RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 V9GYV3 84 aa8.23□□□□□ -1.09
CHRNA3-208ENST00000561128 PRSS1P07477 247 aa8.22□□□□□ -1.09
CHRNA3-208ENST00000561128 RPS10P46783 165 aaKnown RBP8.22□□□□□ -1.09
CHRNA3-208ENST00000561128 TMEM97Q5BJF2 176 aa8.22□□□□□ -1.09
CHRNA3-208ENST00000561128 CT83Q5H943 113 aa8.22□□□□□ -1.09
CHRNA3-208ENST00000561128 SCXQ7RTU7 201 aa8.22□□□□□ -1.09
CHRNA3-208ENST00000561128 ISOC2Q96AB3 205 aa8.22□□□□□ -1.09
CHRNA3-208ENST00000561128 COX11Q9Y6N1 276 aa8.22□□□□□ -1.09
CHRNA3-208ENST00000561128 DNAH8Q96JB1 4490 aa8.22□□□□□ -1.09
CHRNA3-208ENST00000561128 HIGD1CA8MV81 97 aa8.21□□□□□ -1.1
CHRNA3-208ENST00000561128 A8MWL6 223 aa8.21□□□□□ -1.1
CHRNA3-208ENST00000561128 AMTP48728 403 aa8.21□□□□□ -1.1
CHRNA3-208ENST00000561128 RPL23P62829 140 aaKnown RBP8.21□□□□□ -1.1
CHRNA3-208ENST00000561128 REG3AQ06141 175 aa8.21□□□□□ -1.1
CHRNA3-208ENST00000561128 MIAQ16674 131 aa8.21□□□□□ -1.1
CHRNA3-208ENST00000561128 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 IGKV2-29A2NJV5 120 aaPredicted RBP8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 SMKR1H3BMG3 65 aa8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 PANO1I0J062 215 aa8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 NDUFS6O75380 124 aaKnown RBP8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 NCR2O95944 276 aa8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 INAFM2P0DMQ5 153 aa8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 COTL1Q14019 142 aa8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 TEX261Q6UWH6 196 aa8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 TSKUQ8WUA8 353 aa8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 FRZBQ92765 325 aa8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 OSTCQ9NRP0 149 aa8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 VPS13BQ7Z7G8 4022 aa8.2□□□□□ -1.1
CHRNA3-208ENST00000561128 FAM231BA6NCW3 169 aa8.19□□□□□ -1.1
CHRNA3-208ENST00000561128 KRTAP10-4P60372 401 aaPredicted RBP8.19□□□□□ -1.1
CHRNA3-208ENST00000561128 AMN1Q8IY45 258 aa8.19□□□□□ -1.1
CHRNA3-208ENST00000561128 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.19□□□□□ -1.1
CHRNA3-208ENST00000561128 A0A1B0GUT8 65 aa8.18□□□□□ -1.1
CHRNA3-208ENST00000561128 SDHAF1A6NFY7 115 aa8.18□□□□□ -1.1
CHRNA3-208ENST00000561128 TSHBP01222 138 aa8.18□□□□□ -1.1
CHRNA3-208ENST00000561128 PKIAP61925 76 aa8.18□□□□□ -1.1
CHRNA3-208ENST00000561128 LINC00528Q8N1L1 170 aa8.18□□□□□ -1.1
CHRNA3-208ENST00000561128 NUP35Q8NFH5 326 aa8.18□□□□□ -1.1
CHRNA3-208ENST00000561128 TMEM242Q9NWH2 141 aa8.18□□□□□ -1.1
CHRNA3-208ENST00000561128 TRBV6-5A0A0K0K1A5 114 aa8.17□□□□□ -1.1
CHRNA3-208ENST00000561128 A0A1B0GUV1 79 aa8.17□□□□□ -1.1
CHRNA3-208ENST00000561128 SLPIP03973 132 aa8.17□□□□□ -1.1
CHRNA3-208ENST00000561128 RAB4AP20338 218 aa8.17□□□□□ -1.1
CHRNA3-208ENST00000561128 ADIRFQ15847 76 aa8.17□□□□□ -1.1
CHRNA3-208ENST00000561128 CIRBP-AS1Q8TBR5 109 aa8.17□□□□□ -1.1
CHRNA3-208ENST00000561128 IGKV3OR2-268A0A0C4DH90 116 aa8.16□□□□□ -1.1
CHRNA3-208ENST00000561128 TMEM241Q24JQ0 296 aa8.16□□□□□ -1.1
CHRNA3-208ENST00000561128 C15orf56Q8N910 161 aa8.16□□□□□ -1.1
CHRNA3-208ENST00000561128 TMEM191AQ9H0A3 160 aa8.16□□□□□ -1.1
CHRNA3-208ENST00000561128 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.16□□□□□ -1.1
CHRNA3-208ENST00000561128 SRRM2Q9UQ35 2752 aaKnown RBP8.16□□□□□ -1.1
CHRNA3-208ENST00000561128 UBE2L6O14933 153 aa8.15□□□□□ -1.1
CHRNA3-208ENST00000561128 ESDP10768 282 aa8.15□□□□□ -1.1
CHRNA3-208ENST00000561128 NRACQ8N912 160 aa8.15□□□□□ -1.1
CHRNA3-208ENST00000561128 CHAC1Q9BUX1 264 aa8.15□□□□□ -1.1
CHRNA3-208ENST00000561128 FLG2Q5D862 2391 aaPredicted RBP8.15□□□□□ -1.1
CHRNA3-208ENST00000561128 SMIM27A0A1W2PRY6 76 aa8.14□□□□□ -1.11
CHRNA3-208ENST00000561128 APCSP02743 223 aa8.14□□□□□ -1.11
CHRNA3-208ENST00000561128 FGF6P10767 208 aa8.14□□□□□ -1.11
CHRNA3-208ENST00000561128 SMIM15Q7Z3B0 74 aa8.14□□□□□ -1.11
CHRNA3-208ENST00000561128 NAT8Q9UHE5 227 aa8.14□□□□□ -1.11
CHRNA3-208ENST00000561128 GAGE12HA6NDE8 117 aa8.13□□□□□ -1.11
CHRNA3-208ENST00000561128 FAM229AH3BQW9 127 aa8.13□□□□□ -1.11
CHRNA3-208ENST00000561128 POLR2KP53803 58 aaKnown RBP8.13□□□□□ -1.11
CHRNA3-208ENST00000561128 C14orf177Q52M58 125 aa8.13□□□□□ -1.11
CHRNA3-208ENST00000561128 BORCS7Q96B45 105 aa8.13□□□□□ -1.11
CHRNA3-208ENST00000561128 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
CHRNA3-208ENST00000561128 I3L3M4 83 aa8.12□□□□□ -1.11
CHRNA3-208ENST00000561128 CHTF8P0CG12 524 aa8.12□□□□□ -1.11
CHRNA3-208ENST00000561128 PMCHP20382 165 aa8.12□□□□□ -1.11
CHRNA3-208ENST00000561128 MRPL51Q4U2R6 128 aaKnown RBP8.12□□□□□ -1.11
CHRNA3-208ENST00000561128 FAM74A3Q4VXF1 159 aa8.12□□□□□ -1.11
CHRNA3-208ENST00000561128 RNASEKQ6P5S7 137 aaKnown RBP8.12□□□□□ -1.11
CHRNA3-208ENST00000561128 C9orf163Q8N9P6 203 aa8.12□□□□□ -1.11
CHRNA3-208ENST00000561128 MRAP2Q96G30 205 aa8.12□□□□□ -1.11
CHRNA3-208ENST00000561128 ST20Q9HBF5 79 aa8.12□□□□□ -1.11
CHRNA3-208ENST00000561128 TRAV8-4A0A0B4J246 113 aa8.11□□□□□ -1.11
CHRNA3-208ENST00000561128 A0A1B0GXF2 115 aa8.11□□□□□ -1.11
CHRNA3-208ENST00000561128 hDV102S1A0JD36 115 aa8.11□□□□□ -1.11
CHRNA3-208ENST00000561128 FOXI1Q12951 378 aa8.11□□□□□ -1.11
CHRNA3-208ENST00000561128 RIGQ13278 110 aa8.11□□□□□ -1.11
CHRNA3-208ENST00000561128 PEA15Q15121 130 aa8.11□□□□□ -1.11
CHRNA3-208ENST00000561128 HIGD2BQ4VC39 106 aa8.11□□□□□ -1.11
CHRNA3-208ENST00000561128 SDIM1Q6ZPB5 146 aa8.11□□□□□ -1.11
CHRNA3-208ENST00000561128 CHCHD10Q8WYQ3 142 aaPredicted RBP8.11□□□□□ -1.11
CHRNA3-208ENST00000561128 NAT8BQ9UHF3 227 aa8.11□□□□□ -1.11
CHRNA3-208ENST00000561128 TRBV27A0A0K0K1C4 114 aa8.1□□□□□ -1.11
CHRNA3-208ENST00000561128 CAMPP49913 170 aa8.1□□□□□ -1.11
CHRNA3-208ENST00000561128 HNRNPA3P51991 378 aaKnown RBP8.1□□□□□ -1.11
CHRNA3-208ENST00000561128 CNBPP62633 177 aaKnown RBP8.1□□□□□ -1.11
CHRNA3-208ENST00000561128 RNASE13Q5GAN3 156 aaKnown RBP8.1□□□□□ -1.11
CHRNA3-208ENST00000561128 AMMECR1LQ6DCA0 310 aa8.1□□□□□ -1.11
CHRNA3-208ENST00000561128 MRPL54Q6P161 138 aaKnown RBP8.1□□□□□ -1.11
CHRNA3-208ENST00000561128 FAM104BQ5XKR9 115 aa8.09□□□□□ -1.11
CHRNA3-208ENST00000561128 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.11
CHRNA3-208ENST00000561128 H7C423 109 aa8.08□□□□□ -1.12
CHRNA3-208ENST00000561128 SUMO2P61956 95 aaKnown RBP8.08□□□□□ -1.12
CHRNA3-208ENST00000561128 MRPL52Q86TS9 123 aaKnown RBP8.08□□□□□ -1.12
CHRNA3-208ENST00000561128 OR5A1Q8NGJ0 315 aa8.08□□□□□ -1.12
CHRNA3-208ENST00000561128 FAM104AQ969W3 186 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms