RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 OXLD1Q5BKU9 147 aa8.01□□□□□ -1.13
CARMIL3-202ENST00000559694 SPANXB1Q9NS25 103 aaPredicted RBP8.01□□□□□ -1.13
CARMIL3-202ENST00000559694 Q8N1Y9 231 aa8.01□□□□□ -1.13
CARMIL3-202ENST00000559694 MAST4O15021 2626 aa8.01□□□□□ -1.13
CARMIL3-202ENST00000559694 ZNF625Q96I27 306 aaPredicted RBP8.01□□□□□ -1.13
CARMIL3-202ENST00000559694 IGKV2D-26A0A0A0MRZ7 120 aa8□□□□□ -1.13
CARMIL3-202ENST00000559694 TRAV13-1A0A0B4J241 112 aa8□□□□□ -1.13
CARMIL3-202ENST00000559694 E9PLD3 99 aa8□□□□□ -1.13
CARMIL3-202ENST00000559694 GAGE2AQ6NT46 116 aa8□□□□□ -1.13
CARMIL3-202ENST00000559694 CFAP161Q6P656 301 aa8□□□□□ -1.13
CARMIL3-202ENST00000559694 RPL39LQ96EH5 51 aaKnown RBP7.99□□□□□ -1.13
CARMIL3-202ENST00000559694 CITED1Q99966 193 aa7.99□□□□□ -1.13
CARMIL3-202ENST00000559694 PSCAO43653 123 aa7.99□□□□□ -1.13
CARMIL3-202ENST00000559694 ANKRD29Q8N6D5 301 aa7.99□□□□□ -1.13
CARMIL3-202ENST00000559694 RNF152Q8N8N0 203 aa7.99□□□□□ -1.13
CARMIL3-202ENST00000559694 RNF183Q96D59 192 aa7.99□□□□□ -1.13
CARMIL3-202ENST00000559694 CARD19Q96LW7 228 aa7.99□□□□□ -1.13
CARMIL3-202ENST00000559694 URB1-AS1Q96HZ7 61 aa7.99□□□□□ -1.13
CARMIL3-202ENST00000559694 PRB2P02812 416 aaPredicted RBP7.98□□□□□ -1.13
CARMIL3-202ENST00000559694 MT-ATP8P03928 68 aa7.98□□□□□ -1.13
CARMIL3-202ENST00000559694 HIST1H4AP62805 103 aaKnown RBP7.98□□□□□ -1.13
CARMIL3-202ENST00000559694 C16orf74Q96GX8 76 aa7.98□□□□□ -1.13
CARMIL3-202ENST00000559694 NDUFA12Q9UI09 145 aa7.98□□□□□ -1.13
CARMIL3-202ENST00000559694 A4D1N5 150 aa7.98□□□□□ -1.13
CARMIL3-202ENST00000559694 TM2D2Q9BX73 214 aa7.98□□□□□ -1.13
CARMIL3-202ENST00000559694 TRBV6-1A0A0K0K1D8 114 aa7.98□□□□□ -1.13
CARMIL3-202ENST00000559694 ATP5G1P05496 136 aa7.98□□□□□ -1.13
CARMIL3-202ENST00000559694 RBMY1BA6NDE4 496 aaKnown RBP7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 RBMY1EA6NEQ0 496 aaKnown RBP7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 RBMY1DP0C7P1 496 aaKnown RBP7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 RBMY1A1P0DJD3 496 aaKnown RBP7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 RBMY1CP0DJD4 496 aa7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 Q6ZUT4 128 aa7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 PRIMA1Q86XR5 153 aa7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 PRSS47A8MTI9 375 aa7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 CLUHP3Q96NS8 147 aa7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 DMXL2Q8TDJ6 3036 aa7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 RHOHQ15669 191 aa7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 C20orf173Q96LM9 149 aa7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 WFDC10AQ9H1F0 79 aa7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 MDFICQ9P1T7 246 aa7.97□□□□□ -1.13
CARMIL3-202ENST00000559694 LINC00158P58513 81 aa7.96□□□□□ -1.13
CARMIL3-202ENST00000559694 GATD1Q8NB37 220 aa7.96□□□□□ -1.14
CARMIL3-202ENST00000559694 ATP6V0E2Q8NHE4 81 aa7.96□□□□□ -1.14
CARMIL3-202ENST00000559694 SPTBN5Q9NRC6 3674 aaKnown RBP7.96□□□□□ -1.14
CARMIL3-202ENST00000559694 TRAV12-1A0A0B4J245 112 aa7.96□□□□□ -1.14
CARMIL3-202ENST00000559694 I3L3M4 83 aa7.96□□□□□ -1.14
CARMIL3-202ENST00000559694 ZNF80P51504 273 aaPredicted RBP7.96□□□□□ -1.14
CARMIL3-202ENST00000559694 UFSP1Q6NVU6 142 aa7.95□□□□□ -1.14
CARMIL3-202ENST00000559694 ZFP2Q6ZN57 461 aa7.95□□□□□ -1.14
CARMIL3-202ENST00000559694 MAPKAPK5-AS1Q8N8E1 139 aa7.95□□□□□ -1.14
CARMIL3-202ENST00000559694 TMEM243Q9BU79 118 aa7.95□□□□□ -1.14
CARMIL3-202ENST00000559694 C11orf68Q9H3H3 251 aaKnown RBP7.95□□□□□ -1.14
CARMIL3-202ENST00000559694 CRIP1P50238 77 aa7.95□□□□□ -1.14
CARMIL3-202ENST00000559694 FRYQ5TBA9 3013 aa7.95□□□□□ -1.14
CARMIL3-202ENST00000559694 EDN2P20800 178 aa7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 CRIP2P52943 208 aaPredicted RBP7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 LINC01620Q4KN68 170 aa7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 BAALCQ8WXS3 180 aa7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 RASL10AQ92737 203 aa7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 FREM2Q5SZK8 3169 aa7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 GYPEP15421 78 aa7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 MUSTN1Q8IVN3 82 aa7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 C16orf95Q9H693 158 aa7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 SETXQ7Z333 2677 aaKnown RBP7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 FAM110AQ9BQ89 295 aa7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 PROK1P58294 105 aa7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 RNASE13Q5GAN3 156 aaKnown RBP7.94□□□□□ -1.14
CARMIL3-202ENST00000559694 C11orf86A6NJI1 115 aa7.93□□□□□ -1.14
CARMIL3-202ENST00000559694 TCL1BO95988 128 aa7.93□□□□□ -1.14
CARMIL3-202ENST00000559694 INAFM2P0DMQ5 153 aa7.93□□□□□ -1.14
CARMIL3-202ENST00000559694 SPEGQ15772 3267 aa7.93□□□□□ -1.14
CARMIL3-202ENST00000559694 LEPROTO15243 131 aa7.93□□□□□ -1.14
CARMIL3-202ENST00000559694 RPL39P62891 51 aaKnown RBP7.93□□□□□ -1.14
CARMIL3-202ENST00000559694 SS18Q15532 418 aa7.93□□□□□ -1.14
CARMIL3-202ENST00000559694 BAHCC1Q9P281 2608 aa7.93□□□□□ -1.14
CARMIL3-202ENST00000559694 ANGP03950 147 aaKnown RBP7.92□□□□□ -1.14
CARMIL3-202ENST00000559694 TOMM6Q96B49 74 aa7.92□□□□□ -1.14
CARMIL3-202ENST00000559694 TMEM263Q8WUH6 116 aaKnown RBP7.92□□□□□ -1.14
CARMIL3-202ENST00000559694 IGLC6P0CF74 106 aa7.92□□□□□ -1.14
CARMIL3-202ENST00000559694 MRPL23Q16540 153 aaKnown RBP7.92□□□□□ -1.14
CARMIL3-202ENST00000559694 C6orf226Q5I0X4 101 aa7.92□□□□□ -1.14
CARMIL3-202ENST00000559694 A0A0J9YXV3 536 aa7.92□□□□□ -1.14
CARMIL3-202ENST00000559694 IGLV2-11P01706 119 aa7.92□□□□□ -1.14
CARMIL3-202ENST00000559694 JPT2Q9H910 190 aa7.92□□□□□ -1.14
CARMIL3-202ENST00000559694 BOD1L1Q8NFC6 3051 aa7.91□□□□□ -1.14
CARMIL3-202ENST00000559694 RS1O15537 224 aa7.91□□□□□ -1.14
CARMIL3-202ENST00000559694 HHLA3Q9XRX5 114 aa7.91□□□□□ -1.14
CARMIL3-202ENST00000559694 UNC79Q9P2D8 2635 aa7.91□□□□□ -1.14
CARMIL3-202ENST00000559694 F8W735 103 aaPredicted RBP7.91□□□□□ -1.14
CARMIL3-202ENST00000559694 MRGPRG-AS1Q2M3A8 158 aa7.91□□□□□ -1.14
CARMIL3-202ENST00000559694 CLPSL2Q6UWE3 100 aa7.91□□□□□ -1.14
CARMIL3-202ENST00000559694 FLNCQ14315 2725 aa7.91□□□□□ -1.14
CARMIL3-202ENST00000559694 FAM222AQ5U5X8 452 aa7.9□□□□□ -1.14
CARMIL3-202ENST00000559694 Q6ZQT7 251 aa7.9□□□□□ -1.14
CARMIL3-202ENST00000559694 Q6ZTI0 123 aa7.9□□□□□ -1.14
CARMIL3-202ENST00000559694 SPATA25Q9BR10 227 aa7.9□□□□□ -1.14
CARMIL3-202ENST00000559694 CCL18P55774 89 aa7.9□□□□□ -1.15
CARMIL3-202ENST00000559694 C11orf45Q8TAV5 145 aa7.9□□□□□ -1.15
CARMIL3-202ENST00000559694 DCANP1Q8TF63 244 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms