RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 M0R2P5 195 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 RBMY1A1P0DJD3 496 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 RBMY1CP0DJD4 496 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 RBMY1FQ15415 496 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 GTSCR1Q86UQ5 136 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 MYO9AB2RTY4 2548 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 IGKV2D-26A0A0A0MRZ7 120 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 RBMY1BA6NDE4 496 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 RBMY1EA6NEQ0 496 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 TAX1BP3O14907 124 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 RBMY1DP0C7P1 496 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 CD28P10747 220 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 HILS1P60008 231 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 NSUN5P1Q3KNT7 163 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 Q6ZSN1 163 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 TLN2Q9Y4G6 2542 aa5.29□□□□□ -1.56
HERPUD1-209ENST00000564678 AKAP9Q99996 3911 aa5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 I3L3M4 83 aa5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 M0QXV9 152 aa5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 INSP01308 110 aa5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 SEC61BP60468 96 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 PMVKQ15126 192 aa5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 MORN3Q6PF18 240 aaPredicted RBP5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 TP53TG1Q9Y2A0 90 aa5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 TRBV25-1A0A075B6N4 114 aa5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 TAL2Q16559 108 aa5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 ODF3L2Q3SX64 289 aa5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 LINC01587Q99440 93 aa5.28□□□□□ -1.56
HERPUD1-209ENST00000564678 SONP18583 2426 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-209ENST00000564678 CCDC168Q8NDH2 2452 aa5.27□□□□□ -1.57
HERPUD1-209ENST00000564678 OR11H12B2RN74 326 aa5.27□□□□□ -1.57
HERPUD1-209ENST00000564678 E9PLD3 99 aa5.27□□□□□ -1.57
HERPUD1-209ENST00000564678 H3BRM9 83 aa5.27□□□□□ -1.57
HERPUD1-209ENST00000564678 UFSP1Q6NVU6 142 aa5.27□□□□□ -1.57
HERPUD1-209ENST00000564678 NEGR1Q7Z3B1 354 aa5.27□□□□□ -1.57
HERPUD1-209ENST00000564678 PDZD2O15018 2839 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 TSHBP01222 138 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 HTN1P15515 57 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 RPL13AP40429 203 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 C20orf203Q8NBC4 194 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 C11orf72Q8NBR9 251 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 OR11H2Q8NH07 326 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 CST9LQ9H4G1 147 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 FLNAP21333 2647 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 CRYBA4P53673 196 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 XGP55808 180 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 TCTAP57738 103 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 VAMP3Q15836 100 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 DNAJC30Q96LL9 226 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 CHAC1Q9BUX1 264 aa5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 ANK3Q12955 4377 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-209ENST00000564678 TRAV8-6A0A0B4J262 113 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 P0DMU3 169 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 FAM231AP0DMU4 169 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 FAM231CP0DMU5 169 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 PROK1P58294 105 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 HERVK_113P61574 105 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 RPL39P62891 51 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 C5orf47Q569G3 176 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 CFAP126Q5VTH2 177 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 PYGO1Q9Y3Y4 419 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 MYMXA0A1B0GTQ4 84 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 CCL25O15444 150 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 IGLV1-51P01701 117 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 IGHV3-53P01767 116 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 Q6ZVH6 145 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 MAPKAPK5-AS1Q8N8E1 139 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 IL17DQ8TAD2 202 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 TTTY13Q9BZ97 58 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 RETNQ9HD89 108 aa5.25□□□□□ -1.57
HERPUD1-209ENST00000564678 IGLV4-69A0A075B6H9 119 aa5.24□□□□□ -1.57
HERPUD1-209ENST00000564678 C11orf86A6NJI1 115 aa5.24□□□□□ -1.57
HERPUD1-209ENST00000564678 SMIM13P0DJ93 91 aa5.24□□□□□ -1.57
HERPUD1-209ENST00000564678 LORP23490 312 aaPredicted RBP5.24□□□□□ -1.57
HERPUD1-209ENST00000564678 NFE4Q86UQ8 179 aa5.24□□□□□ -1.57
HERPUD1-209ENST00000564678 CEND1Q8N111 149 aa5.24□□□□□ -1.57
HERPUD1-209ENST00000564678 C1orf158Q8N1D5 194 aa5.24□□□□□ -1.57
HERPUD1-209ENST00000564678 XCL2Q9UBD3 114 aa5.24□□□□□ -1.57
HERPUD1-209ENST00000564678 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
HERPUD1-209ENST00000564678 PHLDA1Q8WV24 401 aaPredicted RBP5.23□□□□□ -1.57
HERPUD1-209ENST00000564678 NACAE9PAV3 2078 aa5.23□□□□□ -1.57
HERPUD1-209ENST00000564678 WNK1Q9H4A3 2382 aa5.23□□□□□ -1.57
HERPUD1-209ENST00000564678 SETXQ7Z333 2677 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-209ENST00000564678 NDUFA11Q86Y39 141 aa5.23□□□□□ -1.57
HERPUD1-209ENST00000564678 TMEM263Q8WUH6 116 aaKnown RBP5.23□□□□□ -1.57
HERPUD1-209ENST00000564678 PRADC1Q9BSG0 188 aa5.23□□□□□ -1.57
HERPUD1-209ENST00000564678 C1QTNF4Q9BXJ3 329 aa5.23□□□□□ -1.57
HERPUD1-209ENST00000564678 FLNBO75369 2602 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 IGHV3-73A0A0B4J1V6 119 aa5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 PRM2P04554 102 aa5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 AMMECR1LQ6DCA0 310 aa5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 ACANP16112 2415 aa5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 IGLV4-3A0A075B6K6 122 aa5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 AZU1P20160 251 aa5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 FXYD2P54710 66 aa5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 DAZ2Q13117 558 aaKnown RBP5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 GTF2H5Q6ZYL4 71 aa5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 AMELXQ99217 191 aa5.22□□□□□ -1.57
HERPUD1-209ENST00000564678 HIST1H4GQ99525 98 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms