RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 DAZ4Q86SG3 579 aaKnown RBP9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 DAND5Q8N907 189 aa9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 DAZ1Q9NQZ3 744 aaKnown RBP9.12□□□□□ -0.95
SMARCA4-217ENST00000591595 KNCNA6PVL3 124 aa9.11□□□□□ -0.95
SMARCA4-217ENST00000591595 ATP6V0E1O15342 81 aa9.11□□□□□ -0.95
SMARCA4-217ENST00000591595 DAZ2Q13117 558 aaKnown RBP9.11□□□□□ -0.95
SMARCA4-217ENST00000591595 PMAIP1Q13794 54 aa9.11□□□□□ -0.95
SMARCA4-217ENST00000591595 DAZ3Q9NR90 486 aaKnown RBP9.11□□□□□ -0.95
SMARCA4-217ENST00000591595 IGKV3D-20A0A0C4DH25 116 aa9.11□□□□□ -0.95
SMARCA4-217ENST00000591595 COX8CQ7Z4L0 72 aa9.11□□□□□ -0.95
SMARCA4-217ENST00000591595 ZNF561-AS1K7EIQ3 104 aa9.1□□□□□ -0.95
SMARCA4-217ENST00000591595 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.1□□□□□ -0.95
SMARCA4-217ENST00000591595 Q8N9W7 124 aa9.1□□□□□ -0.95
SMARCA4-217ENST00000591595 TRAV12-3A0A0B4J271 114 aa9.1□□□□□ -0.95
SMARCA4-217ENST00000591595 S100A4P26447 101 aaKnown RBP9.1□□□□□ -0.95
SMARCA4-217ENST00000591595 C11orf21Q9P2W6 132 aa9.1□□□□□ -0.95
SMARCA4-217ENST00000591595 M0R381 172 aa9.09□□□□□ -0.95
SMARCA4-217ENST00000591595 ZFP36P26651 326 aaKnown RBP9.09□□□□□ -0.95
SMARCA4-217ENST00000591595 RPL11P62913 178 aaKnown RBP9.09□□□□□ -0.95
SMARCA4-217ENST00000591595 MINOS1Q5TGZ0 78 aa9.09□□□□□ -0.95
SMARCA4-217ENST00000591595 MINOS1-NBL1R4GNA1 71 aa9.09□□□□□ -0.95
SMARCA4-217ENST00000591595 Q6ZSV7 163 aa9.09□□□□□ -0.95
SMARCA4-217ENST00000591595 C20orf197Q8N268 126 aa9.09□□□□□ -0.95
SMARCA4-217ENST00000591595 FAM110DQ8TAY7 271 aaPredicted RBP9.09□□□□□ -0.95
SMARCA4-217ENST00000591595 Q96MF0 132 aa9.09□□□□□ -0.95
SMARCA4-217ENST00000591595 IGKV3-7A0A075B6H7 116 aa9.09□□□□□ -0.95
SMARCA4-217ENST00000591595 SUMO2P61956 95 aaKnown RBP9.09□□□□□ -0.95
SMARCA4-217ENST00000591595 SVEP1Q4LDE5 3571 aa9.08□□□□□ -0.96
SMARCA4-217ENST00000591595 IGHG2P01859 326 aa9.08□□□□□ -0.96
SMARCA4-217ENST00000591595 Q8N6K4 173 aa9.08□□□□□ -0.96
SMARCA4-217ENST00000591595 ZFAND3Q9H8U3 227 aa9.08□□□□□ -0.96
SMARCA4-217ENST00000591595 IGHV3OR16-10A0A075B7F0 116 aa9.07□□□□□ -0.96
SMARCA4-217ENST00000591595 APRG1Q8IVJ8 170 aa9.07□□□□□ -0.96
SMARCA4-217ENST00000591595 INAFM2P0DMQ5 153 aa9.07□□□□□ -0.96
SMARCA4-217ENST00000591595 SAA4P35542 130 aa9.07□□□□□ -0.96
SMARCA4-217ENST00000591595 SS18Q15532 418 aa9.07□□□□□ -0.96
SMARCA4-217ENST00000591595 RBMY1BA6NDE4 496 aaKnown RBP9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 RBMY1EA6NEQ0 496 aaKnown RBP9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 MGPP08493 103 aa9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 RBMY1DP0C7P1 496 aaKnown RBP9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 RBMY1A1P0DJD3 496 aaKnown RBP9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 RBMY1CP0DJD4 496 aa9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 RBMY1FQ15415 496 aaKnown RBP9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 Q6JHZ5 121 aa9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 CCDC140Q96MF4 163 aa9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 LINC00474Q9P2X8 69 aa9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 BSNQ9UPA5 3926 aa9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 PSMG3-AS1Q96PY0 264 aa9.06□□□□□ -0.96
SMARCA4-217ENST00000591595 LEPROTO15243 131 aa9.05□□□□□ -0.96
SMARCA4-217ENST00000591595 TSHBP01222 138 aa9.05□□□□□ -0.96
SMARCA4-217ENST00000591595 GHRHP01286 108 aa9.05□□□□□ -0.96
SMARCA4-217ENST00000591595 XCL1P47992 114 aa9.05□□□□□ -0.96
SMARCA4-217ENST00000591595 XCL2Q9UBD3 114 aa9.05□□□□□ -0.96
SMARCA4-217ENST00000591595 PHLDA3Q9Y5J5 127 aa9.05□□□□□ -0.96
SMARCA4-217ENST00000591595 IGHV3-64A0A075B6Q5 118 aa9.04□□□□□ -0.96
SMARCA4-217ENST00000591595 CLPSL1A2RUU4 121 aa9.04□□□□□ -0.96
SMARCA4-217ENST00000591595 H7BZZ5 65 aa9.04□□□□□ -0.96
SMARCA4-217ENST00000591595 DEFB104AQ8WTQ1 72 aa9.04□□□□□ -0.96
SMARCA4-217ENST00000591595 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.04□□□□□ -0.961e-6■■■■□ 19.6
SMARCA4-217ENST00000591595 IGHV7-4-1A0A0J9YVY3 117 aa9.04□□□□□ -0.96
SMARCA4-217ENST00000591595 A0A0J9YXY3 114 aa9.04□□□□□ -0.96
SMARCA4-217ENST00000591595 SDHAF1A6NFY7 115 aa9.04□□□□□ -0.96
SMARCA4-217ENST00000591595 DEFB1P60022 68 aa9.04□□□□□ -0.96
SMARCA4-217ENST00000591595 IGF1P05019 195 aa9.04□□□□□ -0.96
SMARCA4-217ENST00000591595 FBXL19-AS1Q494R0 122 aa9.04□□□□□ -0.96
SMARCA4-217ENST00000591595 SPG11Q96JI7 2443 aa9.04□□□□□ -0.96
SMARCA4-217ENST00000591595 DNAL4O96015 105 aa9.03□□□□□ -0.96
SMARCA4-217ENST00000591595 BAALC-AS2P0C853 105 aa9.03□□□□□ -0.96
SMARCA4-217ENST00000591595 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
SMARCA4-217ENST00000591595 CD164Q04900 197 aa9.03□□□□□ -0.96
SMARCA4-217ENST00000591595 LYPD5Q6UWN5 251 aa9.03□□□□□ -0.96
SMARCA4-217ENST00000591595 COPS9Q8WXC6 57 aa9.03□□□□□ -0.96
SMARCA4-217ENST00000591595 ADORA2A-AS1P86434 159 aa9.03□□□□□ -0.96
SMARCA4-217ENST00000591595 RPL39LQ96EH5 51 aaKnown RBP9.03□□□□□ -0.96
SMARCA4-217ENST00000591595 UBE2D4Q9Y2X8 147 aa9.03□□□□□ -0.96
SMARCA4-217ENST00000591595 CREBBPQ92793 2442 aa9.02□□□□□ -0.96
SMARCA4-217ENST00000591595 TIMM17BO60830 172 aa9.02□□□□□ -0.97
SMARCA4-217ENST00000591595 ADAMTSL4-AS1Q5T5F5 129 aa9.02□□□□□ -0.97
SMARCA4-217ENST00000591595 TMEM61Q8N0U2 210 aa9.02□□□□□ -0.97
SMARCA4-217ENST00000591595 A0A0J9YX75 114 aa9.01□□□□□ -0.97
SMARCA4-217ENST00000591595 PRR9Q5T870 116 aa9.01□□□□□ -0.97
SMARCA4-217ENST00000591595 C11orf71Q6IPW1 123 aa9.01□□□□□ -0.97
SMARCA4-217ENST00000591595 C9orf47Q6ZRZ4 202 aa9.01□□□□□ -0.97
SMARCA4-217ENST00000591595 BPESC1Q9GZL8 116 aa9.01□□□□□ -0.97
SMARCA4-217ENST00000591595 IGHV3-11P01762 117 aa9.01□□□□□ -0.97
SMARCA4-217ENST00000591595 IGHV1-69DA0A0B4J2H0 117 aa9.01□□□□□ -0.97
SMARCA4-217ENST00000591595 RNASE4P34096 147 aaKnown RBP9.01□□□□□ -0.97
SMARCA4-217ENST00000591595 ZNF876PQ49A33 203 aa9.01□□□□□ -0.97
SMARCA4-217ENST00000591595 TRAV21A0A0B4J279 112 aa9□□□□□ -0.97
SMARCA4-217ENST00000591595 IGIPA6NJ69 53 aa9□□□□□ -0.97
SMARCA4-217ENST00000591595 ADARB2-AS1A8MUL3 147 aa9□□□□□ -0.97
SMARCA4-217ENST00000591595 RBM3P98179 157 aaKnown RBP9□□□□□ -0.97
SMARCA4-217ENST00000591595 LITAFQ99732 161 aa9□□□□□ -0.97
SMARCA4-217ENST00000591595 F6UB75 175 aa8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 CCKP06307 115 aa8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 MRPL53Q96EL3 112 aaKnown RBP8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 TRBV7-6A0A0J9YX20 115 aa8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 HRNRQ86YZ3 2850 aaPredicted RBP8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 HIVEP3Q5T1R4 2406 aa8.99□□□□□ -0.97
SMARCA4-217ENST00000591595 NCOR2Q9Y618 2525 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms