RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 HIST2H2BCQ6DN03 193 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 HIST2H2BDQ6DRA6 164 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 FAM19A3Q7Z5A8 133 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 RNF152Q8N8N0 203 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 PRSS33Q8NF86 280 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 MBD3L2Q8NHZ7 208 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 FAM104AQ969W3 186 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 DSCR8Q96T75 97 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 V9GYY9 64 aa2.95□□□□□ -1.94
HMGB1P50-201ENST00000605814 ICE1Q9Y2F5 2266 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 TRAV7A0A075B6U4 112 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 IGHV3-72A0A0B4J1Y9 119 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 FAM236DA0A1B0GTK5 79 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 M0QY20 66 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 SPRY2O43597 315 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 FAM236CP0DP71 79 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 XCL1P47992 114 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 NANOS2P60321 138 aaKnown RBP2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 PIK3CD-AS1Q5SR53 167 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 IGFL2Q6UWQ7 119 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 C1orf158Q8N1D5 194 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 Q8N6K4 173 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 CNEP1R1Q8N9A8 125 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 LINC00308Q8TCZ7 52 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 DPM3Q9P2X0 92 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 XCL2Q9UBD3 114 aa2.94□□□□□ -1.94
HMGB1P50-201ENST00000605814 AHCTF1Q8WYP5 2266 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 TRAV13-2A0A0B4J235 113 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 IGLV5-39A0A0G2JS06 123 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 EPOPA6NHQ4 379 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 FAM223BA6NKX1 122 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 KNCNA6PVL3 124 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 KLLNB2CW77 178 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 H7BZZ5 65 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 M0R1B8 84 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 SOCS3O14543 225 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 CCKP06307 115 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 MGPP08493 103 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 APELAP0DMC3 54 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 RPL35AP18077 110 aaKnown RBP2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 CFHR3Q02985 330 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 PRR9Q5T870 116 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 C1orf195Q5TG92 126 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 LYPD2Q6UXB3 125 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 Q6ZTC4 211 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 VMO1Q7Z5L0 202 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 MAFAQ8NHW3 353 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 LINC00846Q9NV44 126 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 PLCE1Q9P212 2302 aa2.93□□□□□ -1.94
HMGB1P50-201ENST00000605814 RBMY1BA6NDE4 496 aaKnown RBP2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 RBMY1EA6NEQ0 496 aaKnown RBP2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 JMJD7-PLA2G4BH0Y9G9 81 aa2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 M0R1W7 72 aa2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 GNRH2O43555 120 aa2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 ERC2-IT1O76042 136 aa2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 RBMY1DP0C7P1 496 aaKnown RBP2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 RBMY1A1P0DJD3 496 aaKnown RBP2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 RBMY1CP0DJD4 496 aa2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 RBMY1FQ15415 496 aaKnown RBP2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 C6orf226Q5I0X4 101 aa2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 FP248Q71RG6 208 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 Q8N2B8 174 aa2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 C10orf105Q8TEF2 133 aa2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 LINC00167Q96N53 147 aa2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 TMEM243Q9BU79 118 aa2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 WNK2Q9Y3S1 2297 aa2.92□□□□□ -1.94
HMGB1P50-201ENST00000605814 IGHV7-81A0A0B4J1V7 117 aa2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 ODF3BA8MYP8 253 aa2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 IBA57-AS1B1ANH7 110 aa2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 DNAL4O96015 105 aa2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 MT3P25713 68 aa2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 MINOS1Q5TGZ0 78 aa2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 Q6ZSV7 163 aa2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 C18orf65Q6ZTR6 163 aa2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 RNASE6Q93091 150 aaKnown RBP2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 OPRPNQ99935 248 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 MINOS1-NBL1R4GNA1 71 aa2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 SDK1Q7Z5N4 2213 aa2.91□□□□□ -1.94
HMGB1P50-201ENST00000605814 IGHV3-16A0A0C4DH30 117 aa2.9□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGKV3D-7A0A0C4DH55 119 aa2.9□□□□□ -1.95
HMGB1P50-201ENST00000605814 IGF1P05019 195 aa2.9□□□□□ -1.95
HMGB1P50-201ENST00000605814 KHDC1LQ5JSQ8 128 aa2.9□□□□□ -1.95
HMGB1P50-201ENST00000605814 MPLKIPQ8TAP9 179 aa2.9□□□□□ -1.95
HMGB1P50-201ENST00000605814 ZNF625Q96I27 306 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P50-201ENST00000605814 FAM218AQ96MZ4 157 aa2.9□□□□□ -1.95
HMGB1P50-201ENST00000605814 TRANK1O15050 2925 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 ABCA4P78363 2273 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 TRBV7-6A0A0J9YX20 115 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 H3BQ85 93 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 K7EMT4 169 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 NDUFA4O00483 81 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 TRBV12-3P01733 135 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 PRB4P10163 310 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 CD28P10747 220 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 NDPQ00604 133 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 C15orf32Q32M92 178 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 SOSTDC1Q6X4U4 206 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 Q6ZRU5 148 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 FAM223AQ8IWN6 122 aa2.89□□□□□ -1.95
HMGB1P50-201ENST00000605814 C20orf197Q8N268 126 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms