RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 NAT8BQ9UHF3 227 aa10.68□□□□□ -0.7
VAPA-204ENST00000577901 IGLV5-52A0A0A0MRZ9 124 aa10.67□□□□□ -0.7
VAPA-204ENST00000577901 RIGQ13278 110 aa10.67□□□□□ -0.7
VAPA-204ENST00000577901 NTM-AS1Q6ZSK4 140 aa10.67□□□□□ -0.7
VAPA-204ENST00000577901 GATD1Q8NB37 220 aa10.67□□□□□ -0.7
VAPA-204ENST00000577901 NUP35Q8NFH5 326 aa10.67□□□□□ -0.7
VAPA-204ENST00000577901 TRAV26-2A0A0B4J265 109 aa10.66□□□□□ -0.7
VAPA-204ENST00000577901 IGHV1-24A0A0C4DH33 117 aa10.66□□□□□ -0.7
VAPA-204ENST00000577901 RMI2Q96E14 147 aa10.66□□□□□ -0.7
VAPA-204ENST00000577901 TMEM70Q9BUB7 260 aa10.66□□□□□ -0.7
VAPA-204ENST00000577901 TMEM191AQ9H0A3 160 aa10.66□□□□□ -0.7
VAPA-204ENST00000577901 KLK12Q9UKR0 248 aa10.66□□□□□ -0.7
VAPA-204ENST00000577901 LRCOL1A6NCL2 159 aa10.65□□□□□ -0.7
VAPA-204ENST00000577901 IQCJQ1A5X6 159 aa10.65□□□□□ -0.7
VAPA-204ENST00000577901 NTN5Q8WTR8 489 aaPredicted RBP10.65□□□□□ -0.7
VAPA-204ENST00000577901 COX11Q9Y6N1 276 aa10.65□□□□□ -0.7
VAPA-204ENST00000577901 SMIM27A0A1W2PRY6 76 aa10.64□□□□□ -0.71
VAPA-204ENST00000577901 Q0VG73 95 aa10.64□□□□□ -0.71
VAPA-204ENST00000577901 UBE2WQ96B02 151 aa10.64□□□□□ -0.71
VAPA-204ENST00000577901 IFITM2Q01629 132 aa10.63□□□□□ -0.71
VAPA-204ENST00000577901 COTL1Q14019 142 aa10.63□□□□□ -0.71
VAPA-204ENST00000577901 MPV17L2Q567V2 206 aa10.63□□□□□ -0.71
VAPA-204ENST00000577901 ATRAIDQ6UW56 229 aa10.63□□□□□ -0.71
VAPA-204ENST00000577901 PPP1R2P9O14990 202 aa10.62□□□□□ -0.71
VAPA-204ENST00000577901 CRPP02741 224 aa10.62□□□□□ -0.71
VAPA-204ENST00000577901 ANGP03950 147 aaKnown RBP10.62□□□□□ -0.71
VAPA-204ENST00000577901 PNRC1Q12796 327 aaPredicted RBP10.62□□□□□ -0.71
VAPA-204ENST00000577901 GAGE6Q13070 117 aa10.62□□□□□ -0.71
VAPA-204ENST00000577901 Q8N814 137 aa10.62□□□□□ -0.71
VAPA-204ENST00000577901 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
VAPA-204ENST00000577901 TMEM243Q9BU79 118 aa10.62□□□□□ -0.71
VAPA-204ENST00000577901 FLG2Q5D862 2391 aaPredicted RBP10.61□□□□□ -0.71
VAPA-204ENST00000577901 A0A1B0GW15 77 aa10.61□□□□□ -0.71
VAPA-204ENST00000577901 RAB4AP20338 218 aa10.61□□□□□ -0.71
VAPA-204ENST00000577901 Q8N976 141 aa10.61□□□□□ -0.71
VAPA-204ENST00000577901 MRAP2Q96G30 205 aa10.61□□□□□ -0.71
VAPA-204ENST00000577901 IGKV2D-24A0A075B6R9 120 aa10.6□□□□□ -0.71
VAPA-204ENST00000577901 UBE2L6O14933 153 aa10.6□□□□□ -0.71
VAPA-204ENST00000577901 AMTP48728 403 aa10.6□□□□□ -0.71
VAPA-204ENST00000577901 RBX1P62877 108 aa10.6□□□□□ -0.71
VAPA-204ENST00000577901 AMN1Q8IY45 258 aa10.6□□□□□ -0.71
VAPA-204ENST00000577901 RNF185Q96GF1 192 aa10.6□□□□□ -0.71
VAPA-204ENST00000577901 TRBV6-5A0A0K0K1A5 114 aa10.59□□□□□ -0.71
VAPA-204ENST00000577901 SDHAF1A6NFY7 115 aa10.59□□□□□ -0.71
VAPA-204ENST00000577901 NCR2O95944 276 aa10.59□□□□□ -0.71
VAPA-204ENST00000577901 S100A8P05109 93 aa10.59□□□□□ -0.71
VAPA-204ENST00000577901 CAMPP49913 170 aa10.59□□□□□ -0.71
VAPA-204ENST00000577901 UQCC3Q6UW78 93 aa10.59□□□□□ -0.71
VAPA-204ENST00000577901 DEFB104AQ8WTQ1 72 aa10.59□□□□□ -0.71
VAPA-204ENST00000577901 ST20Q9HBF5 79 aa10.59□□□□□ -0.71
VAPA-204ENST00000577901 FAM30AQ9NZY2 134 aa10.59□□□□□ -0.71
VAPA-204ENST00000577901 I3L3M4 83 aa10.58□□□□□ -0.72
VAPA-204ENST00000577901 PPP1R17O96001 155 aa10.58□□□□□ -0.72
VAPA-204ENST00000577901 MT-ND4LP03901 98 aa10.58□□□□□ -0.72
VAPA-204ENST00000577901 PMCHP20382 165 aa10.58□□□□□ -0.72
VAPA-204ENST00000577901 ENHOQ6UWT2 76 aa10.58□□□□□ -0.72
VAPA-204ENST00000577901 ANAPC16Q96DE5 110 aa10.58□□□□□ -0.72
VAPA-204ENST00000577901 C1orf43Q9BWL3 253 aa10.58□□□□□ -0.72
VAPA-204ENST00000577901 A0A1B0GUV1 79 aa10.57□□□□□ -0.72
VAPA-204ENST00000577901 MIAQ16674 131 aa10.57□□□□□ -0.72
VAPA-204ENST00000577901 LINC00269Q8N2A0 174 aa10.57□□□□□ -0.72
VAPA-204ENST00000577901 F8W036 122 aa10.56□□□□□ -0.72
VAPA-204ENST00000577901 GAS8-AS1O95177 125 aa10.56□□□□□ -0.72
VAPA-204ENST00000577901 HBBP68871 147 aa10.56□□□□□ -0.72
VAPA-204ENST00000577901 FAM104BQ5XKR9 115 aa10.56□□□□□ -0.72
VAPA-204ENST00000577901 PRR34Q9NV39 138 aa10.56□□□□□ -0.72
VAPA-204ENST00000577901 APCSP02743 223 aa10.55□□□□□ -0.72
VAPA-204ENST00000577901 MRPL54Q6P161 138 aaKnown RBP10.55□□□□□ -0.72
VAPA-204ENST00000577901 BAALCQ8WXS3 180 aa10.55□□□□□ -0.72
VAPA-204ENST00000577901 TMEM218A2RU14 115 aa10.54□□□□□ -0.72
VAPA-204ENST00000577901 LINC00862A6NCI5 91 aa10.54□□□□□ -0.72
VAPA-204ENST00000577901 H7C423 109 aa10.54□□□□□ -0.72
VAPA-204ENST00000577901 PLA2G1BP04054 148 aaKnown RBP10.54□□□□□ -0.72
VAPA-204ENST00000577901 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
VAPA-204ENST00000577901 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
VAPA-204ENST00000577901 TRBV27A0A0K0K1C4 114 aa10.53□□□□□ -0.72
VAPA-204ENST00000577901 SMKR1H3BMG3 65 aa10.53□□□□□ -0.72
VAPA-204ENST00000577901 VCYO14598 125 aa10.53□□□□□ -0.72
VAPA-204ENST00000577901 LECT2O14960 151 aa10.53□□□□□ -0.72
VAPA-204ENST00000577901 CKS2P33552 79 aa10.53□□□□□ -0.72
VAPA-204ENST00000577901 POLR2KP53803 58 aaKnown RBP10.53□□□□□ -0.72
VAPA-204ENST00000577901 REG3AQ06141 175 aa10.53□□□□□ -0.72
VAPA-204ENST00000577901 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
VAPA-204ENST00000577901 AMMECR1LQ6DCA0 310 aa10.53□□□□□ -0.72
VAPA-204ENST00000577901 CLPSL2Q6UWE3 100 aa10.53□□□□□ -0.72
VAPA-204ENST00000577901 C20orf203Q8NBC4 194 aa10.53□□□□□ -0.72
VAPA-204ENST00000577901 HMCN2Q8NDA2 5059 aa10.52□□□□□ -0.72
VAPA-204ENST00000577901 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.73
VAPA-204ENST00000577901 TRAV8-4A0A0B4J246 113 aa10.52□□□□□ -0.73
VAPA-204ENST00000577901 A0A1B0GXF2 115 aa10.52□□□□□ -0.73
VAPA-204ENST00000577901 SUMO2P61956 95 aaKnown RBP10.52□□□□□ -0.73
VAPA-204ENST00000577901 WFDC2Q14508 124 aa10.52□□□□□ -0.73
VAPA-204ENST00000577901 Q6ZSA8 131 aa10.52□□□□□ -0.73
VAPA-204ENST00000577901 TSHBP01222 138 aa10.51□□□□□ -0.73
VAPA-204ENST00000577901 RNASEKQ6P5S7 137 aaKnown RBP10.51□□□□□ -0.73
VAPA-204ENST00000577901 COMMD7Q86VX2 200 aa10.51□□□□□ -0.73
VAPA-204ENST00000577901 LINC00528Q8N1L1 170 aa10.51□□□□□ -0.73
VAPA-204ENST00000577901 NRACQ8N912 160 aa10.51□□□□□ -0.73
VAPA-204ENST00000577901 TMEM242Q9NWH2 141 aa10.51□□□□□ -0.73
VAPA-204ENST00000577901 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms