RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SYT8Q8NBV8 401 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 PHLDA1Q8WV24 401 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-217ENST00000611848 TOMM6Q96B49 74 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 TP73-AS1Q9UF72 201 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 CELA1Q9UNI1 258 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 HHLA3Q9XRX5 114 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 TRGV11A0A075B6L2 103 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 TRBV6-5A0A0K0K1A5 114 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 LYRM9A8MSI8 78 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 NUDT3O95989 172 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 PRSS1P07477 247 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 C12orf74Q32Q52 190 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 FAM222AQ5U5X8 452 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 SUMO4Q6EEV6 95 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 CEMP1Q6PRD7 247 aaPredicted RBP6.28□□□□□ -1.4
SMAD4-217ENST00000611848 C2orf91Q6ZV80 131 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 BOD1L2Q8IYS8 172 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 RNASE8Q8TDE3 154 aaKnown RBP6.28□□□□□ -1.4
SMAD4-217ENST00000611848 JPT2Q9H910 190 aa6.28□□□□□ -1.4
SMAD4-217ENST00000611848 TRAV10A0A0B4J240 114 aa6.27□□□□□ -1.41
SMAD4-217ENST00000611848 TRAV12-1A0A0B4J245 112 aa6.27□□□□□ -1.41
SMAD4-217ENST00000611848 IGKCP01834 107 aa6.27□□□□□ -1.41
SMAD4-217ENST00000611848 POLR2KP53803 58 aaKnown RBP6.27□□□□□ -1.41
SMAD4-217ENST00000611848 KLK5Q9Y337 293 aaPredicted RBP6.27□□□□□ -1.41
SMAD4-217ENST00000611848 TENM2Q9NT68 2774 aa6.27□□□□□ -1.41
SMAD4-217ENST00000611848 A0A087WX48 190 aa6.26□□□□□ -1.41
SMAD4-217ENST00000611848 PLAC8L1A1L4L8 177 aa6.26□□□□□ -1.41
SMAD4-217ENST00000611848 CBY3A6NI87 242 aa6.26□□□□□ -1.41
SMAD4-217ENST00000611848 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.26□□□□□ -1.41
SMAD4-217ENST00000611848 SIVA1O15304 175 aa6.26□□□□□ -1.41
SMAD4-217ENST00000611848 DPM2O94777 84 aa6.26□□□□□ -1.41
SMAD4-217ENST00000611848 CRYGDP07320 174 aa6.26□□□□□ -1.41
SMAD4-217ENST00000611848 GAGE1Q13065 139 aa6.26□□□□□ -1.41
SMAD4-217ENST00000611848 MPV17L2Q567V2 206 aa6.26□□□□□ -1.41
SMAD4-217ENST00000611848 BVES-AS1Q5T3Y7 98 aa6.26□□□□□ -1.41
SMAD4-217ENST00000611848 Q6ZTC4 211 aa6.26□□□□□ -1.41
SMAD4-217ENST00000611848 A0A087WWL8 130 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 LINC01549A6NIU2 74 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 M0QY20 66 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 VCYO14598 125 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 G0S2P27469 103 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 DAD1P61803 113 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 PIK3CD-AS1Q5SR53 167 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 PTH2Q96A98 100 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 SCGB3A1Q96QR1 104 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 NOP10Q9NPE3 64 aaKnown RBP6.25□□□□□ -1.41
SMAD4-217ENST00000611848 TRBV27A0A0K0K1C4 114 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 ZNF25P17030 456 aaPredicted RBP6.25□□□□□ -1.41
SMAD4-217ENST00000611848 DAZ2Q13117 558 aaKnown RBP6.25□□□□□ -1.41
SMAD4-217ENST00000611848 C2orf66Q6UXQ4 117 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 ERASQ7Z444 233 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 C11orf72Q8NBR9 251 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 NEXN-AS1Q8NBZ9 246 aa6.25□□□□□ -1.41
SMAD4-217ENST00000611848 MRPL35Q9NZE8 188 aaKnown RBP6.25□□□□□ -1.41
SMAD4-217ENST00000611848 MUC4Q99102 2169 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 DEFB131BA0A096LNP1 70 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 F5H697 171 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 H7C1H1 209 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 DEFB130BP0DP73 79 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 DEFB130AP0DP74 79 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 PLNP26678 52 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 TCTAP57738 103 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 ZNF876PQ49A33 203 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 LINC00612Q8N6U2 182 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 ORAOV1Q8WV07 137 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 LYSTQ99698 3801 aa6.24□□□□□ -1.41
SMAD4-217ENST00000611848 SDHAF1A6NFY7 115 aa6.23□□□□□ -1.41
SMAD4-217ENST00000611848 F8VRH5 84 aa6.23□□□□□ -1.41
SMAD4-217ENST00000611848 ZNF415Q09FC8 603 aa6.23□□□□□ -1.41
SMAD4-217ENST00000611848 ZFP2Q6ZN57 461 aa6.23□□□□□ -1.41
SMAD4-217ENST00000611848 PCP2Q8IVA1 136 aa6.23□□□□□ -1.41
SMAD4-217ENST00000611848 BAALCQ8WXS3 180 aa6.23□□□□□ -1.41
SMAD4-217ENST00000611848 KIR2DL4Q99706 377 aa6.23□□□□□ -1.41
SMAD4-217ENST00000611848 CYSLTR1Q9Y271 337 aa6.23□□□□□ -1.41
SMAD4-217ENST00000611848 COX11Q9Y6N1 276 aa6.23□□□□□ -1.41
SMAD4-217ENST00000611848 IGKV2D-26A0A0A0MRZ7 120 aa6.22□□□□□ -1.41
SMAD4-217ENST00000611848 IGIPA6NJ69 53 aa6.22□□□□□ -1.41
SMAD4-217ENST00000611848 ATP5G1P05496 136 aa6.22□□□□□ -1.41
SMAD4-217ENST00000611848 NMUP48645 174 aa6.22□□□□□ -1.41
SMAD4-217ENST00000611848 TMEM97Q5BJF2 176 aa6.22□□□□□ -1.41
SMAD4-217ENST00000611848 ZC2HC1BQ5TFG8 222 aa6.22□□□□□ -1.41
SMAD4-217ENST00000611848 FAM74A4Q5TZK3 123 aa6.22□□□□□ -1.41
SMAD4-217ENST00000611848 UFSP1Q6NVU6 142 aa6.22□□□□□ -1.41
SMAD4-217ENST00000611848 NEGR1Q7Z3B1 354 aa6.22□□□□□ -1.41
SMAD4-217ENST00000611848 SPXQ9BT56 116 aa6.22□□□□□ -1.41
SMAD4-217ENST00000611848 CHTOPQ9Y3Y2 248 aaKnown RBP6.22□□□□□ -1.41
SMAD4-217ENST00000611848 KMT2CQ8NEZ4 4911 aaKnown RBP6.22□□□□□ -1.41
SMAD4-217ENST00000611848 SACSQ9NZJ4 4579 aa6.22□□□□□ -1.41
SMAD4-217ENST00000611848 IGLL5B9A064 214 aa6.21□□□□□ -1.41
SMAD4-217ENST00000611848 M0R2P5 195 aa6.21□□□□□ -1.41
SMAD4-217ENST00000611848 HSD52Q0P140 79 aa6.21□□□□□ -1.41
SMAD4-217ENST00000611848 ZNF56Q15929 161 aa6.21□□□□□ -1.41
SMAD4-217ENST00000611848 TMEM141Q96I45 108 aa6.21□□□□□ -1.41
SMAD4-217ENST00000611848 TIMM17AQ99595 171 aa6.21□□□□□ -1.41
SMAD4-217ENST00000611848 HIGD1BQ9P298 99 aa6.21□□□□□ -1.41
SMAD4-217ENST00000611848 NACAE9PAV3 2078 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 TRGV1A0A0A0MS02 117 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 GAGE12BA1L429 117 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 PRSS29PA6NIE9 313 aa6.21□□□□□ -1.42
SMAD4-217ENST00000611848 A8MWV9 139 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms