RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 TRBV6-5A0A0K0K1A5 114 aa5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 RNASE4P34096 147 aaKnown RBP5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 XP32Q5T750 250 aa5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 GPHB5Q86YW7 130 aa5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 LY6G5BQ8NDX9 201 aa5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 MPLKIPQ8TAP9 179 aa5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 C14orf132Q9NPU4 83 aa5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 LY6G6EA0A0G2JKS1 128 aa5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 H0YGX0 51 aa5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 CXorf67Q86X51 503 aaPredicted RBP5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 PLA2G2DQ9UNK4 145 aa5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 U3KQA8 63 aa5.83□□□□□ -1.48
TOM1L1-220ENST00000575333 DSCAML1Q8TD84 2053 aa5.82□□□□□ -1.48
TOM1L1-220ENST00000575333 ASXL3Q9C0F0 2248 aa5.82□□□□□ -1.48
TOM1L1-220ENST00000575333 MGPP08493 103 aa5.82□□□□□ -1.48
TOM1L1-220ENST00000575333 APOC4P55056 127 aa5.82□□□□□ -1.48
TOM1L1-220ENST00000575333 UBE2BP63146 152 aa5.82□□□□□ -1.48
TOM1L1-220ENST00000575333 RUSC1-AS1Q66K80 236 aa5.82□□□□□ -1.48
TOM1L1-220ENST00000575333 HIST2H2BCQ6DN03 193 aa5.82□□□□□ -1.48
TOM1L1-220ENST00000575333 HIST2H2BDQ6DRA6 164 aa5.82□□□□□ -1.48
TOM1L1-220ENST00000575333 WDFY3Q8IZQ1 3526 aa5.82□□□□□ -1.48
TOM1L1-220ENST00000575333 NDUFA1O15239 70 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 TFF1P04155 84 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 CD28P10747 220 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 Q0VFX4 171 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 LINC00308Q8TCZ7 52 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 RMI2Q96E14 147 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 UBE2E2Q96LR5 201 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 SEC16AO15027 2179 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 SPTBN2O15020 2390 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 E7EQL1 145 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 IGF1P05019 195 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 ENHOQ6UWT2 76 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 Q6ZSV7 163 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 C6orf223Q8N319 242 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 DEFB127Q9H1M4 99 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 C11orf21Q9P2W6 132 aa5.81□□□□□ -1.48
TOM1L1-220ENST00000575333 ASPMQ8IZT6 3477 aa5.8□□□□□ -1.48
TOM1L1-220ENST00000575333 TRBV7-4A0A0J9YYF1 115 aa5.8□□□□□ -1.48
TOM1L1-220ENST00000575333 F6UB75 175 aa5.8□□□□□ -1.48
TOM1L1-220ENST00000575333 RPL39P62891 51 aaKnown RBP5.8□□□□□ -1.48
TOM1L1-220ENST00000575333 C15orf32Q32M92 178 aa5.8□□□□□ -1.48
TOM1L1-220ENST00000575333 Q6ZVQ6 151 aa5.8□□□□□ -1.48
TOM1L1-220ENST00000575333 PHLDA3Q9Y5J5 127 aa5.8□□□□□ -1.48
TOM1L1-220ENST00000575333 IGHV3-64A0A075B6Q5 118 aa5.79□□□□□ -1.48
TOM1L1-220ENST00000575333 IGHV3-64DA0A0J9YX35 117 aa5.79□□□□□ -1.48
TOM1L1-220ENST00000575333 A0A0J9YXV3 536 aa5.79□□□□□ -1.48
TOM1L1-220ENST00000575333 UBE2L6O14933 153 aa5.79□□□□□ -1.48
TOM1L1-220ENST00000575333 ZNHIT1O43257 154 aa5.79□□□□□ -1.48
TOM1L1-220ENST00000575333 C9orf47Q6ZRZ4 202 aa5.79□□□□□ -1.48
TOM1L1-220ENST00000575333 ZNRF1Q8ND25 227 aa5.79□□□□□ -1.48
TOM1L1-220ENST00000575333 BPESC1Q9GZL8 116 aa5.79□□□□□ -1.48
TOM1L1-220ENST00000575333 AKAP13Q12802 2813 aa5.79□□□□□ -1.48
TOM1L1-220ENST00000575333 IGHV3-21A0A0B4J1V1 117 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 K7EIM0 57 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 S100A4P26447 101 aaKnown RBP5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 MRGPRG-AS1Q2M3A8 158 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 FAM218AQ96MZ4 157 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 SNURFQ9Y675 71 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 NAV3Q8IVL0 2385 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 FREM2Q5SZK8 3169 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 IGLV4-3A0A075B6K6 122 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 TRAV21A0A0B4J279 112 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 BUB1B-PAK6H3BSN5 160 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 FUSP35637 526 aaKnown RBP eCLIP5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 PIK3CD-AS1Q5SR53 167 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 SOSTDC1Q6X4U4 206 aa5.78□□□□□ -1.48
TOM1L1-220ENST00000575333 FRYQ5TBA9 3013 aa5.77□□□□□ -1.49
TOM1L1-220ENST00000575333 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
TOM1L1-220ENST00000575333 CXCL6P80162 114 aa5.77□□□□□ -1.49
TOM1L1-220ENST00000575333 FAM229BQ4G0N7 80 aa5.77□□□□□ -1.49
TOM1L1-220ENST00000575333 C20orf203Q8NBC4 194 aa5.77□□□□□ -1.49
TOM1L1-220ENST00000575333 KRTAP4-6Q9BYQ5 205 aa5.77□□□□□ -1.49
TOM1L1-220ENST00000575333 POLEQ07864 2286 aa5.77□□□□□ -1.49
TOM1L1-220ENST00000575333 CEP295Q9C0D2 2601 aa5.77□□□□□ -1.49
TOM1L1-220ENST00000575333 CACNA1AO00555 2505 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 M0R378 163 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 CRPP02741 224 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 RNF5Q99942 180 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 ORMDL1Q9P0S3 153 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 LINC00588Q9Y4M8 146 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 COL27A1Q8IZC6 1860 aaPredicted RBP5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 FREM1Q5H8C1 2179 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 FOLR3P41439 243 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 PHF5AQ7RTV0 110 aaKnown RBP5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 C11orf45Q8TAV5 145 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 OPRPNQ99935 248 aaPredicted RBP5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 Q9HAA7 133 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 KIF25-AS1Q9Y6Z4 181 aa5.76□□□□□ -1.49
TOM1L1-220ENST00000575333 NCOR2Q9Y618 2525 aa5.75□□□□□ -1.49
TOM1L1-220ENST00000575333 PRYO14603 147 aa5.75□□□□□ -1.49
TOM1L1-220ENST00000575333 C11orf44Q8N8P7 122 aa5.75□□□□□ -1.49
TOM1L1-220ENST00000575333 ZNF625Q96I27 306 aaPredicted RBP5.75□□□□□ -1.49
TOM1L1-220ENST00000575333 CELSR3Q9NYQ7 3312 aa5.75□□□□□ -1.49
TOM1L1-220ENST00000575333 CTSGP08311 255 aa5.74□□□□□ -1.49
TOM1L1-220ENST00000575333 VPREB1P12018 145 aa5.74□□□□□ -1.49
TOM1L1-220ENST00000575333 LINC00315P59091 139 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms