RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 FAM231CP0DMU5 169 aa6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 RPL32P62910 135 aaKnown RBP6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 RPL36AP83881 106 aaKnown RBP6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 C12orf74Q32Q52 190 aa6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 RNASEKQ6P5S7 137 aaKnown RBP6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 Q8N8P6 123 aa6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 SLC25A29Q8N8R3 303 aa6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 C11orf45Q8TAV5 145 aa6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 RPL36ALQ969Q0 106 aaKnown RBP6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 CHCHD1Q96BP2 118 aaKnown RBP6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 PRO0255Q9UI72 69 aa6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 TNFRSF18Q9Y5U5 241 aa6.03□□□□□ -1.44
KLHDC4-220ENST00000568338 TRBV7-3A0A075B6L6 115 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 K7EMI3 77 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 LINC00614P0C842 121 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 HOXA5P20719 270 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 IFI27P40305 119 aaPredicted RBP6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 CRYBA4P53673 196 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 LINC00336Q6ZUF6 198 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 NIT1Q86X76 327 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 NEXN-AS1Q8NBZ9 246 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 KIR2DL4Q99706 377 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 TMEM70Q9BUB7 260 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 AP5S1Q9NUS5 200 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 HHLA3Q9XRX5 114 aa6.02□□□□□ -1.45
KLHDC4-220ENST00000568338 IGLV2-18A0A075B6J9 118 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 TRBV27A0A0K0K1C4 114 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 C5orf52A6NGY3 159 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 F5H768 121 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 VCYO14598 125 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 TCAPO15273 167 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 HSBP1O75506 76 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 ESDP10768 282 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 HTN3P15516 51 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 POLR2KP53803 58 aaKnown RBP6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 LINC00310P59036 64 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 SNRPEP62304 92 aaKnown RBP6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 Q6ZTC4 211 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 ZNRF2Q8NHG8 242 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 URB1-AS1Q96HZ7 61 aa6.01□□□□□ -1.45
KLHDC4-220ENST00000568338 DNAH10Q8IVF4 4471 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 KMT2AQ03164 3969 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 GAGE12JA6NER3 117 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 LINC01546A6NGU7 62 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 I3L3M4 83 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 S100A2P29034 98 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 FCER1GP30273 86 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 NANOS2P60321 138 aaKnown RBP6□□□□□ -1.45
KLHDC4-220ENST00000568338 GAGE1Q13065 139 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 GAGE4Q13068 117 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 GAGE5Q13069 117 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 GAGE13Q4V321 117 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 ORMDL2Q53FV1 153 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 NEGR1Q7Z3B1 354 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 DAZ4Q86SG3 579 aaKnown RBP6□□□□□ -1.45
KLHDC4-220ENST00000568338 HIST3H2BBQ8N257 126 aa6□□□□□ -1.45
KLHDC4-220ENST00000568338 DAZ3Q9NR90 486 aaKnown RBP6□□□□□ -1.45
KLHDC4-220ENST00000568338 TRAV26-1A0A087WT03 109 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 LOC100131303A0A0U1RQF7 123 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 NUPR1O60356 82 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 LINC00694P0DN24 101 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 GYPEP15421 78 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 AMTP48728 403 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 UBE2D3P61077 147 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 UBE2D2P62837 147 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 LAGE3Q14657 143 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 PDZD11Q5EBL8 140 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 TMEM18Q96B42 140 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 Q9UF83 564 aa5.99□□□□□ -1.45
KLHDC4-220ENST00000568338 DEFB131BA0A096LNP1 70 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 TRAV10A0A0B4J240 114 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 IGHV1-24A0A0C4DH33 117 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 A0A0J9YY99 117 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 A0A1B0GVY2 172 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 H3BNG1 76 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 TSHBP01222 138 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 HBDP02042 147 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 G0S2P27469 103 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 COTL1Q14019 142 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 PHLDA1Q8WV24 401 aaPredicted RBP5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 VSIG2Q96IQ7 327 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 ICOSQ9Y6W8 199 aa5.98□□□□□ -1.45
KLHDC4-220ENST00000568338 IGHV3-38A0A0C4DH36 116 aa5.97□□□□□ -1.45
KLHDC4-220ENST00000568338 NUDT3O95989 172 aa5.97□□□□□ -1.45
KLHDC4-220ENST00000568338 PMCHL1Q16048 86 aa5.97□□□□□ -1.45
KLHDC4-220ENST00000568338 MRPL23Q16540 153 aaKnown RBP5.97□□□□□ -1.45
KLHDC4-220ENST00000568338 TMEM97Q5BJF2 176 aa5.97□□□□□ -1.45
KLHDC4-220ENST00000568338 SH2D6Q7Z4S9 175 aa5.97□□□□□ -1.45
KLHDC4-220ENST00000568338 FAM19A2Q8N3H0 131 aa5.97□□□□□ -1.45
KLHDC4-220ENST00000568338 ATP6V0E2Q8NHE4 81 aa5.97□□□□□ -1.45
KLHDC4-220ENST00000568338 PACRGQ96M98 296 aaPredicted RBP5.97□□□□□ -1.45
KLHDC4-220ENST00000568338 A0A096LNJ9 63 aa5.96□□□□□ -1.46
KLHDC4-220ENST00000568338 PRSS29PA6NIE9 313 aa5.96□□□□□ -1.46
KLHDC4-220ENST00000568338 LINC01549A6NIU2 74 aa5.96□□□□□ -1.46
KLHDC4-220ENST00000568338 FABP4P15090 132 aa5.96□□□□□ -1.46
KLHDC4-220ENST00000568338 BTF3P20290 206 aaKnown RBP5.96□□□□□ -1.46
KLHDC4-220ENST00000568338 HIST1H2BLQ99880 126 aa5.96□□□□□ -1.46
KLHDC4-220ENST00000568338 GTSF1LQ9H1H1 148 aa5.96□□□□□ -1.46
KLHDC4-220ENST00000568338 CYSLTR1Q9Y271 337 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms