RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 DEFB131BA0A096LNP1 70 aa10.27□□□□□ -0.77
SHKBP1-211ENST00000595945 TRAV10A0A0B4J240 114 aa10.27□□□□□ -0.77
SHKBP1-211ENST00000595945 IGHV3-38A0A0C4DH36 116 aa10.27□□□□□ -0.77
SHKBP1-211ENST00000595945 A0A0J9YY99 117 aa10.27□□□□□ -0.77
SHKBP1-211ENST00000595945 LOC105371267A0A1B0GV96 52 aa10.27□□□□□ -0.77
SHKBP1-211ENST00000595945 AMTP48728 403 aa10.27□□□□□ -0.77
SHKBP1-211ENST00000595945 PHLDA1Q8WV24 401 aaPredicted RBP10.27□□□□□ -0.77
SHKBP1-211ENST00000595945 HBDP02042 147 aa10.26□□□□□ -0.77
SHKBP1-211ENST00000595945 DEFB104AQ8WTQ1 72 aa10.26□□□□□ -0.77
SHKBP1-211ENST00000595945 TMEM18Q96B42 140 aa10.26□□□□□ -0.77
SHKBP1-211ENST00000595945 TGP01266 2768 aa10.25□□□□□ -0.77
SHKBP1-211ENST00000595945 S100A2P29034 98 aa10.25□□□□□ -0.77
SHKBP1-211ENST00000595945 COTL1Q14019 142 aa10.25□□□□□ -0.77
SHKBP1-211ENST00000595945 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
SHKBP1-211ENST00000595945 ATP6V0E2Q8NHE4 81 aa10.25□□□□□ -0.77
SHKBP1-211ENST00000595945 CHCHD7Q9BUK0 85 aa10.25□□□□□ -0.77
SHKBP1-211ENST00000595945 GTSF1LQ9H1H1 148 aa10.25□□□□□ -0.77
SHKBP1-211ENST00000595945 A0A096LPF7 62 aa10.24□□□□□ -0.77
SHKBP1-211ENST00000595945 NUDT3O95989 172 aa10.24□□□□□ -0.77
SHKBP1-211ENST00000595945 FABP4P15090 132 aa10.24□□□□□ -0.77
SHKBP1-211ENST00000595945 MRPL23Q16540 153 aaKnown RBP10.24□□□□□ -0.77
SHKBP1-211ENST00000595945 C20orf203Q8NBC4 194 aa10.24□□□□□ -0.77
SHKBP1-211ENST00000595945 ICOSQ9Y6W8 199 aa10.24□□□□□ -0.77
SHKBP1-211ENST00000595945 SH2D6Q7Z4S9 175 aa10.23□□□□□ -0.77
SHKBP1-211ENST00000595945 TOMM6Q96B49 74 aa10.23□□□□□ -0.77
SHKBP1-211ENST00000595945 DYNC2H1Q8NCM8 4307 aaKnown RBP10.22□□□□□ -0.77
SHKBP1-211ENST00000595945 TMEM97Q5BJF2 176 aa10.22□□□□□ -0.77
SHKBP1-211ENST00000595945 C2orf66Q6UXQ4 117 aa10.22□□□□□ -0.77
SHKBP1-211ENST00000595945 LINC00173Q6ZV60 143 aa10.22□□□□□ -0.77
SHKBP1-211ENST00000595945 LEPROTL1O95214 131 aa10.21□□□□□ -0.77
SHKBP1-211ENST00000595945 BTF3P20290 206 aaKnown RBP10.21□□□□□ -0.77
SHKBP1-211ENST00000595945 G0S2P27469 103 aa10.21□□□□□ -0.77
SHKBP1-211ENST00000595945 TRBV6-8A0A0A6YYG3 113 aa10.2□□□□□ -0.78
SHKBP1-211ENST00000595945 LINC01549A6NIU2 74 aa10.2□□□□□ -0.78
SHKBP1-211ENST00000595945 TIRAPP58753 221 aa10.2□□□□□ -0.78
SHKBP1-211ENST00000595945 RPL39P62891 51 aaKnown RBP10.2□□□□□ -0.78
SHKBP1-211ENST00000595945 CYSLTR1Q9Y271 337 aa10.2□□□□□ -0.78
SHKBP1-211ENST00000595945 OR10D4PQ8NGN7 298 aa10.19□□□□□ -0.78
SHKBP1-211ENST00000595945 HSPB8Q9UJY1 196 aa10.19□□□□□ -0.78
SHKBP1-211ENST00000595945 DNAH7Q8WXX0 4024 aa10.19□□□□□ -0.78
SHKBP1-211ENST00000595945 TRBV25-1A0A075B6N4 114 aa10.18□□□□□ -0.78
SHKBP1-211ENST00000595945 IGIPA6NJ69 53 aa10.18□□□□□ -0.78
SHKBP1-211ENST00000595945 TMEM243Q9BU79 118 aa10.18□□□□□ -0.78
SHKBP1-211ENST00000595945 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-211ENST00000595945 IGKV2-29A2NJV5 120 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-211ENST00000595945 ATP5LO75964 103 aa10.17□□□□□ -0.78
SHKBP1-211ENST00000595945 C3orf79P0CE67 100 aa10.17□□□□□ -0.78
SHKBP1-211ENST00000595945 ERASQ7Z444 233 aa10.17□□□□□ -0.78
SHKBP1-211ENST00000595945 C15orf53Q8NAA6 179 aa10.17□□□□□ -0.78
SHKBP1-211ENST00000595945 FAM104AQ969W3 186 aa10.17□□□□□ -0.78
SHKBP1-211ENST00000595945 SCGB3A1Q96QR1 104 aa10.17□□□□□ -0.78
SHKBP1-211ENST00000595945 TIMM17AQ99595 171 aa10.17□□□□□ -0.78
SHKBP1-211ENST00000595945 TIMM21Q9BVV7 248 aa10.17□□□□□ -0.78
SHKBP1-211ENST00000595945 PYGO1Q9Y3Y4 419 aa10.17□□□□□ -0.78
SHKBP1-211ENST00000595945 H7C423 109 aa10.16□□□□□ -0.78
SHKBP1-211ENST00000595945 LYPD5Q6UWN5 251 aa10.16□□□□□ -0.78
SHKBP1-211ENST00000595945 MRPL52Q86TS9 123 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-211ENST00000595945 IFI27L1Q96BM0 104 aa10.16□□□□□ -0.78
SHKBP1-211ENST00000595945 TMEM141Q96I45 108 aa10.16□□□□□ -0.78
SHKBP1-211ENST00000595945 UBE2D4Q9Y2X8 147 aa10.16□□□□□ -0.78
SHKBP1-211ENST00000595945 NPSP0C0P6 89 aa10.15□□□□□ -0.78
SHKBP1-211ENST00000595945 LELP1Q5T871 98 aa10.15□□□□□ -0.78
SHKBP1-211ENST00000595945 SYS1-DBNDD2H3BUS1 97 aa10.14□□□□□ -0.79
SHKBP1-211ENST00000595945 AKR1D1P51857 326 aa10.14□□□□□ -0.79
SHKBP1-211ENST00000595945 CEMP1Q6PRD7 247 aaPredicted RBP10.14□□□□□ -0.79
SHKBP1-211ENST00000595945 SPATA12Q7Z6I5 190 aa10.14□□□□□ -0.79
SHKBP1-211ENST00000595945 SPANXA1Q9NS26 97 aa10.14□□□□□ -0.79
SHKBP1-211ENST00000595945 IGLV4-3A0A075B6K6 122 aa10.13□□□□□ -0.79
SHKBP1-211ENST00000595945 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.13□□□□□ -0.79
SHKBP1-211ENST00000595945 FGF6P10767 208 aa10.13□□□□□ -0.79
SHKBP1-211ENST00000595945 KRTDAPP60985 99 aa10.13□□□□□ -0.79
SHKBP1-211ENST00000595945 Q8N976 141 aa10.13□□□□□ -0.79
SHKBP1-211ENST00000595945 MAP1LC3CQ9BXW4 147 aa10.13□□□□□ -0.79
SHKBP1-211ENST00000595945 CSDC2Q9Y534 153 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-211ENST00000595945 TENM2Q9NT68 2774 aa10.12□□□□□ -0.79
SHKBP1-211ENST00000595945 IGLL5B9A064 214 aa10.12□□□□□ -0.79
SHKBP1-211ENST00000595945 MRPS36P82909 103 aaKnown RBP10.12□□□□□ -0.79
SHKBP1-211ENST00000595945 ESRGQ1W209 222 aa10.12□□□□□ -0.79
SHKBP1-211ENST00000595945 PET117Q6UWS5 81 aa10.12□□□□□ -0.79
SHKBP1-211ENST00000595945 BAALCQ8WXS3 180 aa10.12□□□□□ -0.79
SHKBP1-211ENST00000595945 OPRPNQ99935 248 aaPredicted RBP10.12□□□□□ -0.79
SHKBP1-211ENST00000595945 CHCHD5Q9BSY4 110 aa10.12□□□□□ -0.79
SHKBP1-211ENST00000595945 TRAV12-1A0A0B4J245 112 aa10.11□□□□□ -0.79
SHKBP1-211ENST00000595945 NUPR2A6NF83 97 aa10.11□□□□□ -0.79
SHKBP1-211ENST00000595945 UBE2L6O14933 153 aa10.11□□□□□ -0.79
SHKBP1-211ENST00000595945 ZNF25P17030 456 aaPredicted RBP10.11□□□□□ -0.79
SHKBP1-211ENST00000595945 SMAGPQ0VAQ4 97 aa10.11□□□□□ -0.79
SHKBP1-211ENST00000595945 GAGE6Q13070 117 aa10.11□□□□□ -0.79
SHKBP1-211ENST00000595945 JOSD1Q15040 202 aaPredicted RBP10.11□□□□□ -0.79
SHKBP1-211ENST00000595945 APLNQ9ULZ1 77 aa10.11□□□□□ -0.79
SHKBP1-211ENST00000595945 PYY3Q5JQD4 70 aa10.1□□□□□ -0.79
SHKBP1-211ENST00000595945 LINC01545Q5VT33 79 aa10.1□□□□□ -0.79
SHKBP1-211ENST00000595945 Q6ZN92 141 aa10.1□□□□□ -0.79
SHKBP1-211ENST00000595945 Q6ZUT4 128 aa10.1□□□□□ -0.79
SHKBP1-211ENST00000595945 AMELXQ99217 191 aa10.1□□□□□ -0.79
SHKBP1-211ENST00000595945 PLECQ15149 4684 aaKnown RBP10.1□□□□□ -0.79
SHKBP1-211ENST00000595945 CSMD3Q7Z407 3707 aa10.1□□□□□ -0.79
SHKBP1-211ENST00000595945 A0A1B0GUV1 79 aa10.09□□□□□ -0.79
SHKBP1-211ENST00000595945 PRSS1P07477 247 aa10.09□□□□□ -0.79
SHKBP1-211ENST00000595945 ODF1Q14990 250 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms