RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 TMEM218A2RU14 115 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 IFITM5A6NNB3 132 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 C17orf112F2Z3M2 114 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 M0R143 59 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 CCL25O15444 150 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 TRACP01848 142 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 CRPP02741 224 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 RBP4P02753 201 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 CD2P06729 351 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 HRES1P13985 223 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 ROMO1P60602 79 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 ZNF345Q14585 488 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 ZNF826PQ6ZT77 177 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 Q6ZUT4 128 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 ATOH7Q8N100 152 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 OR5AS1Q8N127 324 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 C10orf111Q8N326 155 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 LINC00471Q8N535 108 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 HYLS1Q96M11 299 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 LINC00167Q96N53 147 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 NABP2Q9BQ15 211 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 CST11Q9H112 138 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 RPL26L1Q9UNX3 145 aaKnown RBP1.92□□□□□ -2.1
LRRC28-212ENST00000558911 MPC1Q9Y5U8 109 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 MGAMO43451 1857 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 DNAH7Q8WXX0 4024 aa1.92□□□□□ -2.1
LRRC28-212ENST00000558911 NRXN2Q9P2S2 1712 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 CITO14578 2027 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 ANK3Q12955 4377 aaKnown RBP1.91□□□□□ -2.1
LRRC28-212ENST00000558911 IGLV2-18A0A075B6J9 118 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 TRAV12-2A0A075B6T6 113 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 TRAV30A0A087WSZ9 112 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 ODF3BA8MYP8 253 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 C5orf67F2Z3F1 127 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 IFNA17P01571 189 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 CCL4P13236 92 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 HIST1H1DP16402 221 aaKnown RBP1.91□□□□□ -2.1
LRRC28-212ENST00000558911 CKS2P33552 79 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 SSR2P43308 183 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 PKIAP61925 76 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 ERHP84090 104 aaKnown RBP1.91□□□□□ -2.1
LRRC28-212ENST00000558911 CDK6Q00534 326 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 ZNF791Q3KP31 576 aaPredicted RBP1.91□□□□□ -2.1
LRRC28-212ENST00000558911 DEFB134Q4QY38 66 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 SPANXN5Q5MJ07 72 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 LELP1Q5T871 98 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 C1orf134Q5TEV5 83 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 MIC13Q5XKP0 118 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 ACBD7Q8N6N7 88 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 OR2T35Q8NGX2 323 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 OR5AK2Q8NH90 309 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 C20orf166-AS1Q96NR2 134 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 SLC50A1Q9BRV3 221 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 SEC11CQ9BY50 192 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 RERGLQ9H628 205 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 C14orf132Q9NPU4 83 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 KNL1Q8NG31 2342 aa1.91□□□□□ -2.1
LRRC28-212ENST00000558911 AKAP6Q13023 2319 aa1.9□□□□□ -2.1
LRRC28-212ENST00000558911 IGLV4-60A0A075B6I1 120 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 PNMA8CA0A1B0GUJ8 204 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 A0A1W2PNM2 257 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 A6NN06 94 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 G3V3Q6 166 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 PITX3O75364 302 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 ETV6P41212 452 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 BTG2P78543 158 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 CATR1Q13166 79 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 MOBPQ13875 183 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 Q8N2B8 174 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 OR4X2Q8NGF9 303 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 OR8B3Q8NGG8 313 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 RAB37Q96AX2 223 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 MRPL57Q9BQC6 102 aaKnown RBP1.9□□□□□ -2.11
LRRC28-212ENST00000558911 CXCL16Q9H2A7 254 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 SAR1AQ9NR31 198 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 SPAG17Q6Q759 2223 aa1.9□□□□□ -2.11
LRRC28-212ENST00000558911 LRP1BQ9NZR2 4599 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 PCDH15Q96QU1 1955 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 LOC107984156A0A0G2JMH3 177 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 C3orf85A0A1B0GTC6 90 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 ZNF736B4DX44 427 aaPredicted RBP1.89□□□□□ -2.11
LRRC28-212ENST00000558911 M0R2P5 195 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 YPEL1O60688 119 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 KLF7O75840 302 aaPredicted RBP1.89□□□□□ -2.11
LRRC28-212ENST00000558911 PROSCO94903 275 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 ASAH2BP0C7U1 165 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 HSD52Q0P140 79 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 ZNF846Q147U1 533 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 IGFBP7Q16270 282 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 DEFB113Q30KQ7 82 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 MRPL54Q6P161 138 aaKnown RBP1.89□□□□□ -2.11
LRRC28-212ENST00000558911 GKN2Q86XP6 184 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 ARL17AQ8IVW1 177 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 FAM19A2Q8N3H0 131 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 COPS9Q8WXC6 57 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 MUCL1Q96DR8 90 aa1.89□□□□□ -2.11
LRRC28-212ENST00000558911 NAA60Q9H7X0 242 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms