RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 CTXND1A0A1B0GTU2 59 aa10.13□□□□□ -0.79
CDH3-205ENST00000566808 A0A1W2PNN7 141 aa10.13□□□□□ -0.79
CDH3-205ENST00000566808 SYCNQ0VAF6 134 aa10.13□□□□□ -0.79
CDH3-205ENST00000566808 RASL11AQ6T310 242 aa10.13□□□□□ -0.79
CDH3-205ENST00000566808 ENKURQ8TC29 256 aa10.13□□□□□ -0.79
CDH3-205ENST00000566808 FSIP2Q5CZC0 6907 aa10.13□□□□□ -0.79
CDH3-205ENST00000566808 IGLV7-43P04211 117 aa10.12□□□□□ -0.79
CDH3-205ENST00000566808 RPL13AP40429 203 aaKnown RBP10.12□□□□□ -0.79
CDH3-205ENST00000566808 AKR1C3P42330 323 aa10.12□□□□□ -0.79
CDH3-205ENST00000566808 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
CDH3-205ENST00000566808 ZNF726P1Q15940 193 aa10.12□□□□□ -0.79
CDH3-205ENST00000566808 TRAV1-1A0A0B4J248 108 aa10.11□□□□□ -0.79
CDH3-205ENST00000566808 UBE2D1P51668 147 aa10.11□□□□□ -0.79
CDH3-205ENST00000566808 AMMECR1LQ6DCA0 310 aa10.11□□□□□ -0.79
CDH3-205ENST00000566808 KRTAP1-4P0C5Y4 121 aa10.1□□□□□ -0.79
CDH3-205ENST00000566808 C9orf116Q5BN46 136 aaPredicted RBP10.1□□□□□ -0.79
CDH3-205ENST00000566808 NIT2Q9NQR4 276 aa10.1□□□□□ -0.79
CDH3-205ENST00000566808 ZNF561-AS1K7EIQ3 104 aa10.09□□□□□ -0.79
CDH3-205ENST00000566808 XCL1P47992 114 aa10.09□□□□□ -0.79
CDH3-205ENST00000566808 STOML3Q8TAV4 291 aa10.09□□□□□ -0.79
CDH3-205ENST00000566808 ISOC2Q96AB3 205 aa10.09□□□□□ -0.79
CDH3-205ENST00000566808 SSNA1O43805 119 aa10.08□□□□□ -0.8
CDH3-205ENST00000566808 FGF6P10767 208 aa10.08□□□□□ -0.8
CDH3-205ENST00000566808 FHITP49789 147 aa10.08□□□□□ -0.8
CDH3-205ENST00000566808 CAMPP49913 170 aa10.08□□□□□ -0.8
CDH3-205ENST00000566808 CRCT1Q9UGL9 99 aa10.08□□□□□ -0.8
CDH3-205ENST00000566808 EIF5AP63241 154 aaKnown RBP10.07□□□□□ -0.8
CDH3-205ENST00000566808 RNASEKQ6P5S7 137 aaKnown RBP10.07□□□□□ -0.8
CDH3-205ENST00000566808 PHF5AQ7RTV0 110 aaKnown RBP10.07□□□□□ -0.8
CDH3-205ENST00000566808 OR5A1Q8NGJ0 315 aa10.07□□□□□ -0.8
CDH3-205ENST00000566808 MLST8Q9BVC4 326 aa10.07□□□□□ -0.8
CDH3-205ENST00000566808 INMT-MINDY4F8WBC2 141 aa10.06□□□□□ -0.8
CDH3-205ENST00000566808 CCL25O15444 150 aa10.06□□□□□ -0.8
CDH3-205ENST00000566808 APOMO95445 188 aa10.06□□□□□ -0.8
CDH3-205ENST00000566808 BCL2P10415 239 aa10.06□□□□□ -0.8
CDH3-205ENST00000566808 LCE2DQ5TA82 110 aaPredicted RBP10.06□□□□□ -0.8
CDH3-205ENST00000566808 H7C423 109 aa10.05□□□□□ -0.8
CDH3-205ENST00000566808 S100A9P06702 114 aaKnown RBP10.05□□□□□ -0.8
CDH3-205ENST00000566808 CST9LP1Q5W188 147 aa10.05□□□□□ -0.8
CDH3-205ENST00000566808 ZNF25P17030 456 aaPredicted RBP10.04□□□□□ -0.8
CDH3-205ENST00000566808 NTF3P20783 257 aa10.04□□□□□ -0.8
CDH3-205ENST00000566808 TSKUQ8WUA8 353 aa10.04□□□□□ -0.8
CDH3-205ENST00000566808 TPPP3Q9BW30 176 aa10.04□□□□□ -0.8
CDH3-205ENST00000566808 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
CDH3-205ENST00000566808 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.03□□□□□ -0.8
CDH3-205ENST00000566808 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
CDH3-205ENST00000566808 IGKV2-29A2NJV5 120 aaPredicted RBP10.03□□□□□ -0.8
CDH3-205ENST00000566808 MAP1LC3B2A6NCE7 125 aa10.03□□□□□ -0.8
CDH3-205ENST00000566808 NCR2O95944 276 aa10.03□□□□□ -0.8
CDH3-205ENST00000566808 IGLC6P0CF74 106 aa10.03□□□□□ -0.8
CDH3-205ENST00000566808 NUP35Q8NFH5 326 aa10.03□□□□□ -0.8
CDH3-205ENST00000566808 MAP1LC3BQ9GZQ8 125 aa10.03□□□□□ -0.8
CDH3-205ENST00000566808 A0A087WZ39 114 aa10.02□□□□□ -0.81
CDH3-205ENST00000566808 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.02□□□□□ -0.81
CDH3-205ENST00000566808 APCSP02743 223 aa10.02□□□□□ -0.81
CDH3-205ENST00000566808 TRGC1P0CF51 173 aa10.02□□□□□ -0.81
CDH3-205ENST00000566808 MEF2BQ02080 365 aaPredicted RBP10.02□□□□□ -0.81
CDH3-205ENST00000566808 RPL18AQ02543 176 aaKnown RBP10.02□□□□□ -0.81
CDH3-205ENST00000566808 BAGE2Q86Y30 109 aa10.02□□□□□ -0.81
CDH3-205ENST00000566808 AKR1C8PQ5T2L2 129 aa10.01□□□□□ -0.81
CDH3-205ENST00000566808 CD164L2Q6UWJ8 174 aa10.01□□□□□ -0.81
CDH3-205ENST00000566808 Q6ZNX1 250 aa10.01□□□□□ -0.81
CDH3-205ENST00000566808 MARVELD1Q9BSK0 173 aa10.01□□□□□ -0.81
CDH3-205ENST00000566808 CARHSP1Q9Y2V2 147 aaKnown RBP10.01□□□□□ -0.81
CDH3-205ENST00000566808 BTF3L4Q96K17 158 aa10□□□□□ -0.81
CDH3-205ENST00000566808 CAMK2N2Q96S95 79 aa10□□□□□ -0.81
CDH3-205ENST00000566808 SS18Q15532 418 aa9.99□□□□□ -0.81
CDH3-205ENST00000566808 RPL7L1Q6DKI1 246 aaKnown RBP9.99□□□□□ -0.81
CDH3-205ENST00000566808 TMEM101Q96IK0 257 aa9.99□□□□□ -0.81
CDH3-205ENST00000566808 MUC17Q685J3 4493 aa9.99□□□□□ -0.81
CDH3-205ENST00000566808 BORCS7-ASMTA0A0B4J1R7 106 aa9.98□□□□□ -0.81
CDH3-205ENST00000566808 SCO2A0A1W2PP80 73 aa9.98□□□□□ -0.81
CDH3-205ENST00000566808 TSPAN13O95857 204 aa9.98□□□□□ -0.81
CDH3-205ENST00000566808 EIF5AL1Q6IS14 154 aaKnown RBP9.98□□□□□ -0.81
CDH3-205ENST00000566808 RPS20P60866 119 aaKnown RBP9.97□□□□□ -0.81
CDH3-205ENST00000566808 KRTAP11-1Q8IUC1 163 aa9.97□□□□□ -0.81
CDH3-205ENST00000566808 OR2D3Q8NGH3 330 aa9.97□□□□□ -0.81
CDH3-205ENST00000566808 F2Z2F3 143 aa9.96□□□□□ -0.82
CDH3-205ENST00000566808 PAGE4O60829 102 aa9.96□□□□□ -0.82
CDH3-205ENST00000566808 MALP21145 153 aa9.96□□□□□ -0.82
CDH3-205ENST00000566808 C2orf48Q96LS8 159 aa9.96□□□□□ -0.82
CDH3-205ENST00000566808 BCL2L11O43521 198 aa9.95□□□□□ -0.82
CDH3-205ENST00000566808 PFDN1O60925 122 aa9.95□□□□□ -0.82
CDH3-205ENST00000566808 GATD1Q8NB37 220 aa9.95□□□□□ -0.82
CDH3-205ENST00000566808 UPK1BO75841 260 aa9.94□□□□□ -0.82
CDH3-205ENST00000566808 XKRY2A2RUG3 117 aa9.93□□□□□ -0.82
CDH3-205ENST00000566808 C19orf71A6NCJ1 209 aa9.93□□□□□ -0.82
CDH3-205ENST00000566808 COX7A2LO14548 114 aa9.93□□□□□ -0.82
CDH3-205ENST00000566808 ESDP10768 282 aa9.93□□□□□ -0.82
CDH3-205ENST00000566808 RNF151Q2KHN1 245 aa9.93□□□□□ -0.82
CDH3-205ENST00000566808 LINC00299Q6ZSB3 139 aa9.92□□□□□ -0.82
CDH3-205ENST00000566808 S100ZQ8WXG8 99 aa9.92□□□□□ -0.82
CDH3-205ENST00000566808 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
CDH3-205ENST00000566808 OPRPNQ99935 248 aaPredicted RBP9.92□□□□□ -0.82
CDH3-205ENST00000566808 CDIP1Q9H305 208 aa9.92□□□□□ -0.82
CDH3-205ENST00000566808 RPP21Q9H633 154 aaKnown RBP9.92□□□□□ -0.82
CDH3-205ENST00000566808 FAM168BA1KXE4 195 aa9.91□□□□□ -0.82
CDH3-205ENST00000566808 SDHAF1A6NFY7 115 aa9.91□□□□□ -0.82
CDH3-205ENST00000566808 RPL35P42766 123 aaKnown RBP9.91□□□□□ -0.82
CDH3-205ENST00000566808 TPRXLQ17RH7 258 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms