RBP8.14□□□□□ -1.11
CDH4-202ENST00000611855 KNCNA6PVL3 124 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 NDUFA7O95182 113 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 FAM19A4Q96LR4 140 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 SPANXA1Q9NS26 97 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 Q9UF83 564 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 FAM223BA6NKX1 122 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 LST1O00453 97 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 FAM223AQ8IWN6 122 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 SETD2Q9BYW2 2564 aaPredicted RBP8.14□□□□□ -1.11
CDH4-202ENST00000611855 TRBV27A0A0K0K1C4 114 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 M0QY20 66 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 LMO4P61968 165 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 KLRB1Q12918 225 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 C3orf22Q8N5N4 141 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 LRRK2Q5S007 2527 aa8.14□□□□□ -1.11
CDH4-202ENST00000611855 WNK1Q9H4A3 2382 aa8.13□□□□□ -1.11
CDH4-202ENST00000611855 IGLV4-3A0A075B6K6 122 aa8.13□□□□□ -1.11
CDH4-202ENST00000611855 SMCR5Q8TEV8 140 aa8.13□□□□□ -1.11
CDH4-202ENST00000611855 H3BUX3 64 aa8.13□□□□□ -1.11
CDH4-202ENST00000611855 IGHV4-38-2P0DP08 117 aa8.13□□□□□ -1.11
CDH4-202ENST00000611855 C10orf99Q6UWK7 81 aa8.13□□□□□ -1.11
CDH4-202ENST00000611855 NRGNQ92686 78 aa8.13□□□□□ -1.11
CDH4-202ENST00000611855 TRBV7-7A0A0K0K1E9 115 aa8.13□□□□□ -1.11
CDH4-202ENST00000611855 KLLNB2CW77 178 aa8.13□□□□□ -1.11
CDH4-202ENST00000611855 RHOHQ15669 191 aa8.13□□□□□ -1.11
CDH4-202ENST00000611855 NXPH4O95158 308 aa8.12□□□□□ -1.11
CDH4-202ENST00000611855 MED14OSP0DP75 135 aa8.12□□□□□ -1.11
CDH4-202ENST00000611855 FAM19A5Q7Z5A7 132 aaPredicted RBP8.12□□□□□ -1.11
CDH4-202ENST00000611855 C20orf203Q8NBC4 194 aa8.12□□□□□ -1.11
CDH4-202ENST00000611855 DNAJC30Q96LL9 226 aa8.12□□□□□ -1.11
CDH4-202ENST00000611855 USP24Q9UPU5 2620 aa8.12□□□□□ -1.11
CDH4-202ENST00000611855 LITAFQ99732 161 aa8.12□□□□□ -1.11
CDH4-202ENST00000611855 DAZ1Q9NQZ3 744 aaKnown RBP8.12□□□□□ -1.11
CDH4-202ENST00000611855 USP9XQ93008 2570 aaPredicted RBP8.12□□□□□ -1.11
CDH4-202ENST00000611855 IGHV3-16A0A0C4DH30 117 aa8.11□□□□□ -1.11
CDH4-202ENST00000611855 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
CDH4-202ENST00000611855 hADV29S1A0JD25 119 aa8.11□□□□□ -1.11
CDH4-202ENST00000611855 FBXL19-AS1Q494R0 122 aa8.11□□□□□ -1.11
CDH4-202ENST00000611855 POM121L12Q8N7R1 296 aa8.11□□□□□ -1.11
CDH4-202ENST00000611855 TLN2Q9Y4G6 2542 aa8.11□□□□□ -1.11
CDH4-202ENST00000611855 ZNF462Q96JM2 2506 aa8.11□□□□□ -1.11
CDH4-202ENST00000611855 TMEM61Q8N0U2 210 aa8.11□□□□□ -1.11
CDH4-202ENST00000611855 TRAV13-1A0A0B4J241 112 aa8.1□□□□□ -1.11
CDH4-202ENST00000611855 FAM240AA0A1B0GVK7 77 aa8.1□□□□□ -1.11
CDH4-202ENST00000611855 K7ENP7 123 aa8.1□□□□□ -1.11
CDH4-202ENST00000611855 IGHV1-69P01742 117 aa8.1□□□□□ -1.11
CDH4-202ENST00000611855 MIAQ16674 131 aa8.1□□□□□ -1.11
CDH4-202ENST00000611855 IGHV3-38A0A0C4DH36 116 aa8.1□□□□□ -1.11
CDH4-202ENST00000611855 UQCRQO14949 82 aa8.1□□□□□ -1.11
CDH4-202ENST00000611855 DAZ2Q13117 558 aaKnown RBP8.1□□□□□ -1.11
CDH4-202ENST00000611855 LY6DQ14210 128 aa8.1□□□□□ -1.11
CDH4-202ENST00000611855 KLK9Q2XQG4 91 aa8.1□□□□□ -1.11
CDH4-202ENST00000611855 C19orf54Q5BKX5 351 aa8.1□□□□□ -1.11
CDH4-202ENST00000611855 DAZ4Q86SG3 579 aaKnown RBP8.1□□□□□ -1.11
CDH4-202ENST00000611855 DAZ3Q9NR90 486 aaKnown RBP8.1□□□□□ -1.11
CDH4-202ENST00000611855 SMIM9A6NGZ8 99 aa8.09□□□□□ -1.11
CDH4-202ENST00000611855 NSUN5P1Q3KNT7 163 aa8.09□□□□□ -1.11
CDH4-202ENST00000611855 APRG1Q8IVJ8 170 aa8.09□□□□□ -1.11
CDH4-202ENST00000611855 DCANP1Q8TF63 244 aa8.09□□□□□ -1.11
CDH4-202ENST00000611855 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.09□□□□□ -1.11
CDH4-202ENST00000611855 IGKV2-29A2NJV5 120 aaPredicted RBP8.09□□□□□ -1.11
CDH4-202ENST00000611855 J3KT08 172 aa8.09□□□□□ -1.11
CDH4-202ENST00000611855 HOXD3P31249 432 aaPredicted RBP8.09□□□□□ -1.11
CDH4-202ENST00000611855 C5orf47Q569G3 176 aa8.09□□□□□ -1.11
CDH4-202ENST00000611855 IGHV1-58A0A0C4DH39 117 aa8.08□□□□□ -1.12
CDH4-202ENST00000611855 JMJD1CQ15652 2540 aa8.08□□□□□ -1.12
CDH4-202ENST00000611855 LINC00643Q86TS7 51 aa8.08□□□□□ -1.12
CDH4-202ENST00000611855 TRBV6-5A0A0K0K1A5 114 aa8.08□□□□□ -1.12
CDH4-202ENST00000611855 BAALC-AS2P0C853 105 aa8.08□□□□□ -1.12
CDH4-202ENST00000611855 C9orf85Q96MD7 179 aa8.08□□□□□ -1.12
CDH4-202ENST00000611855 Q9HAA7 133 aa8.08□□□□□ -1.12
CDH4-202ENST00000611855 PTPN13Q12923 2485 aa8.08□□□□□ -1.12
CDH4-202ENST00000611855 IGHV1OR15-1A0A075B7D0 117 aa8.07□□□□□ -1.12
CDH4-202ENST00000611855 SDIM1Q6ZPB5 146 aa8.07□□□□□ -1.12
CDH4-202ENST00000611855 IGKV3D-7A0A0C4DH55 119 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms