RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 LGALS9CQ6DKI2 356 aa9.84□□□□□ -0.83
CDK5RAP3-219ENST00000580670 FA2HQ7L5A8 372 aa9.84□□□□□ -0.83
CDK5RAP3-219ENST00000580670 SIVA1O15304 175 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 TNFRSF6BO95407 300 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 PRSS3P2Q8NHM4 247 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 C11orf68Q9H3H3 251 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 A0A096LNJ9 63 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 TRAV8-6A0A0B4J262 113 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 H3BRM9 83 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 M0QY20 66 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 DAD1P61803 113 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 Q6ZSN1 163 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 NRACQ8N912 160 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 RPL39LQ96EH5 51 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 C18orf15Q96N68 181 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 ZMAT4Q9H898 229 aa9.83□□□□□ -0.84
CDK5RAP3-219ENST00000580670 BOD1L2Q8IYS8 172 aa9.82□□□□□ -0.84
CDK5RAP3-219ENST00000580670 B9D2Q9BPU9 175 aa9.82□□□□□ -0.84
CDK5RAP3-219ENST00000580670 TENM3Q9P273 2699 aa9.82□□□□□ -0.84
CDK5RAP3-219ENST00000580670 A0A0J9YWU9 116 aa9.81□□□□□ -0.84
CDK5RAP3-219ENST00000580670 TEX48A0A1B0GUV7 120 aa9.81□□□□□ -0.84
CDK5RAP3-219ENST00000580670 H7C1H1 209 aa9.81□□□□□ -0.84
CDK5RAP3-219ENST00000580670 K7ERU9 68 aa9.81□□□□□ -0.84
CDK5RAP3-219ENST00000580670 CIDEAO60543 219 aa9.81□□□□□ -0.84
CDK5RAP3-219ENST00000580670 PPP1R17O96001 155 aa9.81□□□□□ -0.84
CDK5RAP3-219ENST00000580670 RNF151Q2KHN1 245 aa9.81□□□□□ -0.84
CDK5RAP3-219ENST00000580670 TRGV4A0A0C4DH28 118 aa9.8□□□□□ -0.84
CDK5RAP3-219ENST00000580670 LOC389332A0A1B0GUA5 103 aa9.8□□□□□ -0.84
CDK5RAP3-219ENST00000580670 C9orf118A6NHY6 69 aa9.8□□□□□ -0.84
CDK5RAP3-219ENST00000580670 ERASQ7Z444 233 aa9.8□□□□□ -0.84
CDK5RAP3-219ENST00000580670 MAP1LC3AQ9H492 121 aa9.8□□□□□ -0.84
CDK5RAP3-219ENST00000580670 A6NDN8 102 aa9.8□□□□□ -0.84
CDK5RAP3-219ENST00000580670 P0DMU3 169 aa9.8□□□□□ -0.84
CDK5RAP3-219ENST00000580670 FAM231AP0DMU4 169 aa9.8□□□□□ -0.84
CDK5RAP3-219ENST00000580670 FAM231CP0DMU5 169 aa9.8□□□□□ -0.84
CDK5RAP3-219ENST00000580670 IFI27P40305 119 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-219ENST00000580670 EDA2RQ9HAV5 297 aa9.8□□□□□ -0.84
CDK5RAP3-219ENST00000580670 FHL2Q14192 279 aa9.79□□□□□ -0.84
CDK5RAP3-219ENST00000580670 VPS25Q9BRG1 176 aa9.79□□□□□ -0.84
CDK5RAP3-219ENST00000580670 GAGE10A6NGK3 116 aa9.78□□□□□ -0.84
CDK5RAP3-219ENST00000580670 SUMO2P61956 95 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-219ENST00000580670 HSD52Q0P140 79 aa9.78□□□□□ -0.84
CDK5RAP3-219ENST00000580670 GTF2H5Q6ZYL4 71 aa9.78□□□□□ -0.84
CDK5RAP3-219ENST00000580670 C20orf78Q9BR46 151 aa9.78□□□□□ -0.84
CDK5RAP3-219ENST00000580670 LINC01546A6NGU7 62 aa9.78□□□□□ -0.84
CDK5RAP3-219ENST00000580670 H0Y8G0 127 aa9.78□□□□□ -0.84
CDK5RAP3-219ENST00000580670 K7EQD1 137 aa9.78□□□□□ -0.84
CDK5RAP3-219ENST00000580670 C12orf74Q32Q52 190 aa9.78□□□□□ -0.84
CDK5RAP3-219ENST00000580670 SLC25A29Q8N8R3 303 aa9.78□□□□□ -0.84
CDK5RAP3-219ENST00000580670 TRBV6-5A0A0K0K1A5 114 aa9.77□□□□□ -0.85
CDK5RAP3-219ENST00000580670 ATP5G1P05496 136 aa9.77□□□□□ -0.85
CDK5RAP3-219ENST00000580670 NEXN-AS1Q8NBZ9 246 aa9.77□□□□□ -0.85
CDK5RAP3-219ENST00000580670 Q9UF83 564 aa9.77□□□□□ -0.85
CDK5RAP3-219ENST00000580670 MEGF8Q7Z7M0 2845 aa9.77□□□□□ -0.85
CDK5RAP3-219ENST00000580670 TRBV6-4A0A1B0GX49 114 aa9.76□□□□□ -0.85
CDK5RAP3-219ENST00000580670 PRSS47A8MTI9 375 aa9.76□□□□□ -0.85
CDK5RAP3-219ENST00000580670 HBDP02042 147 aa9.76□□□□□ -0.85
CDK5RAP3-219ENST00000580670 SMIM2Q9BVW6 85 aa9.76□□□□□ -0.85
CDK5RAP3-219ENST00000580670 NXT2Q9NPJ8 142 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-219ENST00000580670 HHLA3Q9XRX5 114 aa9.76□□□□□ -0.85
CDK5RAP3-219ENST00000580670 TNFRSF18Q9Y5U5 241 aa9.76□□□□□ -0.85
CDK5RAP3-219ENST00000580670 TRBV10-1A0A0K0K1A3 114 aa9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 SDHAF1A6NFY7 115 aa9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 K7EP34 96 aa9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 HTN3P15516 51 aa9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 Q8N8P6 123 aa9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 C11orf45Q8TAV5 145 aa9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 DNAJC30Q96LL9 226 aa9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 IGLV2-18A0A075B6J9 118 aa9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 F5H768 121 aa9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 RHOHQ15669 191 aa9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 IFI27L1Q96BM0 104 aa9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 HUWE1Q7Z6Z7 4374 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-219ENST00000580670 NHLRC4P0CG21 123 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-219ENST00000580670 POLR2KP53803 58 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-219ENST00000580670 NANOS2P60321 138 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-219ENST00000580670 RPL32P62910 135 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-219ENST00000580670 NEGR1Q7Z3B1 354 aa9.74□□□□□ -0.85
CDK5RAP3-219ENST00000580670 PRADC1Q9BSG0 188 aa9.74□□□□□ -0.85
CDK5RAP3-219ENST00000580670 PRO0255Q9UI72 69 aa9.74□□□□□ -0.85
CDK5RAP3-219ENST00000580670 VCYO14598 125 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 CRYBA4P53673 196 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 RPL36AP83881 106 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 Q6ZTC4 211 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 OR5A1Q8NGJ0 315 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 ZNRF2Q8NHG8 242 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 RPL36ALQ969Q0 106 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 HIGD1BQ9P298 99 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 TRBV7-3A0A075B6L6 115 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 LOC100131303A0A0U1RQF7 123 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 GAGE12JA6NER3 117 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 GAGE4Q13068 117 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 GAGE5Q13069 117 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 GAGE13Q4V321 117 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 DNAH9Q9NYC9 4486 aa9.73□□□□□ -0.85
CDK5RAP3-219ENST00000580670 TRBV27A0A0K0K1C4 114 aa9.72□□□□□ -0.85
CDK5RAP3-219ENST00000580670 PAX4O43316 350 aa9.72□□□□□ -0.85
CDK5RAP3-219ENST00000580670 DEFB104AQ8WTQ1 72 aa9.72□□□□□ -0.85
CDK5RAP3-219ENST00000580670 A0A0J9YY99 117 aa9.71□□□□□ -0.85
CDK5RAP3-219ENST00000580670 H3BUT2 72 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms