RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 DAZ3Q9NR90 486 aaKnown RBP7.15□□□□□ -1.26
LIG1-210ENST00000596332 TNFRSF18Q9Y5U5 241 aa7.15□□□□□ -1.26
LIG1-210ENST00000596332 FAT2Q9NYQ8 4349 aa7.15□□□□□ -1.27
LIG1-210ENST00000596332 FRAS1Q86XX4 4008 aa7.14□□□□□ -1.27
LIG1-210ENST00000596332 TRBV27A0A0K0K1C4 114 aa7.14□□□□□ -1.27
LIG1-210ENST00000596332 SDHAF1A6NFY7 115 aa7.14□□□□□ -1.27
LIG1-210ENST00000596332 PRSS47A8MTI9 375 aa7.14□□□□□ -1.27
LIG1-210ENST00000596332 NPYP01303 97 aa7.14□□□□□ -1.27
LIG1-210ENST00000596332 IQCJQ1A5X6 159 aa7.14□□□□□ -1.27
LIG1-210ENST00000596332 NIT1Q86X76 327 aa7.14□□□□□ -1.27
LIG1-210ENST00000596332 D6R8Y8 96 aa7.13□□□□□ -1.27
LIG1-210ENST00000596332 RTL8CO15255 209 aa7.13□□□□□ -1.27
LIG1-210ENST00000596332 TNFRSF6BO95407 300 aa7.13□□□□□ -1.27
LIG1-210ENST00000596332 TSHBP01222 138 aa7.13□□□□□ -1.27
LIG1-210ENST00000596332 S100A2P29034 98 aa7.13□□□□□ -1.27
LIG1-210ENST00000596332 LINC01556Q5JQF7 62 aa7.13□□□□□ -1.27
LIG1-210ENST00000596332 OR10J3Q5JRS4 329 aa7.13□□□□□ -1.27
LIG1-210ENST00000596332 KCNIP4Q6PIL6 250 aa7.13□□□□□ -1.27
LIG1-210ENST00000596332 Q6ZRN7 208 aaPredicted RBP7.13□□□□□ -1.27
LIG1-210ENST00000596332 CHCHD7Q9BUK0 85 aa7.13□□□□□ -1.27
LIG1-210ENST00000596332 GNB1LQ9BYB4 327 aa7.13□□□□□ -1.27
LIG1-210ENST00000596332 ESDP10768 282 aa7.12□□□□□ -1.27
LIG1-210ENST00000596332 CKS2P33552 79 aa7.12□□□□□ -1.27
LIG1-210ENST00000596332 RPL32P62910 135 aaKnown RBP7.12□□□□□ -1.27
LIG1-210ENST00000596332 SUMO2P61956 95 aaKnown RBP7.11□□□□□ -1.27
LIG1-210ENST00000596332 KIAA1644Q3SXP7 199 aa7.11□□□□□ -1.27
LIG1-210ENST00000596332 FAM104AQ969W3 186 aa7.11□□□□□ -1.27
LIG1-210ENST00000596332 C20orf78Q9BR46 151 aa7.11□□□□□ -1.27
LIG1-210ENST00000596332 ST20Q9HBF5 79 aa7.11□□□□□ -1.27
LIG1-210ENST00000596332 TRAV8-6A0A0B4J262 113 aa7.1□□□□□ -1.27
LIG1-210ENST00000596332 IBA57-AS1B1ANH7 110 aa7.1□□□□□ -1.27
LIG1-210ENST00000596332 I3L3M4 83 aa7.1□□□□□ -1.27
LIG1-210ENST00000596332 PHOX2AO14813 284 aa7.1□□□□□ -1.27
LIG1-210ENST00000596332 PPBPP02775 128 aa7.1□□□□□ -1.27
LIG1-210ENST00000596332 ORMDL3Q8N138 153 aa7.1□□□□□ -1.27
LIG1-210ENST00000596332 PRELID3AQ96N28 172 aa7.1□□□□□ -1.27
LIG1-210ENST00000596332 DNAH11Q96DT5 4516 aa7.1□□□□□ -1.27
LIG1-210ENST00000596332 IGHV1-24A0A0C4DH33 117 aa7.09□□□□□ -1.27
LIG1-210ENST00000596332 IGHV3-30P01768 117 aa7.09□□□□□ -1.27
LIG1-210ENST00000596332 IGHV3-33P01772 117 aa7.09□□□□□ -1.27
LIG1-210ENST00000596332 IGHV3-30-3P0DP02 117 aa7.09□□□□□ -1.27
LIG1-210ENST00000596332 IGHV3-30-5P0DP03 117 aa7.09□□□□□ -1.27
LIG1-210ENST00000596332 MPV17L2Q567V2 206 aa7.09□□□□□ -1.27
LIG1-210ENST00000596332 TMEM97Q5BJF2 176 aa7.09□□□□□ -1.27
LIG1-210ENST00000596332 Q8N976 141 aa7.09□□□□□ -1.27
LIG1-210ENST00000596332 ALKBH7Q9BT30 221 aaPredicted RBP7.09□□□□□ -1.27
LIG1-210ENST00000596332 PKD1P98161 4303 aa7.09□□□□□ -1.27
LIG1-210ENST00000596332 IGLV4-60A0A075B6I1 120 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 VCYO14598 125 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 PPP1R17O96001 155 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 HLA-DQA1P01909 254 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 PMCHP20382 165 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 NDUFA6P56556 154 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 RBX1P62877 108 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 GAGE6Q13070 117 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 COTL1Q14019 142 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 ENHOQ6UWT2 76 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 C20orf203Q8NBC4 194 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 SMIM2Q9BVW6 85 aa7.08□□□□□ -1.28
LIG1-210ENST00000596332 MRPL18Q9H0U6 180 aaKnown RBP7.08□□□□□ -1.28
LIG1-210ENST00000596332 TRBV25-1A0A075B6N4 114 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.07□□□□□ -1.28
LIG1-210ENST00000596332 A0A1B0GUV1 79 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 IGKV2-29A2NJV5 120 aaPredicted RBP7.07□□□□□ -1.28
LIG1-210ENST00000596332 K7EP13 123 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 APCSP02743 223 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 KRTAP26-1Q6PEX3 210 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 C6orf223Q8N319 242 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 URB1-AS1Q96HZ7 61 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 CHCHD5Q9BSY4 110 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 TMEM243Q9BU79 118 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 PRR34Q9NV39 138 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 LAMTOR2Q9Y2Q5 125 aa7.07□□□□□ -1.28
LIG1-210ENST00000596332 EPPK1P58107 5090 aaKnown RBP7.07□□□□□ -1.28
LIG1-210ENST00000596332 A0A1B0GVY2 172 aa7.06□□□□□ -1.28
LIG1-210ENST00000596332 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
LIG1-210ENST00000596332 BTF3P20290 206 aaKnown RBP7.06□□□□□ -1.28
LIG1-210ENST00000596332 AMTP48728 403 aa7.06□□□□□ -1.28
LIG1-210ENST00000596332 COX19Q49B96 90 aa7.06□□□□□ -1.28
LIG1-210ENST00000596332 TTC32Q5I0X7 151 aa7.06□□□□□ -1.28
LIG1-210ENST00000596332 C1orf134Q5TEV5 83 aa7.06□□□□□ -1.28
LIG1-210ENST00000596332 TCAPO15273 167 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 HIST1H2BKO60814 126 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 MT-ND6P03923 174 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 HIST1H2BJP06899 126 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 HIST1H2BOP23527 126 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 HIST1H2BBP33778 126 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 HIST1H2BDP58876 126 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 HIST1H2BCP62807 126 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 HIST2H2BEQ16778 126 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.05□□□□□ -1.28
LIG1-210ENST00000596332 Q8N8P6 123 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 HIST1H2BHQ93079 126 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 HIST1H2BNQ99877 126 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 HIST1H2BMQ99879 126 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 KLK12Q9UKR0 248 aa7.05□□□□□ -1.28
LIG1-210ENST00000596332 LOC389332A0A1B0GUA5 103 aa7.04□□□□□ -1.28
LIG1-210ENST00000596332 TMEM262E9PQX1 116 aa7.04□□□□□ -1.28
LIG1-210ENST00000596332 H7C423 109 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms