RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TRBV27A0A0K0K1C4 114 aa7.75□□□□□ -1.17
SF3B3-205ENST00000564899 VCYO14598 125 aa7.75□□□□□ -1.17
SF3B3-205ENST00000564899 COA6Q5JTJ3 125 aaKnown RBP7.75□□□□□ -1.17
SF3B3-205ENST00000564899 URB1-AS1Q96HZ7 61 aa7.75□□□□□ -1.17
SF3B3-205ENST00000564899 VSIG2Q96IQ7 327 aa7.75□□□□□ -1.17
SF3B3-205ENST00000564899 LINC00614P0C842 121 aa7.74□□□□□ -1.17
SF3B3-205ENST00000564899 LINC00694P0DN24 101 aa7.74□□□□□ -1.17
SF3B3-205ENST00000564899 LINC00310P59036 64 aa7.74□□□□□ -1.17
SF3B3-205ENST00000564899 UBE2D3P61077 147 aa7.74□□□□□ -1.17
SF3B3-205ENST00000564899 UBE2D2P62837 147 aa7.74□□□□□ -1.17
SF3B3-205ENST00000564899 PHLDA1Q8WV24 401 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-205ENST00000564899 CHCHD1Q96BP2 118 aaKnown RBP7.74□□□□□ -1.17
SF3B3-205ENST00000564899 KIR2DL4Q99706 377 aa7.74□□□□□ -1.17
SF3B3-205ENST00000564899 AP5S1Q9NUS5 200 aa7.74□□□□□ -1.17
SF3B3-205ENST00000564899 IGHV3-38A0A0C4DH36 116 aa7.73□□□□□ -1.17
SF3B3-205ENST00000564899 I3L3M4 83 aa7.73□□□□□ -1.17
SF3B3-205ENST00000564899 TCAPO15273 167 aa7.73□□□□□ -1.17
SF3B3-205ENST00000564899 HSBP1O75506 76 aa7.73□□□□□ -1.17
SF3B3-205ENST00000564899 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
SF3B3-205ENST00000564899 DEFB104AQ8WTQ1 72 aa7.73□□□□□ -1.17
SF3B3-205ENST00000564899 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
SF3B3-205ENST00000564899 LINC01546A6NGU7 62 aa7.72□□□□□ -1.17
SF3B3-205ENST00000564899 H3BNG1 76 aa7.72□□□□□ -1.17
SF3B3-205ENST00000564899 NUPR1O60356 82 aa7.72□□□□□ -1.17
SF3B3-205ENST00000564899 FCER1GP30273 86 aa7.72□□□□□ -1.17
SF3B3-205ENST00000564899 SNRPEP62304 92 aaKnown RBP7.72□□□□□ -1.17
SF3B3-205ENST00000564899 COTL1Q14019 142 aa7.72□□□□□ -1.17
SF3B3-205ENST00000564899 LAGE3Q14657 143 aa7.72□□□□□ -1.17
SF3B3-205ENST00000564899 ICOSQ9Y6W8 199 aa7.72□□□□□ -1.17
SF3B3-205ENST00000564899 FAT2Q9NYQ8 4349 aa7.72□□□□□ -1.17
SF3B3-205ENST00000564899 DNAH2Q9P225 4427 aa7.71□□□□□ -1.17
SF3B3-205ENST00000564899 DNAH6Q9C0G6 4158 aa7.71□□□□□ -1.18
SF3B3-205ENST00000564899 A0A096LPF7 62 aa7.71□□□□□ -1.18
SF3B3-205ENST00000564899 C5orf52A6NGY3 159 aa7.71□□□□□ -1.18
SF3B3-205ENST00000564899 K7EMI3 77 aa7.71□□□□□ -1.18
SF3B3-205ENST00000564899 TSHBP01222 138 aa7.71□□□□□ -1.18
SF3B3-205ENST00000564899 ESDP10768 282 aa7.71□□□□□ -1.18
SF3B3-205ENST00000564899 MRPL23Q16540 153 aaKnown RBP7.71□□□□□ -1.18
SF3B3-205ENST00000564899 ORMDL2Q53FV1 153 aa7.71□□□□□ -1.18
SF3B3-205ENST00000564899 PDZD11Q5EBL8 140 aa7.71□□□□□ -1.18
SF3B3-205ENST00000564899 ATP6V0E2Q8NHE4 81 aa7.71□□□□□ -1.18
SF3B3-205ENST00000564899 DYNC1H1Q14204 4646 aaKnown RBP7.7□□□□□ -1.18
SF3B3-205ENST00000564899 IGHV1-24A0A0C4DH33 117 aa7.7□□□□□ -1.18
SF3B3-205ENST00000564899 NUDT3O95989 172 aa7.7□□□□□ -1.18
SF3B3-205ENST00000564899 AMTP48728 403 aa7.7□□□□□ -1.18
SF3B3-205ENST00000564899 PMCHL1Q16048 86 aa7.7□□□□□ -1.18
SF3B3-205ENST00000564899 HIST3H2BBQ8N257 126 aa7.7□□□□□ -1.18
SF3B3-205ENST00000564899 LINC00476Q8WZB0 136 aa7.7□□□□□ -1.18
SF3B3-205ENST00000564899 HBDP02042 147 aa7.69□□□□□ -1.18
SF3B3-205ENST00000564899 BTF3P20290 206 aaKnown RBP7.69□□□□□ -1.18
SF3B3-205ENST00000564899 S100A2P29034 98 aa7.69□□□□□ -1.18
SF3B3-205ENST00000564899 SH2D6Q7Z4S9 175 aa7.69□□□□□ -1.18
SF3B3-205ENST00000564899 FAM19A2Q8N3H0 131 aa7.69□□□□□ -1.18
SF3B3-205ENST00000564899 TMEM97Q5BJF2 176 aa7.68□□□□□ -1.18
SF3B3-205ENST00000564899 NTM-AS1Q6ZSK4 140 aa7.68□□□□□ -1.18
SF3B3-205ENST00000564899 C15orf53Q8NAA6 179 aa7.68□□□□□ -1.18
SF3B3-205ENST00000564899 GTSF1LQ9H1H1 148 aa7.68□□□□□ -1.18
SF3B3-205ENST00000564899 A0A096LNJ9 63 aa7.67□□□□□ -1.18
SF3B3-205ENST00000564899 TRBV6-8A0A0A6YYG3 113 aa7.67□□□□□ -1.18
SF3B3-205ENST00000564899 IGLL5B9A064 214 aa7.67□□□□□ -1.18
SF3B3-205ENST00000564899 G0S2P27469 103 aa7.67□□□□□ -1.18
SF3B3-205ENST00000564899 TMEM18Q96B42 140 aa7.67□□□□□ -1.18
SF3B3-205ENST00000564899 CHCHD7Q9BUK0 85 aa7.67□□□□□ -1.18
SF3B3-205ENST00000564899 TRBV25-1A0A075B6N4 114 aa7.66□□□□□ -1.18
SF3B3-205ENST00000564899 NUPR2A6NF83 97 aa7.66□□□□□ -1.18
SF3B3-205ENST00000564899 LY6G6CO95867 125 aa7.66□□□□□ -1.18
SF3B3-205ENST00000564899 CEMP1Q6PRD7 247 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-205ENST00000564899 C2orf66Q6UXQ4 117 aa7.66□□□□□ -1.18
SF3B3-205ENST00000564899 C20orf203Q8NBC4 194 aa7.66□□□□□ -1.18
SF3B3-205ENST00000564899 HIST1H2BLQ99880 126 aa7.66□□□□□ -1.18
SF3B3-205ENST00000564899 TMEM243Q9BU79 118 aa7.66□□□□□ -1.18
SF3B3-205ENST00000564899 CYSLTR1Q9Y271 337 aa7.66□□□□□ -1.18
SF3B3-205ENST00000564899 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.65□□□□□ -1.18
SF3B3-205ENST00000564899 IGKV2-29A2NJV5 120 aaPredicted RBP7.65□□□□□ -1.18
SF3B3-205ENST00000564899 IFITM10A6NMD0 228 aa7.65□□□□□ -1.18
SF3B3-205ENST00000564899 LEPROTL1O95214 131 aa7.65□□□□□ -1.18
SF3B3-205ENST00000564899 FABP4P15090 132 aa7.65□□□□□ -1.18
SF3B3-205ENST00000564899 RPL39P62891 51 aaKnown RBP7.65□□□□□ -1.18
SF3B3-205ENST00000564899 TOMM6Q96B49 74 aa7.65□□□□□ -1.18
SF3B3-205ENST00000564899 PACRGQ96M98 296 aaPredicted RBP7.65□□□□□ -1.18
SF3B3-205ENST00000564899 DNAH17Q9UFH2 4485 aa7.65□□□□□ -1.19
SF3B3-205ENST00000564899 DNAH11Q96DT5 4516 aa7.64□□□□□ -1.19
SF3B3-205ENST00000564899 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
SF3B3-205ENST00000564899 UBE2L6O14933 153 aa7.64□□□□□ -1.19
SF3B3-205ENST00000564899 TIRAPP58753 221 aa7.64□□□□□ -1.19
SF3B3-205ENST00000564899 LELP1Q5T871 98 aa7.64□□□□□ -1.19
SF3B3-205ENST00000564899 LYPD5Q6UWN5 251 aa7.64□□□□□ -1.19
SF3B3-205ENST00000564899 SCGB3A1Q96QR1 104 aa7.64□□□□□ -1.19
SF3B3-205ENST00000564899 CHCHD5Q9BSY4 110 aa7.64□□□□□ -1.19
SF3B3-205ENST00000564899 HSPB8Q9UJY1 196 aa7.64□□□□□ -1.19
SF3B3-205ENST00000564899 KLK5Q9Y337 293 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-205ENST00000564899 LINC00173Q6ZV60 143 aa7.63□□□□□ -1.19
SF3B3-205ENST00000564899 ATP5LO75964 103 aa7.62□□□□□ -1.19
SF3B3-205ENST00000564899 SMAGPQ0VAQ4 97 aa7.62□□□□□ -1.19
SF3B3-205ENST00000564899 GAGE6Q13070 117 aa7.62□□□□□ -1.19
SF3B3-205ENST00000564899 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-205ENST00000564899 H7C423 109 aa7.61□□□□□ -1.19
SF3B3-205ENST00000564899 FGF6P10767 208 aa7.61□□□□□ -1.19
SF3B3-205ENST00000564899 ESRGQ1W209 222 aa7.61□□□□□ -1.19
SF3B3-205ENST00000564899 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms