RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 USP17L23D6RBM5 183 aa8.95□□□□□ -0.98
NEDD4L-228ENST00000590248 SRP19P09132 144 aaKnown RBP8.95□□□□□ -0.98
NEDD4L-228ENST00000590248 REG3AQ06141 175 aa8.95□□□□□ -0.98
NEDD4L-228ENST00000590248 FAM231DQ6ZW35 169 aa8.95□□□□□ -0.98
NEDD4L-228ENST00000590248 FAM210AQ96ND0 272 aa8.95□□□□□ -0.98
NEDD4L-228ENST00000590248 SMIM7Q9BQ49 75 aa8.95□□□□□ -0.98
NEDD4L-228ENST00000590248 FLG2Q5D862 2391 aaPredicted RBP8.94□□□□□ -0.98
NEDD4L-228ENST00000590248 A8MWL6 223 aa8.94□□□□□ -0.98
NEDD4L-228ENST00000590248 GAS8-AS1O95177 125 aa8.94□□□□□ -0.98
NEDD4L-228ENST00000590248 COTL1Q14019 142 aa8.94□□□□□ -0.98
NEDD4L-228ENST00000590248 LINC01551Q86U37 167 aa8.94□□□□□ -0.98
NEDD4L-228ENST00000590248 PRSS1P07477 247 aa8.93□□□□□ -0.98
NEDD4L-228ENST00000590248 AMTP48728 403 aa8.93□□□□□ -0.98
NEDD4L-228ENST00000590248 SCXQ7RTU7 201 aa8.93□□□□□ -0.98
NEDD4L-228ENST00000590248 SMIM15Q7Z3B0 74 aa8.93□□□□□ -0.98
NEDD4L-228ENST00000590248 A0A1B0GUV1 79 aa8.92□□□□□ -0.98
NEDD4L-228ENST00000590248 C9JQL5 133 aa8.92□□□□□ -0.98
NEDD4L-228ENST00000590248 UBE2L6O14933 153 aa8.92□□□□□ -0.98
NEDD4L-228ENST00000590248 C14orf177Q52M58 125 aa8.92□□□□□ -0.98
NEDD4L-228ENST00000590248 HIGD1CA8MV81 97 aa8.91□□□□□ -0.98
NEDD4L-228ENST00000590248 LINC00528Q8N1L1 170 aa8.91□□□□□ -0.98
NEDD4L-228ENST00000590248 SRRM2Q9UQ35 2752 aaKnown RBP8.9□□□□□ -0.98
NEDD4L-228ENST00000590248 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.9□□□□□ -0.98
NEDD4L-228ENST00000590248 IGKV3OR2-268A0A0C4DH90 116 aa8.9□□□□□ -0.98
NEDD4L-228ENST00000590248 IGKV2-29A2NJV5 120 aaPredicted RBP8.9□□□□□ -0.98
NEDD4L-228ENST00000590248 SRSF3P84103 164 aaKnown RBP8.9□□□□□ -0.98
NEDD4L-228ENST00000590248 CT83Q5H943 113 aa8.9□□□□□ -0.98
NEDD4L-228ENST00000590248 CIRBP-AS1Q8TBR5 109 aa8.9□□□□□ -0.98
NEDD4L-228ENST00000590248 TSKUQ8WUA8 353 aa8.9□□□□□ -0.98
NEDD4L-228ENST00000590248 BORCS7Q96B45 105 aa8.9□□□□□ -0.98
NEDD4L-228ENST00000590248 OSTCQ9NRP0 149 aa8.9□□□□□ -0.98
NEDD4L-228ENST00000590248 SDHAF1A6NFY7 115 aa8.89□□□□□ -0.99
NEDD4L-228ENST00000590248 RNF185Q96GF1 192 aa8.89□□□□□ -0.99
NEDD4L-228ENST00000590248 CHAC1Q9BUX1 264 aa8.89□□□□□ -0.99
NEDD4L-228ENST00000590248 V9GYV3 84 aa8.89□□□□□ -0.99
NEDD4L-228ENST00000590248 MYCBP2O75592 4640 aa8.89□□□□□ -0.99
NEDD4L-228ENST00000590248 TRAV8-4A0A0B4J246 113 aa8.88□□□□□ -0.99
NEDD4L-228ENST00000590248 A0A1B0GUT8 65 aa8.88□□□□□ -0.99
NEDD4L-228ENST00000590248 NDUFS6O75380 124 aaKnown RBP8.88□□□□□ -0.99
NEDD4L-228ENST00000590248 PMCHP20382 165 aa8.88□□□□□ -0.99
NEDD4L-228ENST00000590248 RPS10P46783 165 aaKnown RBP8.88□□□□□ -0.99
NEDD4L-228ENST00000590248 RPL23P62829 140 aaKnown RBP8.88□□□□□ -0.99
NEDD4L-228ENST00000590248 TMEM241Q24JQ0 296 aa8.88□□□□□ -0.99
NEDD4L-228ENST00000590248 AMN1Q8IY45 258 aa8.88□□□□□ -0.99
NEDD4L-228ENST00000590248 ISOC2Q96AB3 205 aa8.88□□□□□ -0.99
NEDD4L-228ENST00000590248 HERC1Q15751 4861 aa8.87□□□□□ -0.99
NEDD4L-228ENST00000590248 FAM231BA6NCW3 169 aa8.87□□□□□ -0.99
NEDD4L-228ENST00000590248 APCSP02743 223 aa8.87□□□□□ -0.99
NEDD4L-228ENST00000590248 RAB4AP20338 218 aa8.87□□□□□ -0.99
NEDD4L-228ENST00000590248 AMMECR1LQ6DCA0 310 aa8.87□□□□□ -0.99
NEDD4L-228ENST00000590248 DGAT2L7PQ6IED9 249 aa8.87□□□□□ -0.99
NEDD4L-228ENST00000590248 RNASEKQ6P5S7 137 aaKnown RBP8.87□□□□□ -0.99
NEDD4L-228ENST00000590248 TEX261Q6UWH6 196 aa8.87□□□□□ -0.99
NEDD4L-228ENST00000590248 C9orf163Q8N9P6 203 aa8.87□□□□□ -0.99
NEDD4L-228ENST00000590248 NUP35Q8NFH5 326 aa8.87□□□□□ -0.99
NEDD4L-228ENST00000590248 TMEM191AQ9H0A3 160 aa8.87□□□□□ -0.99
NEDD4L-228ENST00000590248 hDV102S1A0JD36 115 aa8.86□□□□□ -0.99
NEDD4L-228ENST00000590248 SMKR1H3BMG3 65 aa8.86□□□□□ -0.99
NEDD4L-228ENST00000590248 I3L3M4 83 aa8.86□□□□□ -0.99
NEDD4L-228ENST00000590248 NCR2O95944 276 aa8.86□□□□□ -0.99
NEDD4L-228ENST00000590248 SLPIP03973 132 aa8.86□□□□□ -0.99
NEDD4L-228ENST00000590248 ADIRFQ15847 76 aa8.86□□□□□ -0.99
NEDD4L-228ENST00000590248 TRBV6-5A0A0K0K1A5 114 aa8.85□□□□□ -0.99
NEDD4L-228ENST00000590248 GAGE12HA6NDE8 117 aa8.85□□□□□ -0.99
NEDD4L-228ENST00000590248 PANO1I0J062 215 aa8.85□□□□□ -0.99
NEDD4L-228ENST00000590248 PLA2G1BP04054 148 aaKnown RBP8.85□□□□□ -0.99
NEDD4L-228ENST00000590248 FGF6P10767 208 aa8.85□□□□□ -0.99
NEDD4L-228ENST00000590248 ST20Q9HBF5 79 aa8.85□□□□□ -0.99
NEDD4L-228ENST00000590248 TSHBP01222 138 aa8.84□□□□□ -0.99
NEDD4L-228ENST00000590248 RIGQ13278 110 aa8.84□□□□□ -0.99
NEDD4L-228ENST00000590248 PEA15Q15121 130 aa8.84□□□□□ -0.99
NEDD4L-228ENST00000590248 FAM74A3Q4VXF1 159 aa8.84□□□□□ -0.99
NEDD4L-228ENST00000590248 CLRN3Q8NCR9 226 aa8.84□□□□□ -0.99
NEDD4L-228ENST00000590248 TMEM242Q9NWH2 141 aa8.84□□□□□ -0.99
NEDD4L-228ENST00000590248 NAT8Q9UHE5 227 aa8.84□□□□□ -0.99
NEDD4L-228ENST00000590248 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -0.99
NEDD4L-228ENST00000590248 ESDP10768 282 aa8.83□□□□□ -1
NEDD4L-228ENST00000590248 POLR2KP53803 58 aaKnown RBP8.83□□□□□ -1
NEDD4L-228ENST00000590248 SDIM1Q6ZPB5 146 aa8.83□□□□□ -1
NEDD4L-228ENST00000590248 H7C423 109 aa8.82□□□□□ -1
NEDD4L-228ENST00000590248 KRTAP10-4P60372 401 aaPredicted RBP8.82□□□□□ -1
NEDD4L-228ENST00000590248 C15orf56Q8N910 161 aa8.82□□□□□ -1
NEDD4L-228ENST00000590248 CHCHD10Q8WYQ3 142 aaPredicted RBP8.82□□□□□ -1
NEDD4L-228ENST00000590248 MRAP2Q96G30 205 aa8.82□□□□□ -1
NEDD4L-228ENST00000590248 NAT8BQ9UHF3 227 aa8.82□□□□□ -1
NEDD4L-228ENST00000590248 CAMPP49913 170 aa8.81□□□□□ -1
NEDD4L-228ENST00000590248 HIGD2BQ4VC39 106 aa8.81□□□□□ -1
NEDD4L-228ENST00000590248 TRBV27A0A0K0K1C4 114 aa8.8□□□□□ -1
NEDD4L-228ENST00000590248 SMIM27A0A1W2PRY6 76 aa8.8□□□□□ -1
NEDD4L-228ENST00000590248 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
NEDD4L-228ENST00000590248 MRPL51Q4U2R6 128 aaKnown RBP8.8□□□□□ -1
NEDD4L-228ENST00000590248 NRACQ8N912 160 aa8.8□□□□□ -1
NEDD4L-228ENST00000590248 OR5A1Q8NGJ0 315 aa8.8□□□□□ -1
NEDD4L-228ENST00000590248 BTF3L4Q96K17 158 aa8.8□□□□□ -1
NEDD4L-228ENST00000590248 AP5S1Q9NUS5 200 aa8.8□□□□□ -1
NEDD4L-228ENST00000590248 LRP1Q07954 4544 aaKnown RBP8.79□□□□□ -1
NEDD4L-228ENST00000590248 DMBT1Q9UGM3 2413 aaPredicted RBP8.79□□□□□ -1
NEDD4L-228ENST00000590248 CHTF8P0CG12 524 aa8.79□□□□□ -1
NEDD4L-228ENST00000590248 XCL1P47992 114 aa8.79□□□□□ -1
NEDD4L-228ENST00000590248 TMEM101Q96IK0 257 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms