RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 FCER1GP30273 86 aa11.36□□□□□ -0.59
USHBP1-204ENST00000594190 AKR1D1P51857 326 aa11.36□□□□□ -0.59
USHBP1-204ENST00000594190 CEMP1Q6PRD7 247 aaPredicted RBP11.36□□□□□ -0.59
USHBP1-204ENST00000594190 Q6ZSN1 163 aa11.36□□□□□ -0.59
USHBP1-204ENST00000594190 SLC25A29Q8N8R3 303 aa11.36□□□□□ -0.59
USHBP1-204ENST00000594190 NUPR2A6NF83 97 aa11.35□□□□□ -0.59
USHBP1-204ENST00000594190 LEPROTL1O95214 131 aa11.35□□□□□ -0.59
USHBP1-204ENST00000594190 DAZ4Q86SG3 579 aaKnown RBP11.35□□□□□ -0.59
USHBP1-204ENST00000594190 FAM19A2Q8N3H0 131 aa11.35□□□□□ -0.59
USHBP1-204ENST00000594190 DAZ3Q9NR90 486 aaKnown RBP11.35□□□□□ -0.59
USHBP1-204ENST00000594190 PRO0255Q9UI72 69 aa11.35□□□□□ -0.59
USHBP1-204ENST00000594190 HHLA3Q9XRX5 114 aa11.35□□□□□ -0.59
USHBP1-204ENST00000594190 DEFB4AO15263 64 aa11.34□□□□□ -0.59
USHBP1-204ENST00000594190 OR10D4PQ8NGN7 298 aa11.34□□□□□ -0.59
USHBP1-204ENST00000594190 NUDT3O95989 172 aa11.33□□□□□ -0.6
USHBP1-204ENST00000594190 TMEM97Q5BJF2 176 aa11.32□□□□□ -0.6
USHBP1-204ENST00000594190 CELA1Q9UNI1 258 aa11.32□□□□□ -0.6
USHBP1-204ENST00000594190 HECTD4Q9Y4D8 3996 aa11.31□□□□□ -0.6
USHBP1-204ENST00000594190 ATP5LO75964 103 aa11.31□□□□□ -0.6
USHBP1-204ENST00000594190 P0DMU3 169 aa11.31□□□□□ -0.6
USHBP1-204ENST00000594190 FAM231AP0DMU4 169 aa11.31□□□□□ -0.6
USHBP1-204ENST00000594190 FAM231CP0DMU5 169 aa11.31□□□□□ -0.6
USHBP1-204ENST00000594190 CRYBA4P53673 196 aa11.31□□□□□ -0.6
USHBP1-204ENST00000594190 UBE2D3P61077 147 aa11.31□□□□□ -0.6
USHBP1-204ENST00000594190 UBE2D2P62837 147 aa11.31□□□□□ -0.6
USHBP1-204ENST00000594190 COTL1Q14019 142 aa11.31□□□□□ -0.6
USHBP1-204ENST00000594190 ZNRF2Q8NHG8 242 aa11.31□□□□□ -0.6
USHBP1-204ENST00000594190 PMCHL1Q16048 86 aa11.3□□□□□ -0.6
USHBP1-204ENST00000594190 MAP1LC3CQ9BXW4 147 aa11.3□□□□□ -0.6
USHBP1-204ENST00000594190 CYSLTR1Q9Y271 337 aa11.3□□□□□ -0.6
USHBP1-204ENST00000594190 A0A096LNJ9 63 aa11.29□□□□□ -0.6
USHBP1-204ENST00000594190 TSHBP01222 138 aa11.29□□□□□ -0.6
USHBP1-204ENST00000594190 SMIM6P0DI80 62 aa11.29□□□□□ -0.6
USHBP1-204ENST00000594190 BTF3P20290 206 aaKnown RBP11.29□□□□□ -0.6
USHBP1-204ENST00000594190 C12orf74Q32Q52 190 aa11.29□□□□□ -0.6
USHBP1-204ENST00000594190 SH2D6Q7Z4S9 175 aa11.29□□□□□ -0.6
USHBP1-204ENST00000594190 PHLDA1Q8WV24 401 aaPredicted RBP11.29□□□□□ -0.6
USHBP1-204ENST00000594190 TOMM6Q96B49 74 aa11.29□□□□□ -0.6
USHBP1-204ENST00000594190 GTSF1LQ9H1H1 148 aa11.29□□□□□ -0.6
USHBP1-204ENST00000594190 GAGE12JA6NER3 117 aa11.28□□□□□ -0.6
USHBP1-204ENST00000594190 PAX4O43316 350 aa11.28□□□□□ -0.6
USHBP1-204ENST00000594190 LINC00694P0DN24 101 aa11.28□□□□□ -0.6
USHBP1-204ENST00000594190 SMAGPQ0VAQ4 97 aa11.28□□□□□ -0.6
USHBP1-204ENST00000594190 GAGE1Q13065 139 aa11.28□□□□□ -0.6
USHBP1-204ENST00000594190 GAGE4Q13068 117 aa11.28□□□□□ -0.6
USHBP1-204ENST00000594190 GAGE5Q13069 117 aa11.28□□□□□ -0.6
USHBP1-204ENST00000594190 GAGE13Q4V321 117 aa11.28□□□□□ -0.6
USHBP1-204ENST00000594190 C11orf45Q8TAV5 145 aa11.28□□□□□ -0.6
USHBP1-204ENST00000594190 FAT2Q9NYQ8 4349 aa11.27□□□□□ -0.61
USHBP1-204ENST00000594190 F5H768 121 aa11.27□□□□□ -0.61
USHBP1-204ENST00000594190 H3BNG1 76 aa11.27□□□□□ -0.61
USHBP1-204ENST00000594190 JOSD1Q15040 202 aaPredicted RBP11.27□□□□□ -0.61
USHBP1-204ENST00000594190 C2orf66Q6UXQ4 117 aa11.27□□□□□ -0.61
USHBP1-204ENST00000594190 NEGR1Q7Z3B1 354 aa11.27□□□□□ -0.61
USHBP1-204ENST00000594190 TRAV26-1A0A087WT03 109 aa11.26□□□□□ -0.61
USHBP1-204ENST00000594190 C20orf202A1L168 122 aa11.26□□□□□ -0.61
USHBP1-204ENST00000594190 NPSP0C0P6 89 aa11.26□□□□□ -0.61
USHBP1-204ENST00000594190 GYPEP15421 78 aa11.26□□□□□ -0.61
USHBP1-204ENST00000594190 KRTDAPP60985 99 aa11.26□□□□□ -0.61
USHBP1-204ENST00000594190 PET117Q6UWS5 81 aa11.26□□□□□ -0.61
USHBP1-204ENST00000594190 SPATA12Q7Z6I5 190 aa11.26□□□□□ -0.61
USHBP1-204ENST00000594190 C20orf203Q8NBC4 194 aa11.26□□□□□ -0.61
USHBP1-204ENST00000594190 IFI27L1Q96BM0 104 aa11.26□□□□□ -0.61
USHBP1-204ENST00000594190 TMEM141Q96I45 108 aa11.26□□□□□ -0.61
USHBP1-204ENST00000594190 KLK5Q9Y337 293 aaPredicted RBP11.26□□□□□ -0.61
USHBP1-204ENST00000594190 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.25□□□□□ -0.61
USHBP1-204ENST00000594190 C3orf79P0CE67 100 aa11.25□□□□□ -0.61
USHBP1-204ENST00000594190 NANOS2P60321 138 aaKnown RBP11.25□□□□□ -0.61
USHBP1-204ENST00000594190 LGALS9CQ6DKI2 356 aa11.25□□□□□ -0.61
USHBP1-204ENST00000594190 ERASQ7Z444 233 aa11.25□□□□□ -0.61
USHBP1-204ENST00000594190 SCGB3A1Q96QR1 104 aa11.25□□□□□ -0.61
USHBP1-204ENST00000594190 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
USHBP1-204ENST00000594190 Q9UF83 564 aa11.25□□□□□ -0.61
USHBP1-204ENST00000594190 SYS1-DBNDD2H3BUS1 97 aa11.24□□□□□ -0.61
USHBP1-204ENST00000594190 H7C423 109 aa11.24□□□□□ -0.61
USHBP1-204ENST00000594190 MRPL23Q16540 153 aaKnown RBP11.24□□□□□ -0.61
USHBP1-204ENST00000594190 PAPPA-AS1Q5QFB9 102 aa11.24□□□□□ -0.61
USHBP1-204ENST00000594190 DNAH2Q9P225 4427 aa11.24□□□□□ -0.61
USHBP1-204ENST00000594190 ATP6V0E2Q8NHE4 81 aa11.23□□□□□ -0.61
USHBP1-204ENST00000594190 PYGO1Q9Y3Y4 419 aa11.23□□□□□ -0.61
USHBP1-204ENST00000594190 TRBV25-1A0A075B6N4 114 aa11.22□□□□□ -0.61
USHBP1-204ENST00000594190 SCGB1D1O95968 90 aa11.22□□□□□ -0.61
USHBP1-204ENST00000594190 HTN3P15516 51 aa11.22□□□□□ -0.61
USHBP1-204ENST00000594190 Q6ZN92 141 aa11.22□□□□□ -0.61
USHBP1-204ENST00000594190 VSIG2Q96IQ7 327 aa11.22□□□□□ -0.61
USHBP1-204ENST00000594190 SPANXA1Q9NS26 97 aa11.22□□□□□ -0.61
USHBP1-204ENST00000594190 ICOSQ9Y6W8 199 aa11.22□□□□□ -0.61
USHBP1-204ENST00000594190 TRAV10A0A0B4J240 114 aa11.21□□□□□ -0.61
USHBP1-204ENST00000594190 IGHV3-38A0A0C4DH36 116 aa11.21□□□□□ -0.61
USHBP1-204ENST00000594190 LOC100131303A0A0U1RQF7 123 aa11.21□□□□□ -0.61
USHBP1-204ENST00000594190 PYY3Q5JQD4 70 aa11.21□□□□□ -0.61
USHBP1-204ENST00000594190 Q6ZTC4 211 aa11.21□□□□□ -0.61
USHBP1-204ENST00000594190 CHCHD7Q9BUK0 85 aa11.21□□□□□ -0.61
USHBP1-204ENST00000594190 TIMM21Q9BVV7 248 aa11.21□□□□□ -0.61
USHBP1-204ENST00000594190 HERC2O95714 4834 aa11.21□□□□□ -0.61
USHBP1-204ENST00000594190 TRAV12-1A0A0B4J245 112 aa11.2□□□□□ -0.62
USHBP1-204ENST00000594190 IGIPA6NJ69 53 aa11.2□□□□□ -0.62
USHBP1-204ENST00000594190 LINC00173Q6ZV60 143 aa11.2□□□□□ -0.62
USHBP1-204ENST00000594190 TMEM243Q9BU79 118 aa11.2□□□□□ -0.62
USHBP1-204ENST00000594190 APLNQ9ULZ1 77 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms