RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 A0A087WX48 190 aa2.35□□□□□ -2.03
ZNF540-207ENST00000589285 A0A0J9YWU9 116 aa2.35□□□□□ -2.03
ZNF540-207ENST00000589285 RBMY1BA6NDE4 496 aaKnown RBP2.35□□□□□ -2.03
ZNF540-207ENST00000589285 RBMY1EA6NEQ0 496 aaKnown RBP2.35□□□□□ -2.03
ZNF540-207ENST00000589285 K7EQG2 157 aa2.35□□□□□ -2.03
ZNF540-207ENST00000589285 PFN1P07737 140 aaKnown RBP2.35□□□□□ -2.03
ZNF540-207ENST00000589285 RBMY1DP0C7P1 496 aaKnown RBP2.35□□□□□ -2.03
ZNF540-207ENST00000589285 OR10G8Q8NGN5 311 aa2.35□□□□□ -2.03
ZNF540-207ENST00000589285 OR13C6PQ8NH95 151 aa2.35□□□□□ -2.03
ZNF540-207ENST00000589285 MANBALQ9NQG1 85 aa2.35□□□□□ -2.03
ZNF540-207ENST00000589285 SPANXA1Q9NS26 97 aa2.35□□□□□ -2.03
ZNF540-207ENST00000589285 ZNF256Q9Y2P7 627 aaPredicted RBP2.35□□□□□ -2.03
ZNF540-207ENST00000589285 TMEM189A5PLL7 270 aa2.34□□□□□ -2.03
ZNF540-207ENST00000589285 FNDC10F2Z333 226 aa2.34□□□□□ -2.03
ZNF540-207ENST00000589285 H7BYZ3 331 aa2.34□□□□□ -2.03
ZNF540-207ENST00000589285 IGLV1-51P01701 117 aa2.34□□□□□ -2.03
ZNF540-207ENST00000589285 P01737 135 aa2.34□□□□□ -2.03
ZNF540-207ENST00000589285 RBMY1A1P0DJD3 496 aaKnown RBP2.34□□□□□ -2.03
ZNF540-207ENST00000589285 RBMY1CP0DJD4 496 aa2.34□□□□□ -2.03
ZNF540-207ENST00000589285 CRIP1P50238 77 aa2.34□□□□□ -2.03
ZNF540-207ENST00000589285 PSG9Q00887 426 aa2.34□□□□□ -2.03
ZNF540-207ENST00000589285 RBMY1FQ15415 496 aaKnown RBP2.34□□□□□ -2.03
ZNF540-207ENST00000589285 Q86TA4 180 aa2.34□□□□□ -2.03
ZNF540-207ENST00000589285 OTORQ9NRC9 128 aa2.34□□□□□ -2.03
ZNF540-207ENST00000589285 TRAV26-2A0A0B4J265 109 aa2.34□□□□□ -2.04
ZNF540-207ENST00000589285 SMKR1H3BMG3 65 aa2.34□□□□□ -2.04
ZNF540-207ENST00000589285 SH2D1AO60880 128 aa2.34□□□□□ -2.04
ZNF540-207ENST00000589285 ZNF138P52744 262 aa2.34□□□□□ -2.04
ZNF540-207ENST00000589285 C9orf66Q5T8R8 295 aa2.34□□□□□ -2.04
ZNF540-207ENST00000589285 FAM159AQ6UWV7 190 aa2.34□□□□□ -2.04
ZNF540-207ENST00000589285 BAALCQ8WXS3 180 aa2.34□□□□□ -2.04
ZNF540-207ENST00000589285 OPRPNQ99935 248 aaPredicted RBP2.34□□□□□ -2.04
ZNF540-207ENST00000589285 MRPS16Q9Y3D3 137 aaKnown RBP2.34□□□□□ -2.04
ZNF540-207ENST00000589285 A0A0J9YX75 114 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 FABP5P3A8MUU1 101 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 HIGD1CA8MV81 97 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 H3BMM0 161 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 NCR2O95944 276 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 MGPP08493 103 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 NEGR1Q7Z3B1 354 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 Q8N976 141 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 OR10AG1Q8NH19 301 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 SLC50A1Q9BRV3 221 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 MAP1LC3AQ9H492 121 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 Q9UF83 564 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 TRGV1A0A0A0MS02 117 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 A0A0J9YY99 117 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 LOC389332A0A1B0GUA5 103 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 TINCRA0A1B0GVN0 87 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 EPM2AB3EWF7 344 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 K7EMT4 169 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 SOCS3O14543 225 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 HSBP1O75506 76 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 ARMS2P0C7Q2 107 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 IGLC3P0DOY3 106 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 EVI2AP22794 236 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 C6orf226Q5I0X4 101 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 FAM162BQ5T6X4 162 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 SPANXN1Q5VSR9 72 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 C14orf178Q8N769 122 aaPredicted RBP2.33□□□□□ -2.04
ZNF540-207ENST00000589285 DNAJC30Q96LL9 226 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 SPAG8Q99932 426 aaPredicted RBP2.33□□□□□ -2.04
ZNF540-207ENST00000589285 NOP10Q9NPE3 64 aaKnown RBP2.33□□□□□ -2.04
ZNF540-207ENST00000589285 TRAV1-1A0A0B4J248 108 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 LGALS9O00182 355 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 NUPR1O60356 82 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 IGLV2-8P01709 118 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 SPINK8P0C7L1 97 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 P0DMU3 169 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 FAM231AP0DMU4 169 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 FAM231CP0DMU5 169 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 GATA1P15976 413 aaPredicted RBP2.33□□□□□ -2.04
ZNF540-207ENST00000589285 LYZL1Q6UWQ5 148 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 DPPA3Q6W0C5 159 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 SBSPONQ8IVN8 264 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 TMEM126AQ9H061 195 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 ZNF492Q9P255 531 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 KLF12Q9Y4X4 402 aa2.33□□□□□ -2.04
ZNF540-207ENST00000589285 TRGV2A0A075B6R0 118 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 IGHV3-38A0A0C4DH36 116 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 TMEM250H0YL14 139 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 SPATA45Q537H7 98 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 TMEM256Q8N2U0 113 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 ZFAND2AQ8N6M9 145 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 AP1S3Q96PC3 154 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 TMEM14CQ9P0S9 112 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 NAT8BQ9UHF3 227 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 CYSLTR1Q9Y271 337 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 PHLDA3Q9Y5J5 127 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 TAX1BP3O14907 124 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 TSPOP30536 169 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 PDE6HQ13956 83 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 OR10J3Q5JRS4 329 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 Q6ZTI0 123 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 FAM19A5Q7Z5A7 132 aaPredicted RBP2.32□□□□□ -2.04
ZNF540-207ENST00000589285 GTSF1Q8WW33 167 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 IGF2BP2-AS1Q96M15 143 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 SAMD10Q9BYL1 202 aa2.32□□□□□ -2.04
ZNF540-207ENST00000589285 DNAH3Q8TD57 4116 aa2.31□□□□□ -2.04
ZNF540-207ENST00000589285 IGKV3OR2-268A0A0C4DH90 116 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms