RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 CNFNQ9BYD5 112 aa7.35□□□□□ -1.23
RPAIN-214ENST00000574003 NIT2Q9NQR4 276 aa7.35□□□□□ -1.23
RPAIN-214ENST00000574003 GATCO43716 136 aaKnown RBP7.34□□□□□ -1.23
RPAIN-214ENST00000574003 GAS8-AS1O95177 125 aa7.34□□□□□ -1.23
RPAIN-214ENST00000574003 REG3AQ06141 175 aa7.34□□□□□ -1.23
RPAIN-214ENST00000574003 WDR73Q6P4I2 378 aa7.34□□□□□ -1.23
RPAIN-214ENST00000574003 CIRBP-AS1Q8TBR5 109 aa7.34□□□□□ -1.23
RPAIN-214ENST00000574003 TMEM250H0YL14 139 aa7.33□□□□□ -1.24
RPAIN-214ENST00000574003 AMTP48728 403 aa7.33□□□□□ -1.24
RPAIN-214ENST00000574003 PKIAP61925 76 aa7.33□□□□□ -1.24
RPAIN-214ENST00000574003 CHAC1Q9BUX1 264 aa7.33□□□□□ -1.24
RPAIN-214ENST00000574003 IGKV3OR2-268A0A0C4DH90 116 aa7.32□□□□□ -1.24
RPAIN-214ENST00000574003 COTL1Q14019 142 aa7.32□□□□□ -1.24
RPAIN-214ENST00000574003 C14orf177Q52M58 125 aa7.32□□□□□ -1.24
RPAIN-214ENST00000574003 EIF5A2Q9GZV4 153 aaKnown RBP7.32□□□□□ -1.24
RPAIN-214ENST00000574003 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.31□□□□□ -1.24
RPAIN-214ENST00000574003 IGKV2-29A2NJV5 120 aaPredicted RBP7.31□□□□□ -1.24
RPAIN-214ENST00000574003 PANO1I0J062 215 aa7.31□□□□□ -1.24
RPAIN-214ENST00000574003 UBE2L6O14933 153 aa7.31□□□□□ -1.24
RPAIN-214ENST00000574003 SRP19P09132 144 aaKnown RBP7.31□□□□□ -1.24
RPAIN-214ENST00000574003 SMIM7Q9BQ49 75 aa7.31□□□□□ -1.24
RPAIN-214ENST00000574003 PKHD1L1Q86WI1 4243 aa7.3□□□□□ -1.24
RPAIN-214ENST00000574003 A0A1B0GUV1 79 aa7.3□□□□□ -1.24
RPAIN-214ENST00000574003 A8MWL6 223 aa7.3□□□□□ -1.24
RPAIN-214ENST00000574003 PLA2G1BP04054 148 aaKnown RBP7.3□□□□□ -1.24
RPAIN-214ENST00000574003 KRTAP10-4P60372 401 aaPredicted RBP7.3□□□□□ -1.24
RPAIN-214ENST00000574003 FAM231DQ6ZW35 169 aa7.3□□□□□ -1.24
RPAIN-214ENST00000574003 LINC01551Q86U37 167 aa7.3□□□□□ -1.24
RPAIN-214ENST00000574003 FAM210AQ96ND0 272 aa7.3□□□□□ -1.24
RPAIN-214ENST00000574003 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.3□□□□□ -1.24
RPAIN-214ENST00000574003 ZNF727A8MUV8 499 aa7.29□□□□□ -1.24
RPAIN-214ENST00000574003 C9JQL5 133 aa7.29□□□□□ -1.24
RPAIN-214ENST00000574003 SLPIP03973 132 aa7.29□□□□□ -1.24
RPAIN-214ENST00000574003 SMIM15Q7Z3B0 74 aa7.29□□□□□ -1.24
RPAIN-214ENST00000574003 LRP1Q07954 4544 aaKnown RBP7.28□□□□□ -1.24
RPAIN-214ENST00000574003 hDV102S1A0JD36 115 aa7.28□□□□□ -1.24
RPAIN-214ENST00000574003 FAM231BA6NCW3 169 aa7.28□□□□□ -1.24
RPAIN-214ENST00000574003 GAGE12HA6NDE8 117 aa7.28□□□□□ -1.24
RPAIN-214ENST00000574003 SDHAF1A6NFY7 115 aa7.28□□□□□ -1.24
RPAIN-214ENST00000574003 HIGD1CA8MV81 97 aa7.28□□□□□ -1.24
RPAIN-214ENST00000574003 RPS10P46783 165 aaKnown RBP7.28□□□□□ -1.24
RPAIN-214ENST00000574003 SRSF3P84103 164 aaKnown RBP7.28□□□□□ -1.24
RPAIN-214ENST00000574003 RNASEKQ6P5S7 137 aaKnown RBP7.28□□□□□ -1.24
RPAIN-214ENST00000574003 C9orf163Q8N9P6 203 aa7.28□□□□□ -1.24
RPAIN-214ENST00000574003 RNF185Q96GF1 192 aa7.28□□□□□ -1.24
RPAIN-214ENST00000574003 SMKR1H3BMG3 65 aa7.27□□□□□ -1.25
RPAIN-214ENST00000574003 APCSP02743 223 aa7.27□□□□□ -1.25
RPAIN-214ENST00000574003 CT83Q5H943 113 aa7.27□□□□□ -1.25
RPAIN-214ENST00000574003 TSKUQ8WUA8 353 aa7.27□□□□□ -1.25
RPAIN-214ENST00000574003 TMEM242Q9NWH2 141 aa7.27□□□□□ -1.25
RPAIN-214ENST00000574003 V9GYV3 84 aa7.27□□□□□ -1.25
RPAIN-214ENST00000574003 TRAV8-4A0A0B4J246 113 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 A0A1B0GUT8 65 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 NCR2O95944 276 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 CHTF8P0CG12 524 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 FGF6P10767 208 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 PMCHP20382 165 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 AMMECR1LQ6DCA0 310 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 DGAT2L7PQ6IED9 249 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 SDIM1Q6ZPB5 146 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 AMN1Q8IY45 258 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 C15orf56Q8N910 161 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 OSTCQ9NRP0 149 aa7.26□□□□□ -1.25
RPAIN-214ENST00000574003 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
RPAIN-214ENST00000574003 I3L3M4 83 aa7.25□□□□□ -1.25
RPAIN-214ENST00000574003 J3QL48 77 aa7.25□□□□□ -1.25
RPAIN-214ENST00000574003 TSHBP01222 138 aa7.25□□□□□ -1.25
RPAIN-214ENST00000574003 RAB4AP20338 218 aa7.25□□□□□ -1.25
RPAIN-214ENST00000574003 HNRNPA3P51991 378 aaKnown RBP7.25□□□□□ -1.25
RPAIN-214ENST00000574003 RPL23P62829 140 aaKnown RBP7.25□□□□□ -1.25
RPAIN-214ENST00000574003 HIGD2BQ4VC39 106 aa7.25□□□□□ -1.25
RPAIN-214ENST00000574003 NUP35Q8NFH5 326 aa7.25□□□□□ -1.25
RPAIN-214ENST00000574003 CHCHD10Q8WYQ3 142 aaPredicted RBP7.25□□□□□ -1.25
RPAIN-214ENST00000574003 ISOC2Q96AB3 205 aa7.25□□□□□ -1.25
RPAIN-214ENST00000574003 BORCS7Q96B45 105 aa7.25□□□□□ -1.25
RPAIN-214ENST00000574003 TRBV6-5A0A0K0K1A5 114 aa7.24□□□□□ -1.25
RPAIN-214ENST00000574003 ADIRFQ15847 76 aa7.24□□□□□ -1.25
RPAIN-214ENST00000574003 CLRN3Q8NCR9 226 aa7.24□□□□□ -1.25
RPAIN-214ENST00000574003 TMEM191AQ9H0A3 160 aa7.24□□□□□ -1.25
RPAIN-214ENST00000574003 ST20Q9HBF5 79 aa7.24□□□□□ -1.25
RPAIN-214ENST00000574003 ESDP10768 282 aa7.23□□□□□ -1.25
RPAIN-214ENST00000574003 POLR2KP53803 58 aaKnown RBP7.23□□□□□ -1.25
RPAIN-214ENST00000574003 RPL37AP61513 92 aaKnown RBP7.23□□□□□ -1.25
RPAIN-214ENST00000574003 CNBPP62633 177 aaKnown RBP7.23□□□□□ -1.25
RPAIN-214ENST00000574003 TMEM241Q24JQ0 296 aa7.23□□□□□ -1.25
RPAIN-214ENST00000574003 TEX261Q6UWH6 196 aa7.23□□□□□ -1.25
RPAIN-214ENST00000574003 LINC00526Q96FQ7 95 aa7.23□□□□□ -1.25
RPAIN-214ENST00000574003 AP5S1Q9NUS5 200 aa7.23□□□□□ -1.25
RPAIN-214ENST00000574003 NDUFS6O75380 124 aaKnown RBP7.22□□□□□ -1.25
RPAIN-214ENST00000574003 RIGQ13278 110 aa7.22□□□□□ -1.25
RPAIN-214ENST00000574003 IGHV3-64A0A075B6Q5 118 aa7.21□□□□□ -1.26
RPAIN-214ENST00000574003 H7C423 109 aa7.21□□□□□ -1.26
RPAIN-214ENST00000574003 XCL1P47992 114 aa7.21□□□□□ -1.26
RPAIN-214ENST00000574003 FOXI1Q12951 378 aa7.21□□□□□ -1.26
RPAIN-214ENST00000574003 RNASE13Q5GAN3 156 aaKnown RBP7.21□□□□□ -1.26
RPAIN-214ENST00000574003 NRACQ8N912 160 aa7.21□□□□□ -1.26
RPAIN-214ENST00000574003 A0A087WYN8 130 aa7.2□□□□□ -1.26
RPAIN-214ENST00000574003 LINC00959A0A1B0GUT2 108 aa7.2□□□□□ -1.26
RPAIN-214ENST00000574003 KRTAP29-1A8MX34 341 aaPredicted RBP7.2□□□□□ -1.26
RPAIN-214ENST00000574003 CCL25O15444 150 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms