RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 MAP1LC3B2A6NCE7 125 aa5.56□□□□□ -1.52
SMG6-218ENST00000575454 MGPP08493 103 aa5.56□□□□□ -1.52
SMG6-218ENST00000575454 CACNG7P62955 275 aa5.56□□□□□ -1.52
SMG6-218ENST00000575454 AMMECR1LQ6DCA0 310 aa5.56□□□□□ -1.52
SMG6-218ENST00000575454 RPL7L1Q6DKI1 246 aaKnown RBP5.56□□□□□ -1.52
SMG6-218ENST00000575454 SUMO4Q6EEV6 95 aa5.56□□□□□ -1.52
SMG6-218ENST00000575454 CHCHD10Q8WYQ3 142 aaPredicted RBP5.56□□□□□ -1.52
SMG6-218ENST00000575454 MLST8Q9BVC4 326 aa5.56□□□□□ -1.52
SMG6-218ENST00000575454 MAP1LC3BQ9GZQ8 125 aa5.56□□□□□ -1.52
SMG6-218ENST00000575454 NIT2Q9NQR4 276 aa5.56□□□□□ -1.52
SMG6-218ENST00000575454 TRAV26-2A0A0B4J265 109 aa5.55□□□□□ -1.52
SMG6-218ENST00000575454 IGKV3OR2-268A0A0C4DH90 116 aa5.55□□□□□ -1.52
SMG6-218ENST00000575454 RPS20P60866 119 aaKnown RBP5.55□□□□□ -1.52
SMG6-218ENST00000575454 TPPP3Q9BW30 176 aa5.55□□□□□ -1.52
SMG6-218ENST00000575454 IGHV1-58A0A0C4DH39 117 aa5.54□□□□□ -1.52
SMG6-218ENST00000575454 F2Z2F3 143 aa5.54□□□□□ -1.52
SMG6-218ENST00000575454 H7C423 109 aa5.54□□□□□ -1.52
SMG6-218ENST00000575454 PFDN1O60925 122 aa5.54□□□□□ -1.52
SMG6-218ENST00000575454 TRGC1P0CF51 173 aa5.54□□□□□ -1.52
SMG6-218ENST00000575454 IFITM3Q01628 133 aa5.54□□□□□ -1.52
SMG6-218ENST00000575454 CARD19Q96LW7 228 aa5.54□□□□□ -1.52
SMG6-218ENST00000575454 XKRY2A2RUG3 117 aa5.53□□□□□ -1.52
SMG6-218ENST00000575454 PAGE4O60829 102 aa5.53□□□□□ -1.52
SMG6-218ENST00000575454 FOXI1Q12951 378 aa5.53□□□□□ -1.52
SMG6-218ENST00000575454 FER1L6-AS1Q8NA97 138 aa5.53□□□□□ -1.52
SMG6-218ENST00000575454 ISOC2Q96AB3 205 aa5.53□□□□□ -1.52
SMG6-218ENST00000575454 ZNF561-AS1K7EIQ3 104 aa5.52□□□□□ -1.53
SMG6-218ENST00000575454 NCR2O95944 276 aa5.52□□□□□ -1.53
SMG6-218ENST00000575454 MT-ND6P03923 174 aa5.52□□□□□ -1.53
SMG6-218ENST00000575454 IGLC6P0CF74 106 aa5.52□□□□□ -1.53
SMG6-218ENST00000575454 PTTG1IPP53801 180 aa5.52□□□□□ -1.53
SMG6-218ENST00000575454 SYCNQ0VAF6 134 aa5.52□□□□□ -1.53
SMG6-218ENST00000575454 RNASEKQ6P5S7 137 aaKnown RBP5.52□□□□□ -1.53
SMG6-218ENST00000575454 TMUB2Q71RG4 321 aa5.52□□□□□ -1.53
SMG6-218ENST00000575454 LOC107984640A0A0U1RRK4 108 aa5.51□□□□□ -1.53
SMG6-218ENST00000575454 SCO2A0A1W2PP80 73 aa5.51□□□□□ -1.53
SMG6-218ENST00000575454 GIPP09681 153 aaPredicted RBP5.51□□□□□ -1.53
SMG6-218ENST00000575454 ZNF25P17030 456 aaPredicted RBP5.51□□□□□ -1.53
SMG6-218ENST00000575454 XCL1P47992 114 aa5.51□□□□□ -1.53
SMG6-218ENST00000575454 OR2D3Q8NGH3 330 aa5.51□□□□□ -1.53
SMG6-218ENST00000575454 OR5A1Q8NGJ0 315 aa5.51□□□□□ -1.53
SMG6-218ENST00000575454 DIRC1Q969H9 104 aa5.51□□□□□ -1.53
SMG6-218ENST00000575454 TMEM101Q96IK0 257 aa5.51□□□□□ -1.53
SMG6-218ENST00000575454 BTF3L4Q96K17 158 aa5.51□□□□□ -1.53
SMG6-218ENST00000575454 ALG5Q9Y673 324 aa5.51□□□□□ -1.53
SMG6-218ENST00000575454 FXYD6-FXYD2A0A087WZ82 144 aa5.5□□□□□ -1.53
SMG6-218ENST00000575454 APCSP02743 223 aa5.5□□□□□ -1.53
SMG6-218ENST00000575454 FGF6P10767 208 aa5.5□□□□□ -1.53
SMG6-218ENST00000575454 NTF3P20783 257 aa5.5□□□□□ -1.53
SMG6-218ENST00000575454 RPL35P42766 123 aaKnown RBP5.5□□□□□ -1.53
SMG6-218ENST00000575454 GAGE2BQ13066 116 aa5.5□□□□□ -1.53
SMG6-218ENST00000575454 C1orf137Q5JT78 98 aa5.5□□□□□ -1.53
SMG6-218ENST00000575454 TSKUQ8WUA8 353 aa5.5□□□□□ -1.53
SMG6-218ENST00000575454 SFT2D1Q8WV19 159 aa5.5□□□□□ -1.53
SMG6-218ENST00000575454 FAM210AQ96ND0 272 aa5.5□□□□□ -1.53
SMG6-218ENST00000575454 IGLV1-50A0A075B6I6 118 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 LINC00959A0A1B0GUT2 108 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 UMAD1C9J7I0 102 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 CCL25O15444 150 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 IFNA1P01562 189 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 CAMPP49913 170 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 EIF5AP63241 154 aaKnown RBP5.49□□□□□ -1.53
SMG6-218ENST00000575454 SS18Q15532 418 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 Q5BKY6 102 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 EIF5AL1Q6IS14 154 aaKnown RBP5.49□□□□□ -1.53
SMG6-218ENST00000575454 TEX261Q6UWH6 196 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 CD164L2Q6UWJ8 174 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 C9orf62Q8N4C0 152 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 PRR26Q8N8Z3 221 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 MBD3L1Q8WWY6 194 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 BIN3Q9NQY0 253 aa5.49□□□□□ -1.53
SMG6-218ENST00000575454 IGLV4-69A0A075B6H9 119 aa5.48□□□□□ -1.53
SMG6-218ENST00000575454 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.48□□□□□ -1.53
SMG6-218ENST00000575454 A0A1W2PNN7 141 aa5.48□□□□□ -1.53
SMG6-218ENST00000575454 IGKV2-29A2NJV5 120 aaPredicted RBP5.48□□□□□ -1.53
SMG6-218ENST00000575454 APOMO95445 188 aa5.48□□□□□ -1.53
SMG6-218ENST00000575454 PRR4Q16378 134 aa5.48□□□□□ -1.53
SMG6-218ENST00000575454 C9orf116Q5BN46 136 aaPredicted RBP5.48□□□□□ -1.53
SMG6-218ENST00000575454 LYZL1Q6UWQ5 148 aa5.48□□□□□ -1.53
SMG6-218ENST00000575454 KCNRGQ8N5I3 272 aa5.48□□□□□ -1.53
SMG6-218ENST00000575454 SMIM12Q96EX1 92 aa5.48□□□□□ -1.53
SMG6-218ENST00000575454 LINC00526Q96FQ7 95 aa5.48□□□□□ -1.53
SMG6-218ENST00000575454 TRAV1-1A0A0B4J248 108 aa5.47□□□□□ -1.53
SMG6-218ENST00000575454 C19orf71A6NCJ1 209 aa5.47□□□□□ -1.53
SMG6-218ENST00000575454 IGLV7-43P04211 117 aa5.47□□□□□ -1.53
SMG6-218ENST00000575454 MALP21145 153 aa5.47□□□□□ -1.53
SMG6-218ENST00000575454 RPL13AP40429 203 aaKnown RBP5.47□□□□□ -1.53
SMG6-218ENST00000575454 TWIST1Q15672 202 aa5.47□□□□□ -1.53
SMG6-218ENST00000575454 Q6ZNX1 250 aa5.47□□□□□ -1.53
SMG6-218ENST00000575454 SMIM15Q7Z3B0 74 aa5.47□□□□□ -1.53
SMG6-218ENST00000575454 GATD1Q8NB37 220 aa5.47□□□□□ -1.53
SMG6-218ENST00000575454 A0A1B0GV50 99 aa5.46□□□□□ -1.54
SMG6-218ENST00000575454 H0Y9J4 135 aa5.46□□□□□ -1.54
SMG6-218ENST00000575454 I3L3M4 83 aa5.46□□□□□ -1.54
SMG6-218ENST00000575454 PMCHP20382 165 aa5.46□□□□□ -1.54
SMG6-218ENST00000575454 GNG4P50150 75 aa5.46□□□□□ -1.54
SMG6-218ENST00000575454 UBE2D1P51668 147 aa5.46□□□□□ -1.54
SMG6-218ENST00000575454 CENPWQ5EE01 88 aa5.46□□□□□ -1.54
SMG6-218ENST00000575454 FAM213BQ8TBF2 198 aa5.46□□□□□ -1.54
SMG6-218ENST00000575454 C11orf52Q96A22 123 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms