RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 DEFB131BA0A096LNP1 70 aa9.4□□□□□ -0.9
SRSF1-202ENST00000578430 GYPEP15421 78 aa9.4□□□□□ -0.9
SRSF1-202ENST00000578430 S100A2P29034 98 aa9.4□□□□□ -0.9
SRSF1-202ENST00000578430 FCER1GP30273 86 aa9.4□□□□□ -0.9
SRSF1-202ENST00000578430 COTL1Q14019 142 aa9.4□□□□□ -0.9
SRSF1-202ENST00000578430 HIST3H2BBQ8N257 126 aa9.4□□□□□ -0.9
SRSF1-202ENST00000578430 VSIG2Q96IQ7 327 aa9.4□□□□□ -0.9
SRSF1-202ENST00000578430 Q9UF83 564 aa9.4□□□□□ -0.9
SRSF1-202ENST00000578430 NUPR1O60356 82 aa9.39□□□□□ -0.91
SRSF1-202ENST00000578430 MRPL23Q16540 153 aaKnown RBP9.39□□□□□ -0.91
SRSF1-202ENST00000578430 TMEM18Q96B42 140 aa9.39□□□□□ -0.91
SRSF1-202ENST00000578430 ICOSQ9Y6W8 199 aa9.39□□□□□ -0.91
SRSF1-202ENST00000578430 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
SRSF1-202ENST00000578430 TSHBP01222 138 aa9.38□□□□□ -0.91
SRSF1-202ENST00000578430 AMTP48728 403 aa9.38□□□□□ -0.91
SRSF1-202ENST00000578430 GTSF1LQ9H1H1 148 aa9.38□□□□□ -0.91
SRSF1-202ENST00000578430 IGHV1-24A0A0C4DH33 117 aa9.37□□□□□ -0.91
SRSF1-202ENST00000578430 A0A0J9YY99 117 aa9.37□□□□□ -0.91
SRSF1-202ENST00000578430 NUDT3O95989 172 aa9.37□□□□□ -0.91
SRSF1-202ENST00000578430 HBDP02042 147 aa9.37□□□□□ -0.91
SRSF1-202ENST00000578430 NEGR1Q7Z3B1 354 aa9.37□□□□□ -0.91
SRSF1-202ENST00000578430 ATP6V0E2Q8NHE4 81 aa9.37□□□□□ -0.91
SRSF1-202ENST00000578430 PHLDA1Q8WV24 401 aaPredicted RBP9.37□□□□□ -0.91
SRSF1-202ENST00000578430 IGHV3-38A0A0C4DH36 116 aa9.35□□□□□ -0.91
SRSF1-202ENST00000578430 PDZD11Q5EBL8 140 aa9.35□□□□□ -0.91
SRSF1-202ENST00000578430 FAM19A2Q8N3H0 131 aa9.35□□□□□ -0.91
SRSF1-202ENST00000578430 C15orf53Q8NAA6 179 aa9.35□□□□□ -0.91
SRSF1-202ENST00000578430 HIST1H2BLQ99880 126 aa9.35□□□□□ -0.91
SRSF1-202ENST00000578430 CYSLTR1Q9Y271 337 aa9.35□□□□□ -0.91
SRSF1-202ENST00000578430 A0A096LNJ9 63 aa9.34□□□□□ -0.91
SRSF1-202ENST00000578430 LEPROTL1O95214 131 aa9.34□□□□□ -0.91
SRSF1-202ENST00000578430 BTF3P20290 206 aaKnown RBP9.34□□□□□ -0.91
SRSF1-202ENST00000578430 TIRAPP58753 221 aa9.34□□□□□ -0.91
SRSF1-202ENST00000578430 SMAGPQ0VAQ4 97 aa9.34□□□□□ -0.91
SRSF1-202ENST00000578430 C20orf203Q8NBC4 194 aa9.34□□□□□ -0.91
SRSF1-202ENST00000578430 TOMM6Q96B49 74 aa9.34□□□□□ -0.91
SRSF1-202ENST00000578430 HSPB8Q9UJY1 196 aa9.34□□□□□ -0.91
SRSF1-202ENST00000578430 TRBV25-1A0A075B6N4 114 aa9.33□□□□□ -0.92
SRSF1-202ENST00000578430 A0A096LPF7 62 aa9.33□□□□□ -0.92
SRSF1-202ENST00000578430 FABP4P15090 132 aa9.33□□□□□ -0.92
SRSF1-202ENST00000578430 PMCHL1Q16048 86 aa9.33□□□□□ -0.92
SRSF1-202ENST00000578430 C2orf66Q6UXQ4 117 aa9.33□□□□□ -0.92
SRSF1-202ENST00000578430 STAB2Q8WWQ8 2551 aa9.32□□□□□ -0.92
SRSF1-202ENST00000578430 TRBV6-8A0A0A6YYG3 113 aa9.32□□□□□ -0.92
SRSF1-202ENST00000578430 IFITM10A6NMD0 228 aa9.32□□□□□ -0.92
SRSF1-202ENST00000578430 H7C423 109 aa9.32□□□□□ -0.92
SRSF1-202ENST00000578430 ATP5LO75964 103 aa9.32□□□□□ -0.92
SRSF1-202ENST00000578430 C4orf48Q5BLP8 95 aa9.32□□□□□ -0.92
SRSF1-202ENST00000578430 NTM-AS1Q6ZSK4 140 aa9.32□□□□□ -0.92
SRSF1-202ENST00000578430 TMEM243Q9BU79 118 aa9.32□□□□□ -0.92
SRSF1-202ENST00000578430 CHCHD7Q9BUK0 85 aa9.32□□□□□ -0.92
SRSF1-202ENST00000578430 NPSP0C0P6 89 aa9.31□□□□□ -0.92
SRSF1-202ENST00000578430 LINC00528Q8N1L1 170 aa9.31□□□□□ -0.92
SRSF1-202ENST00000578430 ERASQ7Z444 233 aa9.3□□□□□ -0.92
SRSF1-202ENST00000578430 TMEM141Q96I45 108 aa9.3□□□□□ -0.92
SRSF1-202ENST00000578430 SCGB3A1Q96QR1 104 aa9.3□□□□□ -0.92
SRSF1-202ENST00000578430 TIMM17AQ99595 171 aa9.3□□□□□ -0.92
SRSF1-202ENST00000578430 TIMM21Q9BVV7 248 aa9.3□□□□□ -0.92
SRSF1-202ENST00000578430 SPANXA1Q9NS26 97 aa9.3□□□□□ -0.92
SRSF1-202ENST00000578430 PYGO1Q9Y3Y4 419 aa9.3□□□□□ -0.92
SRSF1-202ENST00000578430 LOC105371267A0A1B0GV96 52 aa9.29□□□□□ -0.92
SRSF1-202ENST00000578430 NUPR2A6NF83 97 aa9.29□□□□□ -0.92
SRSF1-202ENST00000578430 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.29□□□□□ -0.92
SRSF1-202ENST00000578430 PKIAP61925 76 aa9.29□□□□□ -0.92
SRSF1-202ENST00000578430 LELP1Q5T871 98 aa9.29□□□□□ -0.92
SRSF1-202ENST00000578430 CEMP1Q6PRD7 247 aaPredicted RBP9.29□□□□□ -0.92
SRSF1-202ENST00000578430 DEFB104AQ8WTQ1 72 aa9.29□□□□□ -0.92
SRSF1-202ENST00000578430 IFI27L1Q96BM0 104 aa9.29□□□□□ -0.92
SRSF1-202ENST00000578430 IGIPA6NJ69 53 aa9.28□□□□□ -0.92
SRSF1-202ENST00000578430 UBE2L6O14933 153 aa9.28□□□□□ -0.92
SRSF1-202ENST00000578430 TCTAP57738 103 aa9.28□□□□□ -0.92
SRSF1-202ENST00000578430 RPL39P62891 51 aaKnown RBP9.28□□□□□ -0.92
SRSF1-202ENST00000578430 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
SRSF1-202ENST00000578430 LYPD5Q6UWN5 251 aa9.28□□□□□ -0.92
SRSF1-202ENST00000578430 MRPL52Q86TS9 123 aaKnown RBP9.28□□□□□ -0.92
SRSF1-202ENST00000578430 OR10D4PQ8NGN7 298 aa9.28□□□□□ -0.92
SRSF1-202ENST00000578430 MAP1LC3CQ9BXW4 147 aa9.28□□□□□ -0.92
SRSF1-202ENST00000578430 KLK5Q9Y337 293 aaPredicted RBP9.28□□□□□ -0.92
SRSF1-202ENST00000578430 CSDC2Q9Y534 153 aaKnown RBP9.28□□□□□ -0.92
SRSF1-202ENST00000578430 IGLL5B9A064 214 aa9.27□□□□□ -0.93
SRSF1-202ENST00000578430 ZNF25P17030 456 aaPredicted RBP9.27□□□□□ -0.93
SRSF1-202ENST00000578430 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.26□□□□□ -0.93
SRSF1-202ENST00000578430 IGKV2-29A2NJV5 120 aaPredicted RBP9.26□□□□□ -0.93
SRSF1-202ENST00000578430 Q6ZN92 141 aa9.26□□□□□ -0.93
SRSF1-202ENST00000578430 SPATA12Q7Z6I5 190 aa9.26□□□□□ -0.93
SRSF1-202ENST00000578430 CHCHD5Q9BSY4 110 aa9.26□□□□□ -0.93
SRSF1-202ENST00000578430 UBE2D4Q9Y2X8 147 aa9.26□□□□□ -0.93
SRSF1-202ENST00000578430 TRAV8-6A0A0B4J262 113 aa9.25□□□□□ -0.93
SRSF1-202ENST00000578430 C3orf79P0CE67 100 aa9.25□□□□□ -0.93
SRSF1-202ENST00000578430 FGF6P10767 208 aa9.25□□□□□ -0.93
SRSF1-202ENST00000578430 KRTDAPP60985 99 aa9.25□□□□□ -0.93
SRSF1-202ENST00000578430 MRPS36P82909 103 aaKnown RBP9.25□□□□□ -0.93
SRSF1-202ENST00000578430 AMMECR1LQ6DCA0 310 aa9.25□□□□□ -0.93
SRSF1-202ENST00000578430 DGAT2L7PQ6IED9 249 aa9.25□□□□□ -0.93
SRSF1-202ENST00000578430 PET117Q6UWS5 81 aa9.25□□□□□ -0.93
SRSF1-202ENST00000578430 LINC00173Q6ZV60 143 aa9.25□□□□□ -0.93
SRSF1-202ENST00000578430 TMEM101Q96IK0 257 aa9.25□□□□□ -0.93
SRSF1-202ENST00000578430 A0A1B0GUV1 79 aa9.24□□□□□ -0.93
SRSF1-202ENST00000578430 SYS1-DBNDD2H3BUS1 97 aa9.24□□□□□ -0.93
SRSF1-202ENST00000578430 PRSS1P07477 247 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 270.9 ms