RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 ANAPC13Q9BS18 74 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 PAXXQ9BUH6 204 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 CTDSP1Q9GZU7 261 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 TMEM242Q9NWH2 141 aa3.86□□□□□ -1.79
SMG6-219ENST00000575663 A0A087WWC5 75 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 TRBV6-1A0A0K0K1D8 114 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 A0A0U1RQV1 116 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 IFITM10A6NMD0 228 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 KLLNB2CW77 178 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 PRAC2D3DTV9 90 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 K7EN84 100 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 MALP21145 153 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 UBE2L3P68036 154 aaKnown RBP3.85□□□□□ -1.79
SMG6-219ENST00000575663 MIR17HGQ75NE6 70 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 FER1L6-AS1Q8NA97 138 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 C5orf17Q8NAS9 161 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 BAALCQ8WXS3 180 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 TMEM18Q96B42 140 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 FXYD5Q96DB9 178 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 MRPL53Q96EL3 112 aaKnown RBP3.85□□□□□ -1.79
SMG6-219ENST00000575663 DERL1Q9BUN8 251 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 SLC25A2Q9BXI2 301 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 MAP1LC3AQ9H492 121 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 OTORQ9NRC9 128 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 LAMTOR2Q9Y2Q5 125 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 FAT4Q6V0I7 4981 aa3.85□□□□□ -1.79
SMG6-219ENST00000575663 TRBV19A0A075B6N1 114 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 IGHV1OR15-1A0A075B7D0 117 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 ZNF727A8MUV8 499 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 B5MCH6 92 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 GGTLC3B5MD39 225 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 J3KT08 172 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 PFN1P07737 140 aaKnown RBP3.84□□□□□ -1.79
SMG6-219ENST00000575663 IGLC2P0DOY2 106 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 RPS10P46783 165 aaKnown RBP3.84□□□□□ -1.79
SMG6-219ENST00000575663 HSD52Q0P140 79 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 FAM162BQ5T6X4 162 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 LELP1Q5T871 98 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 TMEM183AQ8IXX5 376 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 TVP23CQ96ET8 276 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 SMIM7Q9BQ49 75 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 GTSF1LQ9H1H1 148 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 PPDPFQ9H3Y8 114 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 AAMDCQ9H7C9 122 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 RPS10P5Q9NQ39 176 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 NAT8BQ9UHF3 227 aa3.84□□□□□ -1.79
SMG6-219ENST00000575663 TRAV8-1A0A0A6YYK1 113 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 TRAV4A0A0B4J268 109 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 LOC100131303A0A0U1RQF7 123 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 TINCRA0A1B0GVN0 87 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 RBAKDNA6NC62 111 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 GAGE12JA6NER3 117 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 C9JQL5 133 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 H3BQ15 152 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 MRPS12O15235 138 aaKnown RBP3.83□□□□□ -1.8
SMG6-219ENST00000575663 GPX1P07203 203 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 RNASE4P34096 147 aaKnown RBP3.83□□□□□ -1.8
SMG6-219ENST00000575663 CSN1S1P47710 185 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 SRSF3P84103 164 aaKnown RBP3.83□□□□□ -1.8
SMG6-219ENST00000575663 GAGE4Q13068 117 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 C14orf177Q52M58 125 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 CYB561D1Q8N8Q1 229 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 CMTM2Q8TAZ6 248 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 FMC1Q96HJ9 113 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 SGK494Q96LW2 274 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 IMMP2LQ96T52 175 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 HIST1H2BLQ99880 126 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 NDFIP1Q9BT67 221 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 SDF2L1Q9HCN8 221 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 PRO0628Q9UI54 55 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 TP53TG3Q9ULZ0 132 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 EPDR1Q9UM22 224 aa3.83□□□□□ -1.8
SMG6-219ENST00000575663 IGKV2D-24A0A075B6R9 120 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 A0A087WX48 190 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 A0A1B0GV50 99 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 GAGE12HA6NDE8 117 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 PGPA6NDG6 321 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 FABP5P3A8MUU1 101 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 H3BTX0 84 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 NDUFB4O95168 129 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 COX8CQ7Z4L0 72 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 OR5A1Q8NGJ0 315 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 RASL10AQ92737 203 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 LINC00477Q96M19 166 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 PRADC1Q9BSG0 188 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 PARLQ9H300 379 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 UQCR10Q9UDW1 63 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 CYSLTR1Q9Y271 337 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 LENEPQ9Y5L5 61 aa3.82□□□□□ -1.8
SMG6-219ENST00000575663 MUC2Q02817 5179 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 TRGV11A0A075B6L2 103 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 TRAV9-1A0A075B6T8 112 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 C7orf77A4D0Y5 90 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 FAM231BA6NCW3 169 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 USP17L23D6RBM5 183 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.81□□□□□ -1.8
SMG6-219ENST00000575663 PEX7O00628 323 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 TCRAP04437 139 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 PYYP10082 97 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 CRISP2P16562 243 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms