RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 SLC25A29Q8N8R3 303 aa7.73□□□□□ -1.17
VPS9D1-206ENST00000567379 ZNRF2Q8NHG8 242 aa7.73□□□□□ -1.17
VPS9D1-206ENST00000567379 DEFB104AQ8WTQ1 72 aa7.73□□□□□ -1.17
VPS9D1-206ENST00000567379 TMEM141Q96I45 108 aa7.73□□□□□ -1.17
VPS9D1-206ENST00000567379 PMCHL2Q9BQD1 86 aa7.73□□□□□ -1.17
VPS9D1-206ENST00000567379 TRAV12-1A0A0B4J245 112 aa7.72□□□□□ -1.17
VPS9D1-206ENST00000567379 FHL2Q14192 279 aa7.72□□□□□ -1.17
VPS9D1-206ENST00000567379 FAM222AQ5U5X8 452 aa7.72□□□□□ -1.17
VPS9D1-206ENST00000567379 C20orf203Q8NBC4 194 aa7.72□□□□□ -1.17
VPS9D1-206ENST00000567379 TIMM17AQ99595 171 aa7.72□□□□□ -1.17
VPS9D1-206ENST00000567379 PRADC1Q9BSG0 188 aa7.72□□□□□ -1.17
VPS9D1-206ENST00000567379 ZMAT4Q9H898 229 aa7.72□□□□□ -1.17
VPS9D1-206ENST00000567379 A0A087WX48 190 aa7.71□□□□□ -1.18
VPS9D1-206ENST00000567379 RPL39P62891 51 aaKnown RBP7.71□□□□□ -1.18
VPS9D1-206ENST00000567379 ODF1Q14990 250 aa7.71□□□□□ -1.18
VPS9D1-206ENST00000567379 DAZ4Q86SG3 579 aaKnown RBP7.71□□□□□ -1.18
VPS9D1-206ENST00000567379 Q8NAQ8 132 aa7.71□□□□□ -1.18
VPS9D1-206ENST00000567379 PHLDA1Q8WV24 401 aaPredicted RBP7.71□□□□□ -1.18
VPS9D1-206ENST00000567379 DAZ3Q9NR90 486 aaKnown RBP7.71□□□□□ -1.18
VPS9D1-206ENST00000567379 DKK2Q9UBU2 259 aa7.71□□□□□ -1.18
VPS9D1-206ENST00000567379 Q9UF83 564 aa7.71□□□□□ -1.18
VPS9D1-206ENST00000567379 IGHV3-38A0A0C4DH36 116 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 hDV102S1A0JD36 115 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 GAGE12JA6NER3 117 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 IGIPA6NJ69 53 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 DPM2O94777 84 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 SPART-AS1P0CW21 52 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 DDTP30046 118 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 UBE2D3P61077 147 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 DAD1P61803 113 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 UBE2D2P62837 147 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 GAGE1Q13065 139 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 GAGE4Q13068 117 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 GAGE5Q13069 117 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 MAJINQ3KP22 176 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 GAGE13Q4V321 117 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 BAALCQ8WXS3 180 aa7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 CHTOPQ9Y3Y2 248 aaKnown RBP7.7□□□□□ -1.18
VPS9D1-206ENST00000567379 TEX48A0A1B0GUV7 120 aa7.69□□□□□ -1.18
VPS9D1-206ENST00000567379 DEFB4AO15263 64 aa7.69□□□□□ -1.18
VPS9D1-206ENST00000567379 IGKCP01834 107 aa7.69□□□□□ -1.18
VPS9D1-206ENST00000567379 PAPPA-AS1Q5QFB9 102 aa7.69□□□□□ -1.18
VPS9D1-206ENST00000567379 MIEN1Q9BRT3 115 aa7.69□□□□□ -1.18
VPS9D1-206ENST00000567379 HHLA3Q9XRX5 114 aa7.69□□□□□ -1.18
VPS9D1-206ENST00000567379 BIRC6Q9NR09 4857 aa7.68□□□□□ -1.18
VPS9D1-206ENST00000567379 PRSS29PA6NIE9 313 aa7.68□□□□□ -1.18
VPS9D1-206ENST00000567379 F8VRH5 84 aa7.68□□□□□ -1.18
VPS9D1-206ENST00000567379 PLNP26678 52 aa7.68□□□□□ -1.18
VPS9D1-206ENST00000567379 PMVKQ15126 192 aa7.68□□□□□ -1.18
VPS9D1-206ENST00000567379 CHCHD7Q9BUK0 85 aa7.68□□□□□ -1.18
VPS9D1-206ENST00000567379 SPANXA1Q9NS26 97 aa7.68□□□□□ -1.18
VPS9D1-206ENST00000567379 MRPL35Q9NZE8 188 aaKnown RBP7.68□□□□□ -1.18
VPS9D1-206ENST00000567379 UQCR10Q9UDW1 63 aa7.68□□□□□ -1.18
VPS9D1-206ENST00000567379 PYGO1Q9Y3Y4 419 aa7.68□□□□□ -1.18
VPS9D1-206ENST00000567379 LINC00587B1AMM8 73 aa7.67□□□□□ -1.18
VPS9D1-206ENST00000567379 NPSP0C0P6 89 aa7.67□□□□□ -1.18
VPS9D1-206ENST00000567379 IGLC3P0DOY3 106 aa7.67□□□□□ -1.18
VPS9D1-206ENST00000567379 SMAGPQ0VAQ4 97 aa7.67□□□□□ -1.18
VPS9D1-206ENST00000567379 PRO0255Q9UI72 69 aa7.67□□□□□ -1.18
VPS9D1-206ENST00000567379 LOC100131303A0A0U1RQF7 123 aa7.66□□□□□ -1.18
VPS9D1-206ENST00000567379 ATP5G1P05496 136 aa7.66□□□□□ -1.18
VPS9D1-206ENST00000567379 CRYBA4P53673 196 aa7.66□□□□□ -1.18
VPS9D1-206ENST00000567379 TMEM97Q5BJF2 176 aa7.66□□□□□ -1.18
VPS9D1-206ENST00000567379 GTSF1LQ9H1H1 148 aa7.66□□□□□ -1.18
VPS9D1-206ENST00000567379 VCX2Q9H322 139 aa7.66□□□□□ -1.18
VPS9D1-206ENST00000567379 CST9LQ9H4G1 147 aa7.66□□□□□ -1.18
VPS9D1-206ENST00000567379 IGLV4-3A0A075B6K6 122 aa7.65□□□□□ -1.18
VPS9D1-206ENST00000567379 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.65□□□□□ -1.18
VPS9D1-206ENST00000567379 IGKV2-29A2NJV5 120 aaPredicted RBP7.65□□□□□ -1.18
VPS9D1-206ENST00000567379 PAX4O43316 350 aa7.65□□□□□ -1.18
VPS9D1-206ENST00000567379 GYPEP15421 78 aa7.65□□□□□ -1.18
VPS9D1-206ENST00000567379 STPG4Q8N801 248 aa7.65□□□□□ -1.18
VPS9D1-206ENST00000567379 C14orf144Q96I85 54 aa7.65□□□□□ -1.18
VPS9D1-206ENST00000567379 TIMM21Q9BVV7 248 aa7.65□□□□□ -1.18
VPS9D1-206ENST00000567379 RETNQ9HD89 108 aa7.65□□□□□ -1.18
VPS9D1-206ENST00000567379 CELA1Q9UNI1 258 aa7.65□□□□□ -1.18
VPS9D1-206ENST00000567379 TRBV25-1A0A075B6N4 114 aa7.64□□□□□ -1.19
VPS9D1-206ENST00000567379 UBE2L6O14933 153 aa7.64□□□□□ -1.19
VPS9D1-206ENST00000567379 LINC00694P0DN24 101 aa7.64□□□□□ -1.19
VPS9D1-206ENST00000567379 ANKRD39Q53RE8 183 aa7.64□□□□□ -1.19
VPS9D1-206ENST00000567379 KPRPQ5T749 579 aaPredicted RBP7.64□□□□□ -1.19
VPS9D1-206ENST00000567379 DGAT2L7PQ6IED9 249 aa7.64□□□□□ -1.19
VPS9D1-206ENST00000567379 SLC25A34Q6PIV7 304 aa7.64□□□□□ -1.19
VPS9D1-206ENST00000567379 OPRPNQ99935 248 aaPredicted RBP7.64□□□□□ -1.19
VPS9D1-206ENST00000567379 TMEM243Q9BU79 118 aa7.64□□□□□ -1.19
VPS9D1-206ENST00000567379 UBE2D4Q9Y2X8 147 aa7.64□□□□□ -1.19
VPS9D1-206ENST00000567379 F5H768 121 aa7.63□□□□□ -1.19
VPS9D1-206ENST00000567379 H7C423 109 aa7.63□□□□□ -1.19
VPS9D1-206ENST00000567379 COX8AP10176 69 aa7.63□□□□□ -1.19
VPS9D1-206ENST00000567379 HNRNPA3P51991 378 aaKnown RBP7.63□□□□□ -1.19
VPS9D1-206ENST00000567379 ZC2HC1BQ5TFG8 222 aa7.63□□□□□ -1.19
VPS9D1-206ENST00000567379 NTM-AS1Q6ZSK4 140 aa7.63□□□□□ -1.19
VPS9D1-206ENST00000567379 ATP6V0E2Q8NHE4 81 aa7.63□□□□□ -1.19
VPS9D1-206ENST00000567379 C11orf68Q9H3H3 251 aaKnown RBP7.63□□□□□ -1.19
VPS9D1-206ENST00000567379 K7EIL1 84 aa7.62□□□□□ -1.19
VPS9D1-206ENST00000567379 MRPS36P82909 103 aaKnown RBP7.62□□□□□ -1.19
VPS9D1-206ENST00000567379 DEFB121Q5J5C9 76 aa7.62□□□□□ -1.19
VPS9D1-206ENST00000567379 AMMECR1LQ6DCA0 310 aa7.62□□□□□ -1.19
VPS9D1-206ENST00000567379 MRPL52Q86TS9 123 aaKnown RBP7.62□□□□□ -1.19
VPS9D1-206ENST00000567379 SBSPONQ8IVN8 264 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms