RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, human

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFIX-211	ENST00000588680	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.65	□□□□□ -1.67
NFIX-211	ENST00000588680	NKX6-2	Q9C056	277 aa	Predicted RBP	4.65	□□□□□ -1.67
NFIX-211	ENST00000588680	CRCT1	Q9UGL9	99 aa		4.65	□□□□□ -1.67
NFIX-211	ENST00000588680	MUC17	Q685J3	4493 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	IGHV1-58	A0A0C4DH39	117 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	LOC107984640	A0A0U1RRK4	108 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	CTXND1	A0A1B0GTU2	59 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	BCL2	P10415	239 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	UBE2D1	P51668	147 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	SERF2	P84101	59 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	C9orf116	Q5BN46	136 aa	Predicted RBP	4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	AMMECR1L	Q6DCA0	310 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	RASL11A	Q6T310	242 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	PHF5A	Q7RTV0	110 aa	Known RBP	4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	ENKUR	Q8TC29	256 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	CCDC32	Q9BV29	185 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	MED28	Q9H204	178 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	TNFSF18	Q9UNG2	199 aa		4.64	□□□□□ -1.67
NFIX-211	ENST00000588680	SSNA1	O43805	119 aa		4.63	□□□□□ -1.67
NFIX-211	ENST00000588680	CAMP	P49913	170 aa		4.63	□□□□□ -1.67
NFIX-211	ENST00000588680	RNASEK	Q6P5S7	137 aa	Known RBP	4.63	□□□□□ -1.67
NFIX-211	ENST00000588680	STOML3	Q8TAV4	291 aa		4.63	□□□□□ -1.67
NFIX-211	ENST00000588680	TCEAL7	Q9BRU2	100 aa		4.63	□□□□□ -1.67
NFIX-211	ENST00000588680	TPPP3	Q9BW30	176 aa		4.63	□□□□□ -1.67
NFIX-211	ENST00000588680	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.62	□□□□□ -1.67
NFIX-211	ENST00000588680	TRAV1-1	A0A0B4J248	108 aa		4.62	□□□□□ -1.67
NFIX-211	ENST00000588680	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.62	□□□□□ -1.67
NFIX-211	ENST00000588680	INMT-MINDY4	F8WBC2	141 aa		4.62	□□□□□ -1.67
NFIX-211	ENST00000588680	ZNF561-AS1	K7EIQ3	104 aa		4.62	□□□□□ -1.67
NFIX-211	ENST00000588680	CCL25	O15444	150 aa		4.62	□□□□□ -1.67
NFIX-211	ENST00000588680	RPL13A	P40429	203 aa	Known RBP	4.62	□□□□□ -1.67
NFIX-211	ENST00000588680	EIF5A	P63241	154 aa	Known RBP	4.62	□□□□□ -1.67
NFIX-211	ENST00000588680	RPL18A	Q02543	176 aa	Known RBP	4.62	□□□□□ -1.67
NFIX-211	ENST00000588680	CST9LP1	Q5W188	147 aa		4.62	□□□□□ -1.67
NFIX-211	ENST00000588680	KRTAP11-1	Q8IUC1	163 aa		4.62	□□□□□ -1.67
NFIX-211	ENST00000588680	MAP1LC3B2	A6NCE7	125 aa		4.61	□□□□□ -1.67
NFIX-211	ENST00000588680	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.61	□□□□□ -1.67
NFIX-211	ENST00000588680	APOM	O95445	188 aa		4.61	□□□□□ -1.67
NFIX-211	ENST00000588680	TSPAN13	O95857	204 aa		4.61	□□□□□ -1.67
NFIX-211	ENST00000588680	FGF6	P10767	208 aa		4.61	□□□□□ -1.67
NFIX-211	ENST00000588680	MEF2B	Q02080	365 aa	Predicted RBP	4.61	□□□□□ -1.67
NFIX-211	ENST00000588680	LCE2D	Q5TA82	110 aa	Predicted RBP	4.61	□□□□□ -1.67
NFIX-211	ENST00000588680		Q6ZNX1	250 aa		4.61	□□□□□ -1.67
NFIX-211	ENST00000588680	OR5A1	Q8NGJ0	315 aa		4.61	□□□□□ -1.67
NFIX-211	ENST00000588680	ISOC2	Q96AB3	205 aa		4.61	□□□□□ -1.67
NFIX-211	ENST00000588680	MAP1LC3B	Q9GZQ8	125 aa		4.61	□□□□□ -1.67
NFIX-211	ENST00000588680	NIT2	Q9NQR4	276 aa		4.61	□□□□□ -1.67
NFIX-211	ENST00000588680	IGLV4-69	A0A075B6H9	119 aa		4.6	□□□□□ -1.67
NFIX-211	ENST00000588680		A0A087WZ39	114 aa		4.6	□□□□□ -1.67
NFIX-211	ENST00000588680	LINC00959	A0A1B0GUT2	108 aa		4.6	□□□□□ -1.67
NFIX-211	ENST00000588680	SCO2	A0A1W2PP80	73 aa		4.6	□□□□□ -1.67
NFIX-211	ENST00000588680	IGLC6	P0CF74	106 aa		4.6	□□□□□ -1.67
NFIX-211	ENST00000588680	NTF3	P20783	257 aa		4.6	□□□□□ -1.67
NFIX-211	ENST00000588680	FHIT	P49789	147 aa		4.6	□□□□□ -1.67
NFIX-211	ENST00000588680	BAGE2	Q86Y30	109 aa		4.6	□□□□□ -1.67
NFIX-211	ENST00000588680	NUP35	Q8NFH5	326 aa		4.6	□□□□□ -1.67
NFIX-211	ENST00000588680	MLST8	Q9BVC4	326 aa		4.6	□□□□□ -1.67
NFIX-211	ENST00000588680	APCS	P02743	223 aa		4.59	□□□□□ -1.67
NFIX-211	ENST00000588680	DEFA1	P59665	94 aa		4.59	□□□□□ -1.67
NFIX-211	ENST00000588680	AKR1C8P	Q5T2L2	129 aa		4.59	□□□□□ -1.67
NFIX-211	ENST00000588680	RPL7L1	Q6DKI1	246 aa	Known RBP	4.59	□□□□□ -1.67
NFIX-211	ENST00000588680	CAMK2N2	Q96S95	79 aa		4.59	□□□□□ -1.67
NFIX-211	ENST00000588680	FAM168B	A1KXE4	195 aa		4.58	□□□□□ -1.68
NFIX-211	ENST00000588680		H7C423	109 aa		4.58	□□□□□ -1.68
NFIX-211	ENST00000588680	BCL2L11	O43521	198 aa		4.58	□□□□□ -1.68
NFIX-211	ENST00000588680	PAGE4	O60829	102 aa		4.58	□□□□□ -1.68
NFIX-211	ENST00000588680	NCR2	O95944	276 aa		4.58	□□□□□ -1.68
NFIX-211	ENST00000588680	S100A9	P06702	114 aa	Known RBP	4.58	□□□□□ -1.68
NFIX-211	ENST00000588680	TRGC1	P0CF51	173 aa		4.58	□□□□□ -1.68
NFIX-211	ENST00000588680	ZNF25	P17030	456 aa	Predicted RBP	4.58	□□□□□ -1.68
NFIX-211	ENST00000588680	CD164L2	Q6UWJ8	174 aa		4.58	□□□□□ -1.68
NFIX-211	ENST00000588680	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.58	□□□□□ -1.68
NFIX-211	ENST00000588680	OR2D3	Q8NGH3	330 aa		4.58	□□□□□ -1.68
NFIX-211	ENST00000588680	RPL39L	Q96EH5	51 aa	Known RBP	4.58	□□□□□ -1.68
NFIX-211	ENST00000588680	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.57	□□□□□ -1.68
NFIX-211	ENST00000588680	MAL	P21145	153 aa		4.57	□□□□□ -1.68
NFIX-211	ENST00000588680	SS18	Q15532	418 aa		4.57	□□□□□ -1.68
NFIX-211	ENST00000588680	GATD1	Q8NB37	220 aa		4.57	□□□□□ -1.68
NFIX-211	ENST00000588680	TSKU	Q8WUA8	353 aa		4.57	□□□□□ -1.68
NFIX-211	ENST00000588680	TMEM101	Q96IK0	257 aa		4.57	□□□□□ -1.68
NFIX-211	ENST00000588680	BTF3L4	Q96K17	158 aa		4.57	□□□□□ -1.68
NFIX-211	ENST00000588680	OPRPN	Q99935	248 aa	Predicted RBP	4.57	□□□□□ -1.68
NFIX-211	ENST00000588680	MARVELD1	Q9BSK0	173 aa		4.57	□□□□□ -1.68
NFIX-211	ENST00000588680	COX7A2L	O14548	114 aa		4.56	□□□□□ -1.68
NFIX-211	ENST00000588680	UPK1B	O75841	260 aa		4.56	□□□□□ -1.68
NFIX-211	ENST00000588680	RPS20	P60866	119 aa	Known RBP	4.56	□□□□□ -1.68
NFIX-211	ENST00000588680	EIF5AL1	Q6IS14	154 aa	Known RBP	4.56	□□□□□ -1.68
NFIX-211	ENST00000588680	RETNLB	Q9BQ08	111 aa		4.56	□□□□□ -1.68
NFIX-211	ENST00000588680	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.56	□□□□□ -1.68
NFIX-211	ENST00000588680		A0A1B0GV50	99 aa		4.55	□□□□□ -1.68
NFIX-211	ENST00000588680	C19orf71	A6NCJ1	209 aa		4.55	□□□□□ -1.68
NFIX-211	ENST00000588680	PFDN1	O60925	122 aa		4.55	□□□□□ -1.68
NFIX-211	ENST00000588680	RPL35	P42766	123 aa	Known RBP	4.55	□□□□□ -1.68
NFIX-211	ENST00000588680	UBE2B	P63146	152 aa		4.55	□□□□□ -1.68
NFIX-211	ENST00000588680	IFITM3	Q01628	133 aa		4.55	□□□□□ -1.68
NFIX-211	ENST00000588680	SPAG11B	Q08648	103 aa		4.55	□□□□□ -1.68
NFIX-211	ENST00000588680	LYZL1	Q6UWQ5	148 aa		4.55	□□□□□ -1.68
NFIX-211	ENST00000588680	C2orf48	Q96LS8	159 aa		4.55	□□□□□ -1.68
NFIX-211	ENST00000588680	CDIP1	Q9H305	208 aa		4.55	□□□□□ -1.68
NFIX-211	ENST00000588680	RPP21	Q9H633	154 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms