RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 PMCHL1Q16048 86 aa14.02□□□□□ -0.16
ATG4D-208ENST00000588667 RYR3Q15413 4870 aa14.02□□□□□ -0.17
ATG4D-208ENST00000588667 TMEM70Q9BUB7 260 aa14.01□□□□□ -0.17
ATG4D-208ENST00000588667 SDHAF1A6NFY7 115 aa14.01□□□□□ -0.17
ATG4D-208ENST00000588667 VCYO14598 125 aa14.01□□□□□ -0.17
ATG4D-208ENST00000588667 POLR2KP53803 58 aaKnown RBP14.01□□□□□ -0.17
ATG4D-208ENST00000588667 KMT2AQ03164 3969 aa14.01□□□□□ -0.17
ATG4D-208ENST00000588667 Q6ZSN1 163 aa14.01□□□□□ -0.17
ATG4D-208ENST00000588667 LAGE3Q14657 143 aa14□□□□□ -0.17
ATG4D-208ENST00000588667 TNFRSF18Q9Y5U5 241 aa14□□□□□ -0.17
ATG4D-208ENST00000588667 HYDINQ4G0P3 5121 aa13.99□□□□□ -0.17
ATG4D-208ENST00000588667 TRBV27A0A0K0K1C4 114 aa13.99□□□□□ -0.17
ATG4D-208ENST00000588667 HBDP02042 147 aa13.99□□□□□ -0.17
ATG4D-208ENST00000588667 DNAJC30Q96LL9 226 aa13.99□□□□□ -0.17
ATG4D-208ENST00000588667 TCAPO15273 167 aa13.98□□□□□ -0.17
ATG4D-208ENST00000588667 LEPROTL1O95214 131 aa13.98□□□□□ -0.17
ATG4D-208ENST00000588667 ORMDL2Q53FV1 153 aa13.98□□□□□ -0.17
ATG4D-208ENST00000588667 UBE2DNLQ8IWF7 75 aa13.98□□□□□ -0.17
ATG4D-208ENST00000588667 KIR2DL4Q99706 377 aa13.98□□□□□ -0.17
ATG4D-208ENST00000588667 ICOSQ9Y6W8 199 aa13.98□□□□□ -0.17
ATG4D-208ENST00000588667 A0A096LPF7 62 aa13.97□□□□□ -0.17
ATG4D-208ENST00000588667 TRBV10-1A0A0K0K1A3 114 aa13.97□□□□□ -0.17
ATG4D-208ENST00000588667 HSPB8Q9UJY1 196 aa13.97□□□□□ -0.17
ATG4D-208ENST00000588667 DNAH6Q9C0G6 4158 aa13.97□□□□□ -0.17
ATG4D-208ENST00000588667 K7EQD1 137 aa13.97□□□□□ -0.17
ATG4D-208ENST00000588667 FCER1GP30273 86 aa13.97□□□□□ -0.17
ATG4D-208ENST00000588667 A0A096LNJ9 63 aa13.96□□□□□ -0.17
ATG4D-208ENST00000588667 SMIM6P0DI80 62 aa13.96□□□□□ -0.17
ATG4D-208ENST00000588667 NEXN-AS1Q8NBZ9 246 aa13.96□□□□□ -0.17
ATG4D-208ENST00000588667 TRBV6-4A0A1B0GX49 114 aa13.95□□□□□ -0.18
ATG4D-208ENST00000588667 CCL18P55774 89 aa13.95□□□□□ -0.18
ATG4D-208ENST00000588667 MRPL23Q16540 153 aaKnown RBP13.95□□□□□ -0.18
ATG4D-208ENST00000588667 I3L3M4 83 aa13.94□□□□□ -0.18
ATG4D-208ENST00000588667 GYPEP15421 78 aa13.94□□□□□ -0.18
ATG4D-208ENST00000588667 G0S2P27469 103 aa13.94□□□□□ -0.18
ATG4D-208ENST00000588667 KRTDAPP60985 99 aa13.94□□□□□ -0.18
ATG4D-208ENST00000588667 NEGR1Q7Z3B1 354 aa13.94□□□□□ -0.18
ATG4D-208ENST00000588667 SLC25A29Q8N8R3 303 aa13.94□□□□□ -0.18
ATG4D-208ENST00000588667 JOSD1Q15040 202 aaPredicted RBP13.93□□□□□ -0.18
ATG4D-208ENST00000588667 RHOHQ15669 191 aa13.93□□□□□ -0.18
ATG4D-208ENST00000588667 BTF3P20290 206 aaKnown RBP13.93□□□□□ -0.18
ATG4D-208ENST00000588667 RPL36AP83881 106 aaKnown RBP13.93□□□□□ -0.18
ATG4D-208ENST00000588667 RPL36ALQ969Q0 106 aaKnown RBP13.93□□□□□ -0.18
ATG4D-208ENST00000588667 PRADC1Q9BSG0 188 aa13.93□□□□□ -0.18
ATG4D-208ENST00000588667 PYY3Q5JQD4 70 aa13.92□□□□□ -0.18
ATG4D-208ENST00000588667 LINC00588Q9Y4M8 146 aa13.92□□□□□ -0.18
ATG4D-208ENST00000588667 TRBV7-3A0A075B6L6 115 aa13.91□□□□□ -0.18
ATG4D-208ENST00000588667 C3orf79P0CE67 100 aa13.91□□□□□ -0.18
ATG4D-208ENST00000588667 MAP1LC3CQ9BXW4 147 aa13.91□□□□□ -0.18
ATG4D-208ENST00000588667 Q9UF83 564 aa13.91□□□□□ -0.18
ATG4D-208ENST00000588667 ESRGQ1W209 222 aa13.9□□□□□ -0.18
ATG4D-208ENST00000588667 ZNRF2Q8NHG8 242 aa13.9□□□□□ -0.18
ATG4D-208ENST00000588667 LOC100131303A0A0U1RQF7 123 aa13.9□□□□□ -0.19
ATG4D-208ENST00000588667 LINC01549A6NIU2 74 aa13.9□□□□□ -0.19
ATG4D-208ENST00000588667 LINC00173Q6ZV60 143 aa13.9□□□□□ -0.19
ATG4D-208ENST00000588667 SCGB1D1O95968 90 aa13.89□□□□□ -0.19
ATG4D-208ENST00000588667 TSHBP01222 138 aa13.89□□□□□ -0.19
ATG4D-208ENST00000588667 SH2D6Q7Z4S9 175 aa13.89□□□□□ -0.19
ATG4D-208ENST00000588667 LINC00518Q8N0U6 118 aa13.89□□□□□ -0.19
ATG4D-208ENST00000588667 TOMM6Q96B49 74 aa13.88□□□□□ -0.19
ATG4D-208ENST00000588667 ATP5LO75964 103 aa13.87□□□□□ -0.19
ATG4D-208ENST00000588667 C2orf66Q6UXQ4 117 aa13.87□□□□□ -0.19
ATG4D-208ENST00000588667 DAZ4Q86SG3 579 aaKnown RBP13.87□□□□□ -0.19
ATG4D-208ENST00000588667 IFI27L1Q96BM0 104 aa13.87□□□□□ -0.19
ATG4D-208ENST00000588667 C12orf57Q99622 126 aa13.87□□□□□ -0.19
ATG4D-208ENST00000588667 UPK3BQ9BT76 320 aa13.87□□□□□ -0.19
ATG4D-208ENST00000588667 DAZ3Q9NR90 486 aaKnown RBP13.87□□□□□ -0.19
ATG4D-208ENST00000588667 CYSLTR1Q9Y271 337 aa13.87□□□□□ -0.19
ATG4D-208ENST00000588667 MRPS16Q9Y3D3 137 aaKnown RBP13.87□□□□□ -0.19
ATG4D-208ENST00000588667 GAGE12JA6NER3 117 aa13.86□□□□□ -0.19
ATG4D-208ENST00000588667 SYS1-DBNDD2H3BUS1 97 aa13.86□□□□□ -0.19
ATG4D-208ENST00000588667 GAGE1Q13065 139 aa13.86□□□□□ -0.19
ATG4D-208ENST00000588667 GAGE4Q13068 117 aa13.86□□□□□ -0.19
ATG4D-208ENST00000588667 GAGE5Q13069 117 aa13.86□□□□□ -0.19
ATG4D-208ENST00000588667 GAGE13Q4V321 117 aa13.86□□□□□ -0.19
ATG4D-208ENST00000588667 DEFB104AQ8WTQ1 72 aa13.86□□□□□ -0.19
ATG4D-208ENST00000588667 UBE2D3P61077 147 aa13.86□□□□□ -0.19
ATG4D-208ENST00000588667 UBE2D2P62837 147 aa13.86□□□□□ -0.19
ATG4D-208ENST00000588667 COTL1Q14019 142 aa13.86□□□□□ -0.19
ATG4D-208ENST00000588667 LYPD5Q6UWN5 251 aa13.85□□□□□ -0.19
ATG4D-208ENST00000588667 PET117Q6UWS5 81 aa13.85□□□□□ -0.19
ATG4D-208ENST00000588667 C20orf202A1L168 122 aa13.84□□□□□ -0.19
ATG4D-208ENST00000588667 SPATA12Q7Z6I5 190 aa13.84□□□□□ -0.19
ATG4D-208ENST00000588667 SCGB3A1Q96QR1 104 aa13.84□□□□□ -0.19
ATG4D-208ENST00000588667 IGHV3-38A0A0C4DH36 116 aa13.83□□□□□ -0.2
ATG4D-208ENST00000588667 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.83□□□□□ -0.2
ATG4D-208ENST00000588667 LINC00694P0DN24 101 aa13.83□□□□□ -0.2
ATG4D-208ENST00000588667 C20orf203Q8NBC4 194 aa13.82□□□□□ -0.2
ATG4D-208ENST00000588667 H0Y8G0 127 aa13.82□□□□□ -0.2
ATG4D-208ENST00000588667 TIRAPP58753 221 aa13.82□□□□□ -0.2
ATG4D-208ENST00000588667 ERASQ7Z444 233 aa13.82□□□□□ -0.2
ATG4D-208ENST00000588667 Q8N976 141 aa13.82□□□□□ -0.2
ATG4D-208ENST00000588667 Q9H8V8 135 aa13.81□□□□□ -0.2
ATG4D-208ENST00000588667 ATP6V0E2Q8NHE4 81 aa13.8□□□□□ -0.2
ATG4D-208ENST00000588667 PRSS1P07477 247 aa13.79□□□□□ -0.2
ATG4D-208ENST00000588667 RPL39P62891 51 aaKnown RBP13.79□□□□□ -0.2
ATG4D-208ENST00000588667 Q6ZN92 141 aa13.79□□□□□ -0.2
ATG4D-208ENST00000588667 TMEM141Q96I45 108 aa13.79□□□□□ -0.2
ATG4D-208ENST00000588667 GTSF1LQ9H1H1 148 aa13.79□□□□□ -0.2
ATG4D-208ENST00000588667 M0R2N4 97 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms