RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 TMA7Q9Y2S6 64 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP3-215ENST00000579780 S100A6P06703 90 aa11.6□□□□□ -0.55
CDK5RAP3-215ENST00000579780 FCER1GP30273 86 aa11.6□□□□□ -0.55
CDK5RAP3-215ENST00000579780 NDUFA6P56556 154 aa11.6□□□□□ -0.55
CDK5RAP3-215ENST00000579780 TIRAPP58753 221 aa11.6□□□□□ -0.55
CDK5RAP3-215ENST00000579780 LAGE3Q14657 143 aa11.6□□□□□ -0.55
CDK5RAP3-215ENST00000579780 WWC2-AS2Q96NR7 200 aa11.6□□□□□ -0.55
CDK5RAP3-215ENST00000579780 HSBP1O75506 76 aa11.59□□□□□ -0.55
CDK5RAP3-215ENST00000579780 NUDT3O95989 172 aa11.59□□□□□ -0.55
CDK5RAP3-215ENST00000579780 IGLL5B9A064 214 aa11.58□□□□□ -0.56
CDK5RAP3-215ENST00000579780 KLK5Q9Y337 293 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-215ENST00000579780 AMTP48728 403 aa11.57□□□□□ -0.56
CDK5RAP3-215ENST00000579780 TCTAP57738 103 aa11.57□□□□□ -0.56
CDK5RAP3-215ENST00000579780 NTM-AS1Q6ZSK4 140 aa11.57□□□□□ -0.56
CDK5RAP3-215ENST00000579780 TRBV25-1A0A075B6N4 114 aa11.56□□□□□ -0.56
CDK5RAP3-215ENST00000579780 TRBV6-8A0A0A6YYG3 113 aa11.56□□□□□ -0.56
CDK5RAP3-215ENST00000579780 IGHV1-24A0A0C4DH33 117 aa11.56□□□□□ -0.56
CDK5RAP3-215ENST00000579780 HBDP02042 147 aa11.56□□□□□ -0.56
CDK5RAP3-215ENST00000579780 G0S2P27469 103 aa11.56□□□□□ -0.56
CDK5RAP3-215ENST00000579780 MUC7Q8TAX7 377 aa11.56□□□□□ -0.56
CDK5RAP3-215ENST00000579780 CHCHD7Q9BUK0 85 aa11.56□□□□□ -0.56
CDK5RAP3-215ENST00000579780 NUPR1O60356 82 aa11.55□□□□□ -0.56
CDK5RAP3-215ENST00000579780 C20orf203Q8NBC4 194 aa11.55□□□□□ -0.56
CDK5RAP3-215ENST00000579780 STARD9Q9P2P6 4700 aa11.54□□□□□ -0.56
CDK5RAP3-215ENST00000579780 A0A096LNJ9 63 aa11.54□□□□□ -0.56
CDK5RAP3-215ENST00000579780 LINC01549A6NIU2 74 aa11.54□□□□□ -0.56
CDK5RAP3-215ENST00000579780 LELP1Q5T871 98 aa11.54□□□□□ -0.56
CDK5RAP3-215ENST00000579780 DEFB104AQ8WTQ1 72 aa11.54□□□□□ -0.56
CDK5RAP3-215ENST00000579780 TMEM243Q9BU79 118 aa11.54□□□□□ -0.56
CDK5RAP3-215ENST00000579780 TGP01266 2768 aa11.53□□□□□ -0.56
CDK5RAP3-215ENST00000579780 C5orf52A6NGY3 159 aa11.53□□□□□ -0.56
CDK5RAP3-215ENST00000579780 LYPD5Q6UWN5 251 aa11.53□□□□□ -0.56
CDK5RAP3-215ENST00000579780 C2orf66Q6UXQ4 117 aa11.53□□□□□ -0.56
CDK5RAP3-215ENST00000579780 HIST3H2BBQ8N257 126 aa11.53□□□□□ -0.56
CDK5RAP3-215ENST00000579780 TMEM18Q96B42 140 aa11.53□□□□□ -0.56
CDK5RAP3-215ENST00000579780 APLNQ9ULZ1 77 aa11.53□□□□□ -0.56
CDK5RAP3-215ENST00000579780 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
CDK5RAP3-215ENST00000579780 H7C423 109 aa11.52□□□□□ -0.57
CDK5RAP3-215ENST00000579780 BTF3P20290 206 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-215ENST00000579780 SNRPEP62304 92 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-215ENST00000579780 PMCHL1Q16048 86 aa11.52□□□□□ -0.57
CDK5RAP3-215ENST00000579780 TOMM6Q96B49 74 aa11.52□□□□□ -0.57
CDK5RAP3-215ENST00000579780 PACRGQ96M98 296 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-215ENST00000579780 PKIAP61925 76 aa11.51□□□□□ -0.57
CDK5RAP3-215ENST00000579780 SMAGPQ0VAQ4 97 aa11.51□□□□□ -0.57
CDK5RAP3-215ENST00000579780 FAM19A2Q8N3H0 131 aa11.51□□□□□ -0.57
CDK5RAP3-215ENST00000579780 PLECQ15149 4684 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-215ENST00000579780 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-215ENST00000579780 IGKV2-29A2NJV5 120 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-215ENST00000579780 UBE2L6O14933 153 aa11.5□□□□□ -0.57
CDK5RAP3-215ENST00000579780 ESRGQ1W209 222 aa11.5□□□□□ -0.57
CDK5RAP3-215ENST00000579780 PDZD11Q5EBL8 140 aa11.5□□□□□ -0.57
CDK5RAP3-215ENST00000579780 ZFAND6Q6FIF0 208 aa11.5□□□□□ -0.57
CDK5RAP3-215ENST00000579780 CSMD3Q7Z407 3707 aa11.5□□□□□ -0.57
CDK5RAP3-215ENST00000579780 S100A2P29034 98 aa11.49□□□□□ -0.57
CDK5RAP3-215ENST00000579780 CCL18P55774 89 aa11.49□□□□□ -0.57
CDK5RAP3-215ENST00000579780 RPL39P62891 51 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-215ENST00000579780 MRPL52Q86TS9 123 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-215ENST00000579780 CHCHD5Q9BSY4 110 aa11.49□□□□□ -0.57
CDK5RAP3-215ENST00000579780 TIMM21Q9BVV7 248 aa11.49□□□□□ -0.57
CDK5RAP3-215ENST00000579780 SPANXA1Q9NS26 97 aa11.49□□□□□ -0.57
CDK5RAP3-215ENST00000579780 MRPS16Q9Y3D3 137 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-215ENST00000579780 TRAV8-6A0A0B4J262 113 aa11.48□□□□□ -0.57
CDK5RAP3-215ENST00000579780 ZNF25P17030 456 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-215ENST00000579780 TIMM17AQ99595 171 aa11.48□□□□□ -0.57
CDK5RAP3-215ENST00000579780 UBE2D4Q9Y2X8 147 aa11.48□□□□□ -0.57
CDK5RAP3-215ENST00000579780 C3orf84H3BNL1 204 aa11.47□□□□□ -0.57
CDK5RAP3-215ENST00000579780 LEPROTL1O95214 131 aa11.47□□□□□ -0.57
CDK5RAP3-215ENST00000579780 NPSP0C0P6 89 aa11.47□□□□□ -0.57
CDK5RAP3-215ENST00000579780 UPK3BQ9BT76 320 aa11.47□□□□□ -0.57
CDK5RAP3-215ENST00000579780 PYGO1Q9Y3Y4 419 aa11.47□□□□□ -0.57
CDK5RAP3-215ENST00000579780 ATP5LO75964 103 aa11.46□□□□□ -0.57
CDK5RAP3-215ENST00000579780 FGF6P10767 208 aa11.46□□□□□ -0.57
CDK5RAP3-215ENST00000579780 GAGE6Q13070 117 aa11.46□□□□□ -0.57
CDK5RAP3-215ENST00000579780 ERASQ7Z444 233 aa11.46□□□□□ -0.57
CDK5RAP3-215ENST00000579780 HIST1H2BLQ99880 126 aa11.46□□□□□ -0.57
CDK5RAP3-215ENST00000579780 HSPB8Q9UJY1 196 aa11.46□□□□□ -0.57
CDK5RAP3-215ENST00000579780 LINC00588Q9Y4M8 146 aa11.46□□□□□ -0.57
CDK5RAP3-215ENST00000579780 CSDC2Q9Y534 153 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-215ENST00000579780 IGIPA6NJ69 53 aa11.45□□□□□ -0.58
CDK5RAP3-215ENST00000579780 IFITM10A6NMD0 228 aa11.45□□□□□ -0.58
CDK5RAP3-215ENST00000579780 TMEM141Q96I45 108 aa11.45□□□□□ -0.58
CDK5RAP3-215ENST00000579780 SCGB3A1Q96QR1 104 aa11.45□□□□□ -0.58
CDK5RAP3-215ENST00000579780 A0A1B0GUV1 79 aa11.44□□□□□ -0.58
CDK5RAP3-215ENST00000579780 MRPS36P82909 103 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP3-215ENST00000579780 AMMECR1LQ6DCA0 310 aa11.44□□□□□ -0.58
CDK5RAP3-215ENST00000579780 WFDC10BQ8IUB3 73 aa11.44□□□□□ -0.58
CDK5RAP3-215ENST00000579780 FABP4P15090 132 aa11.43□□□□□ -0.58
CDK5RAP3-215ENST00000579780 MPV17L2Q567V2 206 aa11.43□□□□□ -0.58
CDK5RAP3-215ENST00000579780 OR5A1Q8NGJ0 315 aa11.43□□□□□ -0.58
CDK5RAP3-215ENST00000579780 IGLV4-3A0A075B6K6 122 aa11.42□□□□□ -0.58
CDK5RAP3-215ENST00000579780 A0A087WX48 190 aa11.42□□□□□ -0.58
CDK5RAP3-215ENST00000579780 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-215ENST00000579780 RBX1P62877 108 aa11.42□□□□□ -0.58
CDK5RAP3-215ENST00000579780 PAPPA-AS1Q5QFB9 102 aa11.42□□□□□ -0.58
CDK5RAP3-215ENST00000579780 CASC10Q5T4H9 136 aa11.42□□□□□ -0.58
CDK5RAP3-215ENST00000579780 UBE2DNLQ8IWF7 75 aa11.42□□□□□ -0.58
CDK5RAP3-215ENST00000579780 IFI27L1Q96BM0 104 aa11.42□□□□□ -0.58
CDK5RAP3-215ENST00000579780 TMEM101Q96IK0 257 aa11.42□□□□□ -0.58
CDK5RAP3-215ENST00000579780 VPS13DQ5THJ4 4388 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms