RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 AKAP13Q12802 2813 aa-0.84□□□□□ -2.54
CDC27-216ENST00000574304 M0R129 80 aa-0.85□□□□□ -2.55
CDC27-216ENST00000574304 NCS1P62166 190 aa-0.85□□□□□ -2.55
CDC27-216ENST00000574304 MIC13Q5XKP0 118 aa-0.85□□□□□ -2.55
CDC27-216ENST00000574304 RPL7L1Q6DKI1 246 aaKnown RBP-0.85□□□□□ -2.55
CDC27-216ENST00000574304 C10orf82Q8WW14 230 aa-0.85□□□□□ -2.55
CDC27-216ENST00000574304 SELENOSQ9BQE4 189 aa-0.85□□□□□ -2.55
CDC27-216ENST00000574304 WFDC6Q9BQY6 131 aa-0.85□□□□□ -2.55
CDC27-216ENST00000574304 SPCS1Q9Y6A9 102 aa-0.85□□□□□ -2.55
CDC27-216ENST00000574304 ITPR2Q14571 2701 aa-0.85□□□□□ -2.55
CDC27-216ENST00000574304 IBTKQ9P2D0 1353 aaPredicted RBP-0.85□□□□□ -2.55
CDC27-216ENST00000574304 ANKRD11Q6UB99 2663 aaPredicted RBP-0.86□□□□□ -2.55
CDC27-216ENST00000574304 FAM92AA1XBS5 289 aa-0.86□□□□□ -2.55
CDC27-216ENST00000574304 PIN1P1O15428 100 aa-0.86□□□□□ -2.55
CDC27-216ENST00000574304 CCDC153Q494R4 210 aa-0.86□□□□□ -2.55
CDC27-216ENST00000574304 RPRMQ9NS64 109 aa-0.86□□□□□ -2.55
CDC27-216ENST00000574304 USF3Q68DE3 2245 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 CCDC168Q8NDH2 2452 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 PCNX1Q96RV3 2341 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 ZMYM4Q5VZL5 1548 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 TRBV20-1A0A075B6N2 111 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 FXYD6-FXYD2A0A087WZ82 144 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 APOC4-APOC2K7ER74 178 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 NPFFO15130 113 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 PIRTP0C851 137 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 SMIM6P0DI80 62 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 SPRR2AP35326 72 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 SPANXN1Q5VSR9 72 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 VSTM2AQ8TAG5 236 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 NPVFQ9HCQ7 196 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 CDK5RAP2Q96SN8 1893 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 GCN1Q92616 2671 aaKnown RBP-0.87□□□□□ -2.55
CDC27-216ENST00000574304 BCL9LQ86UU0 1499 aa-0.87□□□□□ -2.55
CDC27-216ENST00000574304 TNRC18O15417 2968 aaPredicted RBP-0.87□□□□□ -2.55
CDC27-216ENST00000574304 TACC2O95359 2948 aa-0.88□□□□□ -2.55
CDC27-216ENST00000574304 SIPA1L3O60292 1781 aaPredicted RBP-0.88□□□□□ -2.55
CDC27-216ENST00000574304 ZNF609O15014 1411 aa-0.88□□□□□ -2.55
CDC27-216ENST00000574304 A6NIN4 97 aa-0.88□□□□□ -2.55
CDC27-216ENST00000574304 LOC730098B7Z3J9 87 aa-0.88□□□□□ -2.55
CDC27-216ENST00000574304 SPRR2EP22531 72 aa-0.88□□□□□ -2.55
CDC27-216ENST00000574304 S100A5P33763 92 aa-0.88□□□□□ -2.55
CDC27-216ENST00000574304 UBE2G1P62253 170 aa-0.88□□□□□ -2.55
CDC27-216ENST00000574304 C9orf116Q5BN46 136 aaPredicted RBP-0.88□□□□□ -2.55
CDC27-216ENST00000574304 LAMA1P25391 3075 aa-0.88□□□□□ -2.55
CDC27-216ENST00000574304 C10orf71Q711Q0 1435 aa-0.89□□□□□ -2.55
CDC27-216ENST00000574304 IFT172Q9UG01 1749 aa-0.89□□□□□ -2.55
CDC27-216ENST00000574304 K7EQZ3 153 aa-0.89□□□□□ -2.55
CDC27-216ENST00000574304 CFAP126Q5VTH2 177 aa-0.89□□□□□ -2.55
CDC27-216ENST00000574304 SCN3BQ9NY72 215 aa-0.89□□□□□ -2.55
CDC27-216ENST00000574304 VPS13DQ5THJ4 4388 aa-0.89□□□□□ -2.55
CDC27-216ENST00000574304 MUC17Q685J3 4493 aa-0.9□□□□□ -2.55
CDC27-216ENST00000574304 GNG14A0A1W2PPG7 69 aa-0.9□□□□□ -2.55
CDC27-216ENST00000574304 CLPSL1A2RUU4 121 aa-0.9□□□□□ -2.55
CDC27-216ENST00000574304 NBEAP1P0C6P0 100 aa-0.9□□□□□ -2.55
CDC27-216ENST00000574304 UBE2D1P51668 147 aa-0.9□□□□□ -2.55
CDC27-216ENST00000574304 FAM236AA0A1B0GUQ0 79 aa-0.91□□□□□ -2.56
CDC27-216ENST00000574304 FAM236BA0A1B0GV22 79 aa-0.91□□□□□ -2.56
CDC27-216ENST00000574304 H0YJX3 145 aa-0.91□□□□□ -2.56
CDC27-216ENST00000574304 DBIP07108 87 aaKnown RBP-0.91□□□□□ -2.56
CDC27-216ENST00000574304 NEFHP12036 1026 aa-0.91□□□□□ -2.56
CDC27-216ENST00000574304 MMGT1Q8N4V1 131 aa-0.91□□□□□ -2.56
CDC27-216ENST00000574304 SAR1AQ9NR31 198 aa-0.91□□□□□ -2.56
CDC27-216ENST00000574304 SPANXCQ9NY87 97 aa-0.91□□□□□ -2.56
CDC27-216ENST00000574304 ITPR1Q14643 2758 aa-0.91□□□□□ -2.56
CDC27-216ENST00000574304 DNAJC13O75165 2243 aa-0.92□□□□□ -2.56
CDC27-216ENST00000574304 S100A3P33764 101 aa-0.92□□□□□ -2.56
CDC27-216ENST00000574304 DCDP81605 110 aaKnown RBP-0.92□□□□□ -2.56
CDC27-216ENST00000574304 BAGE3Q86Y29 109 aa-0.92□□□□□ -2.56
CDC27-216ENST00000574304 SPTSSBQ8NFR3 76 aa-0.92□□□□□ -2.56
CDC27-216ENST00000574304 MYO7BQ6PIF6 2116 aa-0.92□□□□□ -2.56
CDC27-216ENST00000574304 HAMPP81172 84 aa-0.93□□□□□ -2.56
CDC27-216ENST00000574304 KLK9Q2XQG4 91 aa-0.93□□□□□ -2.56
CDC27-216ENST00000574304 ERCC6L2Q5T890 1561 aa-0.93□□□□□ -2.56
CDC27-216ENST00000574304 DNAH3Q8TD57 4116 aa-0.93□□□□□ -2.56
CDC27-216ENST00000574304 MYH6P13533 1939 aa-0.93□□□□□ -2.56
CDC27-216ENST00000574304 MTORP42345 2549 aa-0.93□□□□□ -2.56
CDC27-216ENST00000574304 BCE1O60756 84 aa-0.94□□□□□ -2.56
CDC27-216ENST00000574304 IFNA17P01571 189 aa-0.94□□□□□ -2.56
CDC27-216ENST00000574304 IGLC6P0CF74 106 aa-0.94□□□□□ -2.56
CDC27-216ENST00000574304 Q5VV11 94 aa-0.94□□□□□ -2.56
CDC27-216ENST00000574304 CTAGE3PQ8IX95 158 aa-0.94□□□□□ -2.56
CDC27-216ENST00000574304 TP53AIP1Q9HCN2 124 aa-0.94□□□□□ -2.56
CDC27-216ENST00000574304 SPANXA1Q9NS26 97 aa-0.94□□□□□ -2.56
CDC27-216ENST00000574304 SPG11Q96JI7 2443 aa-0.94□□□□□ -2.56
CDC27-216ENST00000574304 LRP6O75581 1613 aa-0.94□□□□□ -2.56
CDC27-216ENST00000574304 PKHD1L1Q86WI1 4243 aa-0.94□□□□□ -2.56
CDC27-216ENST00000574304 ARHGEF10O15013 1369 aa-0.95□□□□□ -2.56
CDC27-216ENST00000574304 PLECQ15149 4684 aaKnown RBP-0.95□□□□□ -2.56
CDC27-216ENST00000574304 HTTP42858 3142 aa-0.95□□□□□ -2.56
CDC27-216ENST00000574304 LRRC37A3O60309 1634 aa-0.95□□□□□ -2.56
CDC27-216ENST00000574304 HIST1H1AQ02539 215 aaPredicted RBP-0.95□□□□□ -2.56
CDC27-216ENST00000574304 KRTAP19-6Q3LI70 58 aa-0.95□□□□□ -2.56
CDC27-216ENST00000574304 MORN2Q502X0 79 aa-0.95□□□□□ -2.56
CDC27-216ENST00000574304 S100A7L2Q5SY68 101 aa-0.95□□□□□ -2.56
CDC27-216ENST00000574304 PSMG3Q9BT73 122 aaPredicted RBP-0.95□□□□□ -2.56
CDC27-216ENST00000574304 PLXNB2O15031 1838 aa-0.95□□□□□ -2.56
CDC27-216ENST00000574304 WNK3Q9BYP7 1800 aa-0.95□□□□□ -2.56
CDC27-216ENST00000574304 LAMC1P11047 1609 aa-0.96□□□□□ -2.56
CDC27-216ENST00000574304 DNAH2Q9P225 4427 aa-0.96□□□□□ -2.56
CDC27-216ENST00000574304 M0R2T5 61 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms