RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 C18orf15Q96N68 181 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 KIR2DL4Q99706 377 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 CSTL1Q9H114 145 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 HHLA3Q9XRX5 114 aa3.89□□□□□ -1.79
CAPN3-217ENST00000567817 CMYA5Q8N3K9 4069 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 IGHV3-49A0A0A0MS15 119 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 TRBV6-5A0A0K0K1A5 114 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 OR11H12B2RN74 326 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 K7EP34 96 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 VCYO14598 125 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 FABP2P12104 132 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 CDKN1BP46527 198 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 LY6EQ16553 131 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 NFE4Q86UQ8 179 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 OR11H1Q8NG94 326 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 OR11H2Q8NH07 326 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 DCANP1Q8TF63 244 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 UBE2E2Q96LR5 201 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 SCGB3A1Q96QR1 104 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 TIMM17AQ99595 171 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 MCRIP2Q9BUT9 160 aaKnown RBP3.88□□□□□ -1.79
CAPN3-217ENST00000567817 CHAC1Q9BUX1 264 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 VPREB3Q9UKI3 123 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 CYSLTR1Q9Y271 337 aa3.88□□□□□ -1.79
CAPN3-217ENST00000567817 CHTOPQ9Y3Y2 248 aaKnown RBP3.88□□□□□ -1.79
CAPN3-217ENST00000567817 IGHV3OR16-10A0A075B7F0 116 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 E9PLD3 99 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 C3orf84H3BNL1 204 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 NDUFA7O95182 113 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 TRBV12-3P01733 135 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 IGHV3-11P01762 117 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 LGALS1P09382 135 aaKnown RBP3.87□□□□□ -1.79
CAPN3-217ENST00000567817 RNASE3P12724 160 aaKnown RBP3.87□□□□□ -1.79
CAPN3-217ENST00000567817 RNASE4P34096 147 aaKnown RBP3.87□□□□□ -1.79
CAPN3-217ENST00000567817 BLCAPP62952 87 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 RHOHQ15669 191 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 PRR9Q5T870 116 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 LYRM7Q5U5X0 104 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 AMMECR1LQ6DCA0 310 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 C2orf66Q6UXQ4 117 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 FOXI2Q6ZQN5 318 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 PCP2Q8IVA1 136 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 CEND1Q8N111 149 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 C14orf178Q8N769 122 aaPredicted RBP3.87□□□□□ -1.79
CAPN3-217ENST00000567817 EDA2RQ9HAV5 297 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 MRPL35Q9NZE8 188 aaKnown RBP3.87□□□□□ -1.79
CAPN3-217ENST00000567817 LINC00527Q9UJ94 153 aa3.87□□□□□ -1.79
CAPN3-217ENST00000567817 TRBV25-1A0A075B6N4 114 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 TRBV27A0A0K0K1C4 114 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 MYMXA0A1B0GTQ4 84 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 A0A1W2PPM0 123 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 J3QR89 54 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 K7EQG2 157 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 MGPP08493 103 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 GATA1P15976 413 aaPredicted RBP3.86□□□□□ -1.79
CAPN3-217ENST00000567817 CRYBA4P53673 196 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 PMVKQ15126 192 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 UFSP1Q6NVU6 142 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 TRPT1Q86TN4 253 aaKnown RBP3.86□□□□□ -1.79
CAPN3-217ENST00000567817 TMEM86BQ8N661 226 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 RASL10AQ92737 203 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 PTH2Q96A98 100 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 C9orf85Q96MD7 179 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 CST9LQ9H4G1 147 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 ZNF256Q9Y2P7 627 aaPredicted RBP3.86□□□□□ -1.79
CAPN3-217ENST00000567817 SPCS1Q9Y6A9 102 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 KIF25-AS1Q9Y6Z4 181 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 NOTCH3Q9UM47 2321 aa3.86□□□□□ -1.79
CAPN3-217ENST00000567817 IGHV1OR15-1A0A075B7D0 117 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 TRAV8-6A0A0B4J262 113 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 TRAV26-2A0A0B4J265 109 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 IGHV3-16A0A0C4DH30 117 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 A0A0J9YX75 114 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 A0A1B0GWB2 263 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 H3BUT2 72 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 GAS8-AS1O95177 125 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 CD7P09564 240 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 POLR2KP53803 58 aaKnown RBP3.85□□□□□ -1.79
CAPN3-217ENST00000567817 FXYD7P58549 80 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 DEFB112Q30KQ8 113 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 NSUN5P1Q3KNT7 163 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 OCIAD2Q56VL3 154 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 GTSCR1Q86UQ5 136 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 Q8N2B8 174 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 BAALCQ8WXS3 180 aa3.85□□□□□ -1.79
CAPN3-217ENST00000567817 IGKV2D-26A0A0A0MRZ7 120 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 IGIPA6NJ69 53 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 C11orf86A6NJI1 115 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 A8MWV9 139 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 F8W1H4 67 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 J3KRW8 73 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 GNRH2O43555 120 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 IGHV4-59P01825 116 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 PRB4P10163 310 aaPredicted RBP3.84□□□□□ -1.79
CAPN3-217ENST00000567817 LINC00315P59091 139 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 RBX1P62877 108 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 GAGE5Q13069 117 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 GAGE6Q13070 117 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 ZFP2Q6ZN57 461 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms