RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	ISOC2	Q96AB3	205 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	TVP23C	Q96ET8	276 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	SFRP2	Q96HF1	295 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	IL36B	Q9NZH7	164 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	IGLV4-60	A0A075B6I1	120 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	IGKV3OR2-268	A0A0C4DH90	116 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158		A0A1B0GVG6	124 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158		L7N2F9	121 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	UBE2L6	O14933	153 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	ZNF80	P51504	273 aa	Predicted RBP	3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	LSM3	P62310	102 aa	Known RBP	3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	CTAG1A	P78358	180 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	NEDD8	Q15843	81 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	ZNF56	Q15929	161 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	IQCJ	Q1A5X6	159 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	SMUG1	Q53HV7	270 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	MIR17HG	Q75NE6	70 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	LINC00304	Q8N9R0	145 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	FAM167A-AS1	Q96KT0	104 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	C2orf48	Q96LS8	159 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	UQCC1	Q9NVA1	299 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	MCUB	Q9NWR8	336 aa		3.43	□□□□□ -1.86
KPNB1-209	ENST00000580158	IGHV1-58	A0A0C4DH39	117 aa		3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158		H3BVH4	76 aa		3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	SFT2D2	O95562	160 aa		3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	TPT1	P13693	172 aa	Known RBP	3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	BCAP31	P51572	246 aa		3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	SEC61G	P60059	68 aa		3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	NCS1	P62166	190 aa		3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	UBE2B	P63146	152 aa		3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	UBE2L3	P68036	154 aa	Known RBP	3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	RPL18A	Q02543	176 aa	Known RBP	3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	RIG	Q13278	110 aa		3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	AP3S1	Q92572	193 aa		3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	LINC00526	Q96FQ7	95 aa		3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158	OTOR	Q9NRC9	128 aa		3.42	□□□□□ -1.86
KPNB1-209	ENST00000580158		A0A087X002	238 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	IGKV3D-20	A0A0C4DH25	116 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	UBE2L5P	A0A1B0GUS4	154 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158		M0R381	172 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	ZNF861P	O60384	105 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	ARMS2	P0C7Q2	107 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	BCL2	P10415	239 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	FGF7	P21781	194 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	VBP1	P61758	197 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	IAH1	Q2TAA2	248 aa	Predicted RBP	3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	GCSAML	Q5JQS6	135 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	SLC25A21	Q9BQT8	299 aa	Predicted RBP	3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	TMEM243	Q9BU79	118 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158		Q9H521	79 aa		3.41	□□□□□ -1.86
KPNB1-209	ENST00000580158	IGLV4-69	A0A075B6H9	119 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	C7orf66	A4D0T2	115 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	FAM74A7	A6NL05	159 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	FABP5P3	A8MUU1	101 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158		B4DEV8	164 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	APOM	O95445	188 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	S100A11	P31949	105 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	FAM74A3	Q4VXF1	159 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	FP248	Q71RG6	208 aa	Predicted RBP	3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	ZFP82	Q8N141	532 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	DEDD2	Q8WXF8	326 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	FAM218A	Q96MZ4	157 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	SDHC	Q99643	169 aa	Predicted RBP	3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	MBD2	Q9UBB5	411 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	FLVCR2	Q9UPI3	526 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	PSG8	Q9UQ74	426 aa		3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158	CHTOP	Q9Y3Y2	248 aa	Known RBP	3.4	□□□□□ -1.87
KPNB1-209	ENST00000580158		A0A087WXM4	84 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158		H3BMQ9	156 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	CST7	O76096	145 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	STAG3L3	P0CL85	134 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	TAS2R45	P59539	299 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	HBG1	P69891	147 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	HBG2	P69892	147 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	PPP1R1A	Q13522	171 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	IL18	Q14116	193 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	KRTAP19-2	Q3LHN2	52 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	KHDC3L	Q587J8	217 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	SAPCD1	Q5SSQ6	148 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	DNLZ	Q5SXM8	178 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	OR5C1	Q8NGR4	320 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	NPCDR1	Q9BY65	106 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	MRPS26	Q9BYN8	205 aa	Known RBP	3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	C11orf1	Q9H5F2	150 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	GSKIP	Q9P0R6	139 aa		3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	SYNE2	Q8WXH0	6885 aa	Known RBP	3.39	□□□□□ -1.87
KPNB1-209	ENST00000580158	C9orf170	A2RU37	121 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	MT3	P25713	68 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	FAU	P35544	74 aa	Known RBP	3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	GNG5	P63218	68 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	FLI1	Q01543	452 aa	Predicted RBP	3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	SS18	Q15532	418 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	ATP6V1F	Q16864	119 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	KRTAP13-3	Q3SY46	172 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	PRNT	Q86SH4	94 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	KRTAP11-1	Q8IUC1	163 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	NUP35	Q8NFH5	326 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	MCFD2	Q8NI22	146 aa		3.38	□□□□□ -1.87
KPNB1-209	ENST00000580158	CAMK2N2	Q96S95	79 aa		3.38	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms