RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 MRPS12O15235 138 aaKnown RBP3.84□□□□□ -1.79
SSX9-202ENST00000608568 SPRY3O43610 288 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 IGHV3-13P01766 116 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 PLA2G1BP04054 148 aaKnown RBP3.84□□□□□ -1.79
SSX9-202ENST00000608568 ELANEP08246 267 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 INAFM2P0DMQ5 153 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 LINC00205P59089 165 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 MRPS36P82909 103 aaKnown RBP3.84□□□□□ -1.79
SSX9-202ENST00000608568 C17orf58Q2M2W7 97 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 ASPHD1Q5U4P2 390 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 LINC00311Q8N616 119 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 SERP2Q8N6R1 65 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 NRACQ8N912 160 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 KLF14Q8TD94 323 aaPredicted RBP3.84□□□□□ -1.79
SSX9-202ENST00000608568 PLEKHB2Q96CS7 222 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 C2orf48Q96LS8 159 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 EDA2RQ9HAV5 297 aa3.84□□□□□ -1.79
SSX9-202ENST00000608568 RPUSD1Q9UJJ7 312 aaKnown RBP3.84□□□□□ -1.79
SSX9-202ENST00000608568 KMT2CQ8NEZ4 4911 aaKnown RBP3.84□□□□□ -1.79
SSX9-202ENST00000608568 DNAH7Q8WXX0 4024 aa3.84□□□□□ -1.8
SSX9-202ENST00000608568 IGHV3OR16-10A0A075B7F0 116 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 A8MZ25 164 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 LST1O00453 97 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 BCE1O60756 84 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 MED14OSP0DP75 135 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 LGALS3P17931 250 aaKnown RBP3.83□□□□□ -1.8
SSX9-202ENST00000608568 HILS1P60008 231 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 WT1-ASQ06250 92 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 ZNF415Q09FC8 603 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 MLANAQ16655 118 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 FAM222AQ5U5X8 452 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 CD177Q8N6Q3 437 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 FAM216BQ8N7L0 139 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 DEFB108BQ8NET1 73 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 TIMM17AQ99595 171 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 LINC00527Q9UJ94 153 aa3.83□□□□□ -1.8
SSX9-202ENST00000608568 NBEAL2Q6ZNJ1 2754 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 AGRNO00468 2067 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 TRAV13-1A0A0B4J241 112 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 A0A0J9YXY3 114 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 TMEM223A0PJW6 202 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 DNAJC9-AS1A6NH13 148 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 SMKR1H3BMG3 65 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 H7C423 109 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 LEPROTO15243 131 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 RS1O15537 224 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 PAX4O43316 350 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 IGHV4-38-2P0DP08 117 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 EGR2P11161 476 aaPredicted RBP3.82□□□□□ -1.8
SSX9-202ENST00000608568 DLX1P56177 255 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 FXYD7P58549 80 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 RPL18AQ02543 176 aaKnown RBP3.82□□□□□ -1.8
SSX9-202ENST00000608568 EXOC3-AS1Q8N2X6 119 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 RNF5Q99942 180 aa3.82□□□□□ -1.8
SSX9-202ENST00000608568 RYR3Q15413 4870 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 IGKV1D-17A0A075B6S4 117 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 TMEM89A2RUT3 159 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 CGB1A6NKQ9 187 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 LINC01548A6NM66 108 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 EPM2AB3EWF7 344 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 J3QQQ9 107 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 TIMM8AO60220 97 aaPredicted RBP3.81□□□□□ -1.8
SSX9-202ENST00000608568 TIMM17BO60830 172 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 LHBP01229 141 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 IGHV1-69P01742 117 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 IGKV1-16P04430 117 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 RPL27AP46776 148 aaKnown RBP3.81□□□□□ -1.8
SSX9-202ENST00000608568 CRIP2P52943 208 aaPredicted RBP3.81□□□□□ -1.8
SSX9-202ENST00000608568 LYZP61626 148 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 SUMO2P61956 95 aaKnown RBP3.81□□□□□ -1.8
SSX9-202ENST00000608568 Q1RN00 199 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 Q5XG85 94 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 RUSC1-AS1Q66K80 236 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 FAM53AQ6NSI3 398 aaPredicted RBP3.81□□□□□ -1.8
SSX9-202ENST00000608568 DUX4L9Q6RFH8 374 aaPredicted RBP3.81□□□□□ -1.8
SSX9-202ENST00000608568 LYPD2Q6UXB3 125 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 C2orf66Q6UXQ4 117 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 DCANP1Q8TF63 244 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 CCL17Q92583 94 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 MRPL53Q96EL3 112 aaKnown RBP3.81□□□□□ -1.8
SSX9-202ENST00000608568 C8orf49Q96NF6 230 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 OVOL2Q9BRP0 275 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 JPT2Q9H910 190 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 LENEPQ9Y5L5 61 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 ICOSQ9Y6W8 199 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 V9GYY9 64 aa3.81□□□□□ -1.8
SSX9-202ENST00000608568 DYNC2H1Q8NCM8 4307 aaKnown RBP3.81□□□□□ -1.8
SSX9-202ENST00000608568 HUWE1Q7Z6Z7 4374 aaKnown RBP3.8□□□□□ -1.8
SSX9-202ENST00000608568 TRAV12-2A0A075B6T6 113 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 TINCRA0A1B0GVN0 87 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 M0R3E3 92 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 SPRY2O43597 315 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 IGLV2-23P01705 113 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 TFF1P04155 84 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 ATP5EP56381 51 aaPredicted RBP3.8□□□□□ -1.8
SSX9-202ENST00000608568 KRTAP10-3P60369 221 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 NPC2P61916 151 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 PRB3Q04118 309 aaPredicted RBP3.8□□□□□ -1.8
SSX9-202ENST00000608568 S100A7L2Q5SY68 101 aa3.8□□□□□ -1.8
SSX9-202ENST00000608568 ATP5EP2Q5VTU8 51 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms